RNA–Protein interactions for RNA: ENST00000474889.5

PTPRG-203, Transcript of protein tyrosine phosphatase, receptor type G, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPRG, Length 9,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Dendrite, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRG-203ENST00000474889 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.72
PTPRG-203ENST00000474889 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
PTPRG-203ENST00000474889 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
PTPRG-203ENST00000474889 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
PTPRG-203ENST00000474889 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
PTPRG-203ENST00000474889 NISCHQ9Y2I1 1504 aa17.38■□□□□ 0.37
PTPRG-203ENST00000474889 MYT1Q01538 1121 aa17.22■□□□□ 0.35
PTPRG-203ENST00000474889 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
PTPRG-203ENST00000474889 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
PTPRG-203ENST00000474889 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
PTPRG-203ENST00000474889 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
PTPRG-203ENST00000474889 ERICH6Q7L0X2 663 aa16.85■□□□□ 0.29
PTPRG-203ENST00000474889 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
PTPRG-203ENST00000474889 APLP2Q06481 763 aa16.77■□□□□ 0.28
PTPRG-203ENST00000474889 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
PTPRG-203ENST00000474889 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
PTPRG-203ENST00000474889 CHIC1Q5VXU3 224 aa16.65■□□□□ 0.26
PTPRG-203ENST00000474889 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
PTPRG-203ENST00000474889 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
PTPRG-203ENST00000474889 ABCC9O60706 1549 aa16.44■□□□□ 0.22
PTPRG-203ENST00000474889 NEFLP07196 543 aa16.4■□□□□ 0.22
PTPRG-203ENST00000474889 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPRG-203ENST00000474889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
PTPRG-203ENST00000474889 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
PTPRG-203ENST00000474889 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
PTPRG-203ENST00000474889 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
PTPRG-203ENST00000474889 FBLN2P98095 1184 aa16.11■□□□□ 0.17
PTPRG-203ENST00000474889 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
PTPRG-203ENST00000474889 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
PTPRG-203ENST00000474889 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
PTPRG-203ENST00000474889 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
PTPRG-203ENST00000474889 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.13
PTPRG-203ENST00000474889 ITGAEP38570 1179 aa15.79■□□□□ 0.12
PTPRG-203ENST00000474889 POLR3GLQ9BT43 218 aa15.75■□□□□ 0.11
PTPRG-203ENST00000474889 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
PTPRG-203ENST00000474889 CNGB1Q14028 1251 aaPredicted RBP15.74■□□□□ 0.11
PTPRG-203ENST00000474889 BCANQ96GW7 911 aa15.71■□□□□ 0.11
PTPRG-203ENST00000474889 ARID3CA6NKF2 412 aa15.71■□□□□ 0.1
PTPRG-203ENST00000474889 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
PTPRG-203ENST00000474889 TRIM26Q12899 539 aaPredicted RBP15.63■□□□□ 0.09
PTPRG-203ENST00000474889 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
PTPRG-203ENST00000474889 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
PTPRG-203ENST00000474889 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
PTPRG-203ENST00000474889 HRCP23327 699 aa15.42■□□□□ 0.06
PTPRG-203ENST00000474889 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
PTPRG-203ENST00000474889 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
PTPRG-203ENST00000474889 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
PTPRG-203ENST00000474889 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
PTPRG-203ENST00000474889 P3H3Q8IVL6 736 aa15.33■□□□□ 0.04
PTPRG-203ENST00000474889 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
PTPRG-203ENST00000474889 FAM50AQ14320 339 aaKnown RBP15.28■□□□□ 0.04
PTPRG-203ENST00000474889 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.04
PTPRG-203ENST00000474889 A0A0G2JS52 829 aa15.24■□□□□ 0.03
PTPRG-203ENST00000474889 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPRG-203ENST00000474889 ZNF777Q9ULD5 760 aaPredicted RBP15.23■□□□□ 0.03
PTPRG-203ENST00000474889 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
PTPRG-203ENST00000474889 ZBTB47Q9UFB7 747 aaPredicted RBP15.23■□□□□ 0.03
PTPRG-203ENST00000474889 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
PTPRG-203ENST00000474889 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
PTPRG-203ENST00000474889 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
PTPRG-203ENST00000474889 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
PTPRG-203ENST00000474889 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
PTPRG-203ENST00000474889 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
PTPRG-203ENST00000474889 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
PTPRG-203ENST00000474889 ARID4BQ4LE39 1312 aaPredicted RBP15.13■□□□□ 0.01
PTPRG-203ENST00000474889 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
PTPRG-203ENST00000474889 ANP32AP39687 249 aaKnown RBP15.08■□□□□ 0.01
PTPRG-203ENST00000474889 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
PTPRG-203ENST00000474889 ZBTB7CA1YPR0 619 aa15.04■□□□□ -0
PTPRG-203ENST00000474889 ANP32CO43423 234 aa15.03■□□□□ -0
PTPRG-203ENST00000474889 NEFMP07197 916 aa15.02■□□□□ -0
PTPRG-203ENST00000474889 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
PTPRG-203ENST00000474889 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
PTPRG-203ENST00000474889 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
PTPRG-203ENST00000474889 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
PTPRG-203ENST00000474889 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
PTPRG-203ENST00000474889 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
PTPRG-203ENST00000474889 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
PTPRG-203ENST00000474889 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
PTPRG-203ENST00000474889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPRG-203ENST00000474889 UPF2Q9HAU5 1272 aaKnown RBP14.88□□□□□ -0.03
PTPRG-203ENST00000474889 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
PTPRG-203ENST00000474889 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
PTPRG-203ENST00000474889 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
PTPRG-203ENST00000474889 HSP90AA1P07900 732 aaKnown RBP14.79□□□□□ -0.04
PTPRG-203ENST00000474889 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
PTPRG-203ENST00000474889 MLECQ14165 292 aa14.77□□□□□ -0.04
PTPRG-203ENST00000474889 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
PTPRG-203ENST00000474889 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
PTPRG-203ENST00000474889 TNNT2P45379 298 aaPredicted RBP14.7□□□□□ -0.06
PTPRG-203ENST00000474889 PPP1R15AO75807 674 aaPredicted RBP14.67□□□□□ -0.06
PTPRG-203ENST00000474889 LMOD2Q6P5Q4 547 aa14.63□□□□□ -0.07
PTPRG-203ENST00000474889 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
PTPRG-203ENST00000474889 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.62□□□□□ -0.07
PTPRG-203ENST00000474889 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
PTPRG-203ENST00000474889 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
PTPRG-203ENST00000474889 ARXQ96QS3 562 aa14.58□□□□□ -0.08
PTPRG-203ENST00000474889 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
PTPRG-203ENST00000474889 DDRGK1Q96HY6 314 aa14.54□□□□□ -0.08
PTPRG-203ENST00000474889 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms