RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
FGFR1-208ENST00000397108 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
FGFR1-208ENST00000397108 ABCC9O60706 1549 aa22.53■■□□□ 1.2
FGFR1-208ENST00000397108 NACADO15069 1562 aa21.77■■□□□ 1.08
FGFR1-208ENST00000397108 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
FGFR1-208ENST00000397108 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
FGFR1-208ENST00000397108 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
FGFR1-208ENST00000397108 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
FGFR1-208ENST00000397108 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
FGFR1-208ENST00000397108 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
FGFR1-208ENST00000397108 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
FGFR1-208ENST00000397108 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
FGFR1-208ENST00000397108 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.964e-6■□□□□ 9.3
FGFR1-208ENST00000397108 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
FGFR1-208ENST00000397108 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
FGFR1-208ENST00000397108 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
FGFR1-208ENST00000397108 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
FGFR1-208ENST00000397108 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
FGFR1-208ENST00000397108 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
FGFR1-208ENST00000397108 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
FGFR1-208ENST00000397108 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
FGFR1-208ENST00000397108 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
FGFR1-208ENST00000397108 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.8
FGFR1-208ENST00000397108 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
FGFR1-208ENST00000397108 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
FGFR1-208ENST00000397108 HMGXB3Q12766 1538 aa20■□□□□ 0.79
FGFR1-208ENST00000397108 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
FGFR1-208ENST00000397108 WIZO95785 1651 aa19.89■□□□□ 0.78
FGFR1-208ENST00000397108 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
FGFR1-208ENST00000397108 HRCP23327 699 aa19.79■□□□□ 0.76
FGFR1-208ENST00000397108 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
FGFR1-208ENST00000397108 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
FGFR1-208ENST00000397108 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
FGFR1-208ENST00000397108 NESP48681 1621 aa19.53■□□□□ 0.72
FGFR1-208ENST00000397108 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
FGFR1-208ENST00000397108 CADPSQ9ULU8 1353 aa19.46■□□□□ 0.71
FGFR1-208ENST00000397108 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
FGFR1-208ENST00000397108 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
FGFR1-208ENST00000397108 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
FGFR1-208ENST00000397108 CFTRP13569 1480 aa19.39■□□□□ 0.69
FGFR1-208ENST00000397108 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
FGFR1-208ENST00000397108 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
FGFR1-208ENST00000397108 PRDM2Q13029 1718 aa19.33■□□□□ 0.69
FGFR1-208ENST00000397108 THOC2Q8NI27 1593 aaKnown RBP19.28■□□□□ 0.68
FGFR1-208ENST00000397108 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
FGFR1-208ENST00000397108 CUX2O14529 1486 aa19.22■□□□□ 0.67
FGFR1-208ENST00000397108 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
FGFR1-208ENST00000397108 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
FGFR1-208ENST00000397108 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
FGFR1-208ENST00000397108 WDR62O43379 1518 aa19.14■□□□□ 0.65
FGFR1-208ENST00000397108 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
FGFR1-208ENST00000397108 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
FGFR1-208ENST00000397108 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
FGFR1-208ENST00000397108 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
FGFR1-208ENST00000397108 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
FGFR1-208ENST00000397108 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
FGFR1-208ENST00000397108 CUX1P39880 1505 aa18.85■□□□□ 0.61
FGFR1-208ENST00000397108 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
FGFR1-208ENST00000397108 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
FGFR1-208ENST00000397108 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
FGFR1-208ENST00000397108 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
FGFR1-208ENST00000397108 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
FGFR1-208ENST00000397108 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
FGFR1-208ENST00000397108 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
FGFR1-208ENST00000397108 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
FGFR1-208ENST00000397108 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
FGFR1-208ENST00000397108 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
FGFR1-208ENST00000397108 SOGA1O94964 1423 aa18.7■□□□□ 0.58
FGFR1-208ENST00000397108 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
FGFR1-208ENST00000397108 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
FGFR1-208ENST00000397108 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
FGFR1-208ENST00000397108 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
FGFR1-208ENST00000397108 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
FGFR1-208ENST00000397108 AQRO60306 1485 aaKnown RBP eCLIP18.6■□□□□ 0.57
FGFR1-208ENST00000397108 TDRD9Q8NDG6 1382 aaKnown RBP18.57■□□□□ 0.56
FGFR1-208ENST00000397108 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
FGFR1-208ENST00000397108 PBRM1Q86U86 1689 aa18.52■□□□□ 0.55
FGFR1-208ENST00000397108 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
FGFR1-208ENST00000397108 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
FGFR1-208ENST00000397108 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
FGFR1-208ENST00000397108 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
FGFR1-208ENST00000397108 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
FGFR1-208ENST00000397108 CHD1O14646 1710 aa18.44■□□□□ 0.54
FGFR1-208ENST00000397108 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
FGFR1-208ENST00000397108 MYT1Q01538 1121 aa18.41■□□□□ 0.54
FGFR1-208ENST00000397108 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.54
FGFR1-208ENST00000397108 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
FGFR1-208ENST00000397108 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
FGFR1-208ENST00000397108 ADAMTS12P58397 1594 aa18.36■□□□□ 0.53
FGFR1-208ENST00000397108 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
FGFR1-208ENST00000397108 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
FGFR1-208ENST00000397108 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
FGFR1-208ENST00000397108 FBLN2P98095 1184 aa18.32■□□□□ 0.52
FGFR1-208ENST00000397108 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
FGFR1-208ENST00000397108 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
FGFR1-208ENST00000397108 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
FGFR1-208ENST00000397108 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.52
FGFR1-208ENST00000397108 CUL7Q14999 1698 aa18.26■□□□□ 0.51
FGFR1-208ENST00000397108 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
FGFR1-208ENST00000397108 IGF1RP08069 1367 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms