RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
FGFR1-202ENST00000335922 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
FGFR1-202ENST00000335922 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
FGFR1-202ENST00000335922 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
FGFR1-202ENST00000335922 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
FGFR1-202ENST00000335922 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
FGFR1-202ENST00000335922 ABCC9O60706 1549 aa23.6■■□□□ 1.37
FGFR1-202ENST00000335922 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.35
FGFR1-202ENST00000335922 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
FGFR1-202ENST00000335922 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.34e-6■□□□□ 9.3
FGFR1-202ENST00000335922 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
FGFR1-202ENST00000335922 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
FGFR1-202ENST00000335922 HRCP23327 699 aa23.17■■□□□ 1.3
FGFR1-202ENST00000335922 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.3
FGFR1-202ENST00000335922 RANGAP1P46060 587 aaPredicted RBP22.96■■□□□ 1.27
FGFR1-202ENST00000335922 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
FGFR1-202ENST00000335922 TRIM26Q12899 539 aaPredicted RBP22.64■■□□□ 1.22
FGFR1-202ENST00000335922 APLP2Q06481 763 aa22.64■■□□□ 1.21
FGFR1-202ENST00000335922 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
FGFR1-202ENST00000335922 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
FGFR1-202ENST00000335922 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.2
FGFR1-202ENST00000335922 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
FGFR1-202ENST00000335922 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
FGFR1-202ENST00000335922 YTHDC1Q96MU7 727 aaKnown RBP22.31■■□□□ 1.16
FGFR1-202ENST00000335922 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
FGFR1-202ENST00000335922 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
FGFR1-202ENST00000335922 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
FGFR1-202ENST00000335922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
FGFR1-202ENST00000335922 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
FGFR1-202ENST00000335922 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
FGFR1-202ENST00000335922 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
FGFR1-202ENST00000335922 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
FGFR1-202ENST00000335922 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.08
FGFR1-202ENST00000335922 FBLN2P98095 1184 aa21.79■■□□□ 1.08
FGFR1-202ENST00000335922 ITGAEP38570 1179 aa21.73■■□□□ 1.07
FGFR1-202ENST00000335922 GTF3C3Q9Y5Q9 886 aa21.72■■□□□ 1.07
FGFR1-202ENST00000335922 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
FGFR1-202ENST00000335922 NACADO15069 1562 aa21.66■■□□□ 1.06
FGFR1-202ENST00000335922 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.06
FGFR1-202ENST00000335922 MYT1LQ9UL68 1186 aa21.58■■□□□ 1.05
FGFR1-202ENST00000335922 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
FGFR1-202ENST00000335922 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
FGFR1-202ENST00000335922 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
FGFR1-202ENST00000335922 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
FGFR1-202ENST00000335922 MYT1Q01538 1121 aa21.44■■□□□ 1.02
FGFR1-202ENST00000335922 ARID3CA6NKF2 412 aa21.43■■□□□ 1.02
FGFR1-202ENST00000335922 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
FGFR1-202ENST00000335922 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
FGFR1-202ENST00000335922 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
FGFR1-202ENST00000335922 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
FGFR1-202ENST00000335922 FAM50AQ14320 339 aaKnown RBP21.22■□□□□ 0.99
FGFR1-202ENST00000335922 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
FGFR1-202ENST00000335922 NEFLP07196 543 aa21.21■□□□□ 0.99
FGFR1-202ENST00000335922 BCANQ96GW7 911 aa21.19■□□□□ 0.98
FGFR1-202ENST00000335922 CNGB1Q14028 1251 aaPredicted RBP21.11■□□□□ 0.97
FGFR1-202ENST00000335922 MIER1Q8N108 512 aa21.08■□□□□ 0.97
FGFR1-202ENST00000335922 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
FGFR1-202ENST00000335922 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
FGFR1-202ENST00000335922 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
FGFR1-202ENST00000335922 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
FGFR1-202ENST00000335922 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
FGFR1-202ENST00000335922 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
FGFR1-202ENST00000335922 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
FGFR1-202ENST00000335922 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
FGFR1-202ENST00000335922 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
FGFR1-202ENST00000335922 HIRIP3Q9BW71 556 aaPredicted RBP20.77■□□□□ 0.91
FGFR1-202ENST00000335922 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
FGFR1-202ENST00000335922 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
FGFR1-202ENST00000335922 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
FGFR1-202ENST00000335922 SOGA1O94964 1423 aa20.73■□□□□ 0.91
FGFR1-202ENST00000335922 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
FGFR1-202ENST00000335922 WIZO95785 1651 aa20.67■□□□□ 0.9
FGFR1-202ENST00000335922 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
FGFR1-202ENST00000335922 FKBP8Q14318 412 aa20.63■□□□□ 0.89
FGFR1-202ENST00000335922 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
FGFR1-202ENST00000335922 CLIP1P30622 1438 aa20.63■□□□□ 0.89
FGFR1-202ENST00000335922 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
FGFR1-202ENST00000335922 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
FGFR1-202ENST00000335922 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
FGFR1-202ENST00000335922 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
FGFR1-202ENST00000335922 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
FGFR1-202ENST00000335922 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
FGFR1-202ENST00000335922 SLC4A1APQ9BWU0 796 aaKnown RBP20.58■□□□□ 0.88
FGFR1-202ENST00000335922 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
FGFR1-202ENST00000335922 ANP32CO43423 234 aa20.54■□□□□ 0.88
FGFR1-202ENST00000335922 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
FGFR1-202ENST00000335922 CUX2O14529 1486 aa20.52■□□□□ 0.88
FGFR1-202ENST00000335922 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
FGFR1-202ENST00000335922 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
FGFR1-202ENST00000335922 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
FGFR1-202ENST00000335922 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
FGFR1-202ENST00000335922 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
FGFR1-202ENST00000335922 IRX6P78412 446 aaPredicted RBP20.46■□□□□ 0.87
FGFR1-202ENST00000335922 EEA1Q15075 1411 aa20.43■□□□□ 0.86
FGFR1-202ENST00000335922 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
FGFR1-202ENST00000335922 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
FGFR1-202ENST00000335922 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
FGFR1-202ENST00000335922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.866e-7■■□□□ 13.1
FGFR1-202ENST00000335922 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
FGFR1-202ENST00000335922 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms