RNA–Protein interactions for RNA: ENST00000638086.1

GRAMD1B-215, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-215ENST00000638086 NISCHQ9Y2I1 1504 aa28■■■□□ 2.07
GRAMD1B-215ENST00000638086 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
GRAMD1B-215ENST00000638086 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
GRAMD1B-215ENST00000638086 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
GRAMD1B-215ENST00000638086 ABCC9O60706 1549 aa22.99■■□□□ 1.27
GRAMD1B-215ENST00000638086 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
GRAMD1B-215ENST00000638086 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
GRAMD1B-215ENST00000638086 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
GRAMD1B-215ENST00000638086 NACADO15069 1562 aa22.72■■□□□ 1.23
GRAMD1B-215ENST00000638086 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
GRAMD1B-215ENST00000638086 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
GRAMD1B-215ENST00000638086 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
GRAMD1B-215ENST00000638086 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
GRAMD1B-215ENST00000638086 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
GRAMD1B-215ENST00000638086 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
GRAMD1B-215ENST00000638086 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
GRAMD1B-215ENST00000638086 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.06
GRAMD1B-215ENST00000638086 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
GRAMD1B-215ENST00000638086 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
GRAMD1B-215ENST00000638086 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
GRAMD1B-215ENST00000638086 WIZO95785 1651 aa21.49■■□□□ 1.03
GRAMD1B-215ENST00000638086 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
GRAMD1B-215ENST00000638086 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
GRAMD1B-215ENST00000638086 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
GRAMD1B-215ENST00000638086 SMARCA2P51531 1590 aa21.14■□□□□ 0.97
GRAMD1B-215ENST00000638086 ATAD2BQ9ULI0 1458 aa21.14■□□□□ 0.97
GRAMD1B-215ENST00000638086 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
GRAMD1B-215ENST00000638086 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
GRAMD1B-215ENST00000638086 HRCP23327 699 aa21.01■□□□□ 0.95
GRAMD1B-215ENST00000638086 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
GRAMD1B-215ENST00000638086 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
GRAMD1B-215ENST00000638086 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
GRAMD1B-215ENST00000638086 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
GRAMD1B-215ENST00000638086 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
GRAMD1B-215ENST00000638086 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
GRAMD1B-215ENST00000638086 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
GRAMD1B-215ENST00000638086 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
GRAMD1B-215ENST00000638086 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
GRAMD1B-215ENST00000638086 CFTRP13569 1480 aa20.5■□□□□ 0.87
GRAMD1B-215ENST00000638086 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
GRAMD1B-215ENST00000638086 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
GRAMD1B-215ENST00000638086 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
GRAMD1B-215ENST00000638086 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
GRAMD1B-215ENST00000638086 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
GRAMD1B-215ENST00000638086 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
GRAMD1B-215ENST00000638086 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
GRAMD1B-215ENST00000638086 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
GRAMD1B-215ENST00000638086 CUX1P39880 1505 aa20.24■□□□□ 0.83
GRAMD1B-215ENST00000638086 NESP48681 1621 aa20.23■□□□□ 0.83
GRAMD1B-215ENST00000638086 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
GRAMD1B-215ENST00000638086 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1B-215ENST00000638086 SOGA1O94964 1423 aa20.18■□□□□ 0.82
GRAMD1B-215ENST00000638086 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
GRAMD1B-215ENST00000638086 EEA1Q15075 1411 aa20.15■□□□□ 0.82
GRAMD1B-215ENST00000638086 RUSC2Q8N2Y8 1516 aa20.13■□□□□ 0.81
GRAMD1B-215ENST00000638086 MYT1Q01538 1121 aa20.06■□□□□ 0.8
GRAMD1B-215ENST00000638086 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
GRAMD1B-215ENST00000638086 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
GRAMD1B-215ENST00000638086 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
GRAMD1B-215ENST00000638086 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
GRAMD1B-215ENST00000638086 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
GRAMD1B-215ENST00000638086 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
GRAMD1B-215ENST00000638086 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
GRAMD1B-215ENST00000638086 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
GRAMD1B-215ENST00000638086 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
GRAMD1B-215ENST00000638086 KIF21BO75037 1637 aa19.95■□□□□ 0.78
GRAMD1B-215ENST00000638086 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
GRAMD1B-215ENST00000638086 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.78
GRAMD1B-215ENST00000638086 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
GRAMD1B-215ENST00000638086 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
GRAMD1B-215ENST00000638086 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
GRAMD1B-215ENST00000638086 CUX2O14529 1486 aa19.84■□□□□ 0.77
GRAMD1B-215ENST00000638086 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.76
GRAMD1B-215ENST00000638086 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
GRAMD1B-215ENST00000638086 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
GRAMD1B-215ENST00000638086 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
GRAMD1B-215ENST00000638086 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
GRAMD1B-215ENST00000638086 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
GRAMD1B-215ENST00000638086 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
GRAMD1B-215ENST00000638086 WDR62O43379 1518 aa19.75■□□□□ 0.75
GRAMD1B-215ENST00000638086 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
GRAMD1B-215ENST00000638086 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
GRAMD1B-215ENST00000638086 THOC2Q8NI27 1593 aaKnown RBP19.71■□□□□ 0.75
GRAMD1B-215ENST00000638086 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
GRAMD1B-215ENST00000638086 IGF1RP08069 1367 aa19.71■□□□□ 0.75
GRAMD1B-215ENST00000638086 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
GRAMD1B-215ENST00000638086 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
GRAMD1B-215ENST00000638086 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
GRAMD1B-215ENST00000638086 ZEB1P37275 1124 aaPredicted RBP19.63■□□□□ 0.73
GRAMD1B-215ENST00000638086 CUL7Q14999 1698 aa19.63■□□□□ 0.73
GRAMD1B-215ENST00000638086 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
GRAMD1B-215ENST00000638086 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
GRAMD1B-215ENST00000638086 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
GRAMD1B-215ENST00000638086 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
GRAMD1B-215ENST00000638086 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
GRAMD1B-215ENST00000638086 CLIP1P30622 1438 aa19.54■□□□□ 0.72
GRAMD1B-215ENST00000638086 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
GRAMD1B-215ENST00000638086 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.71
GRAMD1B-215ENST00000638086 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
GRAMD1B-215ENST00000638086 EIF4G3O43432 1585 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms