RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
XIST-202ENST00000417942 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
XIST-202ENST00000417942 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
XIST-202ENST00000417942 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
XIST-202ENST00000417942 FOXD1Q16676 465 aa20.76■□□□□ 0.91
XIST-202ENST00000417942 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
XIST-202ENST00000417942 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
XIST-202ENST00000417942 ADRA2BP18089 450 aa19.7■□□□□ 0.74
XIST-202ENST00000417942 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
XIST-202ENST00000417942 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
XIST-202ENST00000417942 MSH5O43196 834 aa19.17■□□□□ 0.66
XIST-202ENST00000417942 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
XIST-202ENST00000417942 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
XIST-202ENST00000417942 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
XIST-202ENST00000417942 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
XIST-202ENST00000417942 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
XIST-202ENST00000417942 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
XIST-202ENST00000417942 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
XIST-202ENST00000417942 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
XIST-202ENST00000417942 KCNA4P22459 653 aa17.21■□□□□ 0.35
XIST-202ENST00000417942 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
XIST-202ENST00000417942 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
XIST-202ENST00000417942 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
XIST-202ENST00000417942 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
XIST-202ENST00000417942 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
XIST-202ENST00000417942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
XIST-202ENST00000417942 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
XIST-202ENST00000417942 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
XIST-202ENST00000417942 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
XIST-202ENST00000417942 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
XIST-202ENST00000417942 ZBTB22O15209 634 aa15.88■□□□□ 0.13
XIST-202ENST00000417942 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
XIST-202ENST00000417942 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
XIST-202ENST00000417942 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
XIST-202ENST00000417942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
XIST-202ENST00000417942 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
XIST-202ENST00000417942 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
XIST-202ENST00000417942 CAPN15O75808 1086 aa15.68■□□□□ 0.1
XIST-202ENST00000417942 APLP2Q06481 763 aa15.6■□□□□ 0.09
XIST-202ENST00000417942 DSG3P32926 999 aa15.57■□□□□ 0.08
XIST-202ENST00000417942 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
XIST-202ENST00000417942 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
XIST-202ENST00000417942 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
XIST-202ENST00000417942 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
XIST-202ENST00000417942 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
XIST-202ENST00000417942 ABCB7O75027 752 aa15.4■□□□□ 0.06
XIST-202ENST00000417942 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
XIST-202ENST00000417942 POLA2Q14181 598 aa15.24■□□□□ 0.03
XIST-202ENST00000417942 POTEHQ6S545 545 aa15.08■□□□□ 0
XIST-202ENST00000417942 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
XIST-202ENST00000417942 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
XIST-202ENST00000417942 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
XIST-202ENST00000417942 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
XIST-202ENST00000417942 FBLN2P98095 1184 aa14.71□□□□□ -0.05
XIST-202ENST00000417942 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
XIST-202ENST00000417942 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
XIST-202ENST00000417942 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
XIST-202ENST00000417942 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
XIST-202ENST00000417942 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
XIST-202ENST00000417942 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
XIST-202ENST00000417942 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
XIST-202ENST00000417942 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
XIST-202ENST00000417942 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
XIST-202ENST00000417942 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
XIST-202ENST00000417942 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
XIST-202ENST00000417942 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
XIST-202ENST00000417942 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
XIST-202ENST00000417942 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
XIST-202ENST00000417942 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
XIST-202ENST00000417942 PROM2Q8N271 834 aa14.03□□□□□ -0.16
XIST-202ENST00000417942 FKBP8Q14318 412 aa13.96□□□□□ -0.17
XIST-202ENST00000417942 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
XIST-202ENST00000417942 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
XIST-202ENST00000417942 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
XIST-202ENST00000417942 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
XIST-202ENST00000417942 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
XIST-202ENST00000417942 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
XIST-202ENST00000417942 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
XIST-202ENST00000417942 HAX1O00165 279 aa13.66□□□□□ -0.22
XIST-202ENST00000417942 EVX2Q03828 476 aa13.64□□□□□ -0.23
XIST-202ENST00000417942 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
XIST-202ENST00000417942 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
XIST-202ENST00000417942 MIER1Q8N108 512 aa13.48□□□□□ -0.25
XIST-202ENST00000417942 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
XIST-202ENST00000417942 FBXO3Q9UK99 471 aa13.46□□□□□ -0.25
XIST-202ENST00000417942 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
XIST-202ENST00000417942 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
XIST-202ENST00000417942 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
XIST-202ENST00000417942 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
XIST-202ENST00000417942 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
XIST-202ENST00000417942 GABBR2O75899 941 aa13.3□□□□□ -0.28
XIST-202ENST00000417942 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
XIST-202ENST00000417942 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
XIST-202ENST00000417942 NUBP1P53384 320 aa13.27□□□□□ -0.29
XIST-202ENST00000417942 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
XIST-202ENST00000417942 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
XIST-202ENST00000417942 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
XIST-202ENST00000417942 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
XIST-202ENST00000417942 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
XIST-202ENST00000417942 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms