RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-231ENST00000527203 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
FGFR1-231ENST00000527203 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
FGFR1-231ENST00000527203 ABCC9O60706 1549 aa25.72■■□□□ 1.71
FGFR1-231ENST00000527203 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.5
FGFR1-231ENST00000527203 NACADO15069 1562 aa24.25■■□□□ 1.47
FGFR1-231ENST00000527203 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
FGFR1-231ENST00000527203 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
FGFR1-231ENST00000527203 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
FGFR1-231ENST00000527203 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
FGFR1-231ENST00000527203 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
FGFR1-231ENST00000527203 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
FGFR1-231ENST00000527203 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
FGFR1-231ENST00000527203 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.37
FGFR1-231ENST00000527203 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
FGFR1-231ENST00000527203 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
FGFR1-231ENST00000527203 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
FGFR1-231ENST00000527203 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
FGFR1-231ENST00000527203 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
FGFR1-231ENST00000527203 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
FGFR1-231ENST00000527203 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
FGFR1-231ENST00000527203 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
FGFR1-231ENST00000527203 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
FGFR1-231ENST00000527203 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
FGFR1-231ENST00000527203 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
FGFR1-231ENST00000527203 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
FGFR1-231ENST00000527203 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
FGFR1-231ENST00000527203 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
FGFR1-231ENST00000527203 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
FGFR1-231ENST00000527203 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
FGFR1-231ENST00000527203 NESP48681 1621 aa22.13■■□□□ 1.13
FGFR1-231ENST00000527203 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
FGFR1-231ENST00000527203 CUX2O14529 1486 aa22.03■■□□□ 1.12
FGFR1-231ENST00000527203 WIZO95785 1651 aa21.97■■□□□ 1.11
FGFR1-231ENST00000527203 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
FGFR1-231ENST00000527203 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
FGFR1-231ENST00000527203 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
FGFR1-231ENST00000527203 DNAJC5Q9H3Z4 198 aa21.86■■□□□ 1.09
FGFR1-231ENST00000527203 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
FGFR1-231ENST00000527203 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
FGFR1-231ENST00000527203 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
FGFR1-231ENST00000527203 TOP2AP11388 1531 aaKnown RBP21.62■■□□□ 1.05
FGFR1-231ENST00000527203 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
FGFR1-231ENST00000527203 WDR62O43379 1518 aa21.55■■□□□ 1.04
FGFR1-231ENST00000527203 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
FGFR1-231ENST00000527203 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.03
FGFR1-231ENST00000527203 CFTRP13569 1480 aa21.49■■□□□ 1.03
FGFR1-231ENST00000527203 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
FGFR1-231ENST00000527203 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
FGFR1-231ENST00000527203 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
FGFR1-231ENST00000527203 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
FGFR1-231ENST00000527203 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
FGFR1-231ENST00000527203 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
FGFR1-231ENST00000527203 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
FGFR1-231ENST00000527203 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
FGFR1-231ENST00000527203 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
FGFR1-231ENST00000527203 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
FGFR1-231ENST00000527203 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
FGFR1-231ENST00000527203 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
FGFR1-231ENST00000527203 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
FGFR1-231ENST00000527203 CHD1O14646 1710 aa20.9■□□□□ 0.94
FGFR1-231ENST00000527203 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
FGFR1-231ENST00000527203 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
FGFR1-231ENST00000527203 RIMBP3CA6NJZ7 1639 aa20.87■□□□□ 0.93
FGFR1-231ENST00000527203 RIMBP3BA6NNM3 1639 aa20.87■□□□□ 0.93
FGFR1-231ENST00000527203 RIMBP3Q9UFD9 1639 aa20.87■□□□□ 0.93
FGFR1-231ENST00000527203 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
FGFR1-231ENST00000527203 CUX1P39880 1505 aa20.83■□□□□ 0.92
FGFR1-231ENST00000527203 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
FGFR1-231ENST00000527203 SOGA1O94964 1423 aa20.78■□□□□ 0.92
FGFR1-231ENST00000527203 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
FGFR1-231ENST00000527203 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
FGFR1-231ENST00000527203 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
FGFR1-231ENST00000527203 FBLN2P98095 1184 aa20.73■□□□□ 0.91
FGFR1-231ENST00000527203 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
FGFR1-231ENST00000527203 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
FGFR1-231ENST00000527203 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
FGFR1-231ENST00000527203 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
FGFR1-231ENST00000527203 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
FGFR1-231ENST00000527203 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
FGFR1-231ENST00000527203 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
FGFR1-231ENST00000527203 CYB5RLQ6IPT4 315 aa20.55■□□□□ 0.88
FGFR1-231ENST00000527203 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
FGFR1-231ENST00000527203 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
FGFR1-231ENST00000527203 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
FGFR1-231ENST00000527203 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
FGFR1-231ENST00000527203 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
FGFR1-231ENST00000527203 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
FGFR1-231ENST00000527203 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
FGFR1-231ENST00000527203 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
FGFR1-231ENST00000527203 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
FGFR1-231ENST00000527203 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
FGFR1-231ENST00000527203 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
FGFR1-231ENST00000527203 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
FGFR1-231ENST00000527203 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
FGFR1-231ENST00000527203 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.84
FGFR1-231ENST00000527203 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
FGFR1-231ENST00000527203 NUP160Q12769 1436 aa20.26■□□□□ 0.83
FGFR1-231ENST00000527203 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
FGFR1-231ENST00000527203 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
FGFR1-231ENST00000527203 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms