RNA–Protein interactions for RNA: ENST00000398474.7

MEG3-203, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-203ENST00000398474 NISCHQ9Y2I1 1504 aa33.45■■■□□ 2.95
MEG3-203ENST00000398474 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
MEG3-203ENST00000398474 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
MEG3-203ENST00000398474 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
MEG3-203ENST00000398474 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.03
MEG3-203ENST00000398474 ABCC9O60706 1549 aa27.48■■□□□ 1.99
MEG3-203ENST00000398474 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
MEG3-203ENST00000398474 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
MEG3-203ENST00000398474 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
MEG3-203ENST00000398474 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
MEG3-203ENST00000398474 NACADO15069 1562 aa26.58■■□□□ 1.85
MEG3-203ENST00000398474 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
MEG3-203ENST00000398474 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
MEG3-203ENST00000398474 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
MEG3-203ENST00000398474 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
MEG3-203ENST00000398474 CECR2Q9BXF3 1484 aa25.88■■□□□ 1.73
MEG3-203ENST00000398474 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
MEG3-203ENST00000398474 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
MEG3-203ENST00000398474 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
MEG3-203ENST00000398474 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
MEG3-203ENST00000398474 WIZO95785 1651 aa25.72■■□□□ 1.71
MEG3-203ENST00000398474 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
MEG3-203ENST00000398474 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
MEG3-203ENST00000398474 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
MEG3-203ENST00000398474 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
MEG3-203ENST00000398474 HRCP23327 699 aa25.51■■□□□ 1.67
MEG3-203ENST00000398474 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
MEG3-203ENST00000398474 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
MEG3-203ENST00000398474 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
MEG3-203ENST00000398474 TRIM26Q12899 539 aaPredicted RBP25.26■■□□□ 1.63
MEG3-203ENST00000398474 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
MEG3-203ENST00000398474 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.63
MEG3-203ENST00000398474 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.61
MEG3-203ENST00000398474 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
MEG3-203ENST00000398474 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
MEG3-203ENST00000398474 EEA1Q15075 1411 aa24.93■■□□□ 1.58
MEG3-203ENST00000398474 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.58
MEG3-203ENST00000398474 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
MEG3-203ENST00000398474 ZEB1P37275 1124 aaPredicted RBP24.81■■□□□ 1.56
MEG3-203ENST00000398474 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
MEG3-203ENST00000398474 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
MEG3-203ENST00000398474 EHMT2Q96KQ7 1210 aa24.72■■□□□ 1.55
MEG3-203ENST00000398474 SOGA1O94964 1423 aa24.69■■□□□ 1.54
MEG3-203ENST00000398474 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
MEG3-203ENST00000398474 PPARGC1BQ86YN6 1023 aaKnown RBP24.67■■□□□ 1.54
MEG3-203ENST00000398474 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
MEG3-203ENST00000398474 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
MEG3-203ENST00000398474 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
MEG3-203ENST00000398474 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
MEG3-203ENST00000398474 HMGXB3Q12766 1538 aa24.59■■□□□ 1.53
MEG3-203ENST00000398474 KIF21BO75037 1637 aa24.55■■□□□ 1.52
MEG3-203ENST00000398474 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
MEG3-203ENST00000398474 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
MEG3-203ENST00000398474 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.51
MEG3-203ENST00000398474 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
MEG3-203ENST00000398474 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
MEG3-203ENST00000398474 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.5
MEG3-203ENST00000398474 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
MEG3-203ENST00000398474 CLIP1P30622 1438 aa24.22■■□□□ 1.47
MEG3-203ENST00000398474 ERICH3Q5RHP9 1530 aa24.22■■□□□ 1.47
MEG3-203ENST00000398474 CFTRP13569 1480 aa24.21■■□□□ 1.47
MEG3-203ENST00000398474 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
MEG3-203ENST00000398474 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
MEG3-203ENST00000398474 CUX1P39880 1505 aa24.13■■□□□ 1.45
MEG3-203ENST00000398474 CCER1Q8TC90 406 aaPredicted RBP24.1■■□□□ 1.45
MEG3-203ENST00000398474 PRXQ9BXM0 1461 aa24.1■■□□□ 1.45
MEG3-203ENST00000398474 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
MEG3-203ENST00000398474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
MEG3-203ENST00000398474 APLP2Q06481 763 aa23.95■■□□□ 1.42
MEG3-203ENST00000398474 TTBK1Q5TCY1 1321 aaPredicted RBP23.95■■□□□ 1.42
MEG3-203ENST00000398474 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
MEG3-203ENST00000398474 NESP48681 1621 aa23.89■■□□□ 1.42
MEG3-203ENST00000398474 ARAP1Q96P48 1450 aa23.86■■□□□ 1.41
MEG3-203ENST00000398474 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
MEG3-203ENST00000398474 CUX2O14529 1486 aa23.76■■□□□ 1.39
MEG3-203ENST00000398474 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
MEG3-203ENST00000398474 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
MEG3-203ENST00000398474 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
MEG3-203ENST00000398474 IGF1RP08069 1367 aa23.68■■□□□ 1.38
MEG3-203ENST00000398474 ARHGAP35Q9NRY4 1499 aa23.67■■□□□ 1.38
MEG3-203ENST00000398474 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
MEG3-203ENST00000398474 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.38
MEG3-203ENST00000398474 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
MEG3-203ENST00000398474 HNRNPUL2Q1KMD3 747 aaKnown RBP23.63■■□□□ 1.37
MEG3-203ENST00000398474 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
MEG3-203ENST00000398474 MAP3K1Q13233 1512 aa23.61■■□□□ 1.37
MEG3-203ENST00000398474 CARMIL1Q5VZK9 1371 aa23.6■■□□□ 1.37
MEG3-203ENST00000398474 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.37
MEG3-203ENST00000398474 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
MEG3-203ENST00000398474 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
MEG3-203ENST00000398474 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
MEG3-203ENST00000398474 CUL7Q14999 1698 aa23.53■■□□□ 1.36
MEG3-203ENST00000398474 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
MEG3-203ENST00000398474 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
MEG3-203ENST00000398474 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
MEG3-203ENST00000398474 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
MEG3-203ENST00000398474 KANK4Q5T7N3 995 aaPredicted RBP23.47■■□□□ 1.35
MEG3-203ENST00000398474 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
MEG3-203ENST00000398474 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
MEG3-203ENST00000398474 EFCAB5A4FU69 1503 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms