RNA–Protein interactions for RNA: ENST00000429829.5

XIST-204, X inactive specific transcript, humanhuman

TSL 1 (best) BASIC

Gene XIST, Length 19,275 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-204ENST00000429829 MYT1Q01538 1121 aa8.76□□□□□ -1.01
XIST-204ENST00000429829 PELP1Q8IZL8 1130 aaKnown RBP8.72□□□□□ -1.01
XIST-204ENST00000429829 TTBK1Q5TCY1 1321 aaPredicted RBP8.24□□□□□ -1.09
XIST-204ENST00000429829 ERICH6Q7L0X2 663 aa7.97□□□□□ -1.13
XIST-204ENST00000429829 CENPBP07199 599 aaPredicted RBP7.69□□□□□ -1.18
XIST-204ENST00000429829 HRCP23327 699 aa7.6□□□□□ -1.19
XIST-204ENST00000429829 SLC24A1O60721 1099 aa7.56□□□□□ -1.2
XIST-204ENST00000429829 ZEB1P37275 1124 aaPredicted RBP7.55□□□□□ -1.2
XIST-204ENST00000429829 CCER1Q8TC90 406 aaPredicted RBP7.46□□□□□ -1.21
XIST-204ENST00000429829 PCGF6Q9BYE7 350 aa7.45□□□□□ -1.22
XIST-204ENST00000429829 BCL11AQ9H165 835 aa7.4□□□□□ -1.22
XIST-204ENST00000429829 YTHDC1Q96MU7 727 aaKnown RBP7.35□□□□□ -1.23
XIST-204ENST00000429829 RANGAP1P46060 587 aaPredicted RBP7.32□□□□□ -1.24
XIST-204ENST00000429829 PRKCSHP14314 528 aaPredicted RBP7.29□□□□□ -1.24
XIST-204ENST00000429829 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
XIST-204ENST00000429829 MYT1LQ9UL68 1186 aa7.28□□□□□ -1.24
XIST-204ENST00000429829 GLIPR1L2Q4G1C9 344 aa7.27□□□□□ -1.25
XIST-204ENST00000429829 ACIN1Q9UKV3 1341 aaKnown RBP7.26□□□□□ -1.25
XIST-204ENST00000429829 SCAF1Q9H7N4 1312 aaKnown RBP7.26□□□□□ -1.25
XIST-204ENST00000429829 GTF3C3Q9Y5Q9 886 aa7.26□□□□□ -1.25
XIST-204ENST00000429829 PPARGC1BQ86YN6 1023 aaKnown RBP7.21□□□□□ -1.26
XIST-204ENST00000429829 APLP2Q06481 763 aa7.2□□□□□ -1.26
XIST-204ENST00000429829 ANP32EQ9BTT0 268 aa7.2□□□□□ -1.26
XIST-204ENST00000429829 DAXXQ9UER7 740 aaPredicted RBP7.19□□□□□ -1.26
XIST-204ENST00000429829 NEFLP07196 543 aa7.14□□□□□ -1.27
XIST-204ENST00000429829 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
XIST-204ENST00000429829 CLSPNQ9HAW4 1339 aa7.09□□□□□ -1.27
XIST-204ENST00000429829 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.28
XIST-204ENST00000429829 TRIM26Q12899 539 aaPredicted RBP7.09□□□□□ -1.28
XIST-204ENST00000429829 FAM9AQ8IZU1 332 aaPredicted RBP7.06□□□□□ -1.28
XIST-204ENST00000429829 DIEXFQ68CQ4 756 aaKnown RBP7.05□□□□□ -1.28
XIST-204ENST00000429829 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
XIST-204ENST00000429829 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
XIST-204ENST00000429829 SUPT5HO00267 1087 aaKnown RBP6.95□□□□□ -1.3
XIST-204ENST00000429829 PODXL2Q9NZ53 605 aa6.93□□□□□ -1.3
XIST-204ENST00000429829 CSRNP3Q8WYN3 585 aa6.92□□□□□ -1.3
XIST-204ENST00000429829 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
XIST-204ENST00000429829 ZNF316A6NFI3 1004 aaPredicted RBP6.88□□□□□ -1.31
XIST-204ENST00000429829 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
XIST-204ENST00000429829 UBE2Q2Q8WVN8 375 aa6.85□□□□□ -1.31
XIST-204ENST00000429829 NCLP19338 710 aaKnown RBP6.84□□□□□ -1.31
XIST-204ENST00000429829 ZNF326Q5BKZ1 582 aaKnown RBP6.84□□□□□ -1.32
XIST-204ENST00000429829 DEKP35659 375 aaKnown RBP6.8□□□□□ -1.32
XIST-204ENST00000429829 TNNT2P45379 298 aaPredicted RBP6.79□□□□□ -1.32
XIST-204ENST00000429829 ANO8Q9HCE9 1232 aaPredicted RBP6.79□□□□□ -1.32
XIST-204ENST00000429829 ANP32AP39687 249 aaKnown RBP6.76□□□□□ -1.33
XIST-204ENST00000429829 RSPH6AQ9H0K4 717 aa6.76□□□□□ -1.33
XIST-204ENST00000429829 CCDC136Q96JN2 1154 aa6.73□□□□□ -1.33
XIST-204ENST00000429829 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.72□□□□□ -1.33
XIST-204ENST00000429829 VSIG10Q8N0Z9 540 aa6.72□□□□□ -1.33
XIST-204ENST00000429829 BCANQ96GW7 911 aa6.72□□□□□ -1.33
XIST-204ENST00000429829 NBR1Q14596 966 aa6.72□□□□□ -1.33
XIST-204ENST00000429829 PDE4CQ08493 712 aa6.71□□□□□ -1.34
XIST-204ENST00000429829 TSHZ2Q9NRE2 1034 aa6.7□□□□□ -1.34
XIST-204ENST00000429829 ZBTB47Q9UFB7 747 aaPredicted RBP6.7□□□□□ -1.34
XIST-204ENST00000429829 EHMT2Q96KQ7 1210 aa6.68□□□□□ -1.34
XIST-204ENST00000429829 RBM19Q9Y4C8 960 aaKnown RBP6.68□□□□□ -1.34
XIST-204ENST00000429829 RTN4Q9NQC3 1192 aaKnown RBP6.68□□□□□ -1.34
XIST-204ENST00000429829 FKBP8Q14318 412 aa6.66□□□□□ -1.34
XIST-204ENST00000429829 HSP90AA1P07900 732 aaKnown RBP6.66□□□□□ -1.34
XIST-204ENST00000429829 A0A0U1RQG5 324 aaPredicted RBP6.66□□□□□ -1.34
XIST-204ENST00000429829 PTMSP20962 102 aa6.65□□□□□ -1.34
XIST-204ENST00000429829 SUPT16HQ9Y5B9 1047 aaKnown RBP6.65□□□□□ -1.35
XIST-204ENST00000429829 NEFMP07197 916 aa6.64□□□□□ -1.35
XIST-204ENST00000429829 PLEKHG5O94827 1062 aa6.64□□□□□ -1.35
XIST-204ENST00000429829 HSP90AA2PQ14568 343 aaPredicted RBP6.63□□□□□ -1.35
XIST-204ENST00000429829 SALL2Q9Y467 1007 aaPredicted RBP6.63□□□□□ -1.35
XIST-204ENST00000429829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.63□□□□□ -1.35
XIST-204ENST00000429829 TRIM44Q96DX7 344 aaPredicted RBP6.63□□□□□ -1.35
XIST-204ENST00000429829 CNGB1Q14028 1251 aaPredicted RBP6.63□□□□□ -1.35
XIST-204ENST00000429829 ARXQ96QS3 562 aa6.63□□□□□ -1.35
XIST-204ENST00000429829 POLR3GLQ9BT43 218 aa6.63□□□□□ -1.35
XIST-204ENST00000429829 CHIC1Q5VXU3 224 aa6.61□□□□□ -1.35
XIST-204ENST00000429829 NOP58Q9Y2X3 529 aaKnown RBP6.61□□□□□ -1.35
XIST-204ENST00000429829 PDIA4P13667 645 aaKnown RBP6.61□□□□□ -1.35
XIST-204ENST00000429829 CDK11BP21127 795 aaKnown RBP6.61□□□□□ -1.35
XIST-204ENST00000429829 PPM1GO15355 546 aaPredicted RBP6.6□□□□□ -1.35
XIST-204ENST00000429829 NCBP3Q53F19 620 aaKnown RBP6.6□□□□□ -1.35
XIST-204ENST00000429829 LOC105371045A0A1W2PR82 267 aa6.59□□□□□ -1.35
XIST-204ENST00000429829 NAP1L5Q96NT1 182 aaPredicted RBP6.59□□□□□ -1.36
XIST-204ENST00000429829 TAF7LQ5H9L4 462 aa6.58□□□□□ -1.36
XIST-204ENST00000429829 MIER1Q8N108 512 aa6.58□□□□□ -1.36
XIST-204ENST00000429829 ANP32BQ92688 251 aaKnown RBP6.57□□□□□ -1.36
XIST-204ENST00000429829 ZMYND15Q9H091 742 aa6.57□□□□□ -1.36
XIST-204ENST00000429829 HOMEZQ8IX15 550 aa6.56□□□□□ -1.36
XIST-204ENST00000429829 USP35Q9P2H5 1018 aa6.55□□□□□ -1.36
XIST-204ENST00000429829 FANCIQ9NVI1 1328 aa6.55□□□□□ -1.36
XIST-204ENST00000429829 PNNQ9H307 717 aaKnown RBP6.55□□□□□ -1.36
XIST-204ENST00000429829 ITGAEP38570 1179 aa6.51□□□□□ -1.37
XIST-204ENST00000429829 RRP9O43818 475 aaKnown RBP6.51□□□□□ -1.37
XIST-204ENST00000429829 CANXP27824 592 aaKnown RBP6.51□□□□□ -1.37
XIST-204ENST00000429829 DCAF1Q9Y4B6 1507 aa6.51□□□□□ -1.37
XIST-204ENST00000429829 DDRGK1Q96HY6 314 aa6.49□□□□□ -1.37
XIST-204ENST00000429829 TIMELESSQ9UNS1 1208 aa6.49□□□□□ -1.37
XIST-204ENST00000429829 APPP05067 770 aa6.48□□□□□ -1.37
XIST-204ENST00000429829 TRIM41Q8WV44 630 aa6.48□□□□□ -1.37
XIST-204ENST00000429829 L1TD1Q5T7N2 865 aaKnown RBP6.47□□□□□ -1.37
XIST-204ENST00000429829 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
XIST-204ENST00000429829 DNTTIP2Q5QJE6 756 aaKnown RBP6.47□□□□□ -1.37
XIST-204ENST00000429829 ANP32CO43423 234 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms