RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
FGFR1-241ENST00000619564 SUPT5HO00267 1087 aaKnown RBP33.25■■■□□ 2.91
FGFR1-241ENST00000619564 NISCHQ9Y2I1 1504 aa33.09■■■□□ 2.89
FGFR1-241ENST00000619564 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
FGFR1-241ENST00000619564 EHMT2Q96KQ7 1210 aa32.29■■■□□ 2.76
FGFR1-241ENST00000619564 APLP2Q06481 763 aa31.99■■■□□ 2.71
FGFR1-241ENST00000619564 FAM9AQ8IZU1 332 aaPredicted RBP31.77■■■□□ 2.68
FGFR1-241ENST00000619564 PELP1Q8IZL8 1130 aaKnown RBP31.7■■■□□ 2.66
FGFR1-241ENST00000619564 TTBK1Q5TCY1 1321 aaPredicted RBP31.19■■■□□ 2.58
FGFR1-241ENST00000619564 RANGAP1P46060 587 aaPredicted RBP31.02■■■□□ 2.56
FGFR1-241ENST00000619564 ATP1B4Q9UN42 357 aaPredicted RBP30.9■■■□□ 2.54
FGFR1-241ENST00000619564 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
FGFR1-241ENST00000619564 PCGF6Q9BYE7 350 aa30.83■■■□□ 2.53
FGFR1-241ENST00000619564 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
FGFR1-241ENST00000619564 CCER1Q8TC90 406 aaPredicted RBP30.53■■■□□ 2.48
FGFR1-241ENST00000619564 ZEB1P37275 1124 aaPredicted RBP30.48■■■□□ 2.47
FGFR1-241ENST00000619564 CENPBP07199 599 aaPredicted RBP30.41■■■□□ 2.46
FGFR1-241ENST00000619564 ERICH6Q7L0X2 663 aa30.33■■■□□ 2.45
FGFR1-241ENST00000619564 NEFLP07196 543 aa30■■■□□ 2.39
FGFR1-241ENST00000619564 MYT1LQ9UL68 1186 aa29.94■■■□□ 2.38
FGFR1-241ENST00000619564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.89■■■□□ 2.37
FGFR1-241ENST00000619564 HNRNPUL2Q1KMD3 747 aaKnown RBP29.89■■■□□ 2.37
FGFR1-241ENST00000619564 PPARGC1BQ86YN6 1023 aaKnown RBP29.81■■■□□ 2.36
FGFR1-241ENST00000619564 YTHDC1Q96MU7 727 aaKnown RBP29.75■■■□□ 2.35
FGFR1-241ENST00000619564 ITGAEP38570 1179 aa29.65■■■□□ 2.34
FGFR1-241ENST00000619564 TRIM26Q12899 539 aaPredicted RBP29.53■■■□□ 2.32
FGFR1-241ENST00000619564 POLR3GLQ9BT43 218 aa29.53■■■□□ 2.32
FGFR1-241ENST00000619564 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
FGFR1-241ENST00000619564 DAXXQ9UER7 740 aaPredicted RBP29.23■■■□□ 2.27
FGFR1-241ENST00000619564 LOC105371045A0A1W2PR82 267 aa29.16■■■□□ 2.26
FGFR1-241ENST00000619564 SLC4A1APQ9BWU0 796 aaKnown RBP29.14■■■□□ 2.26
FGFR1-241ENST00000619564 CNGB1Q14028 1251 aaPredicted RBP29.13■■■□□ 2.25
FGFR1-241ENST00000619564 HRCP23327 699 aa29.02■■■□□ 2.24
FGFR1-241ENST00000619564 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.234e-6■□□□□ 9.3
FGFR1-241ENST00000619564 ABCC9O60706 1549 aa28.97■■■□□ 2.23
FGFR1-241ENST00000619564 FAM50AQ14320 339 aaKnown RBP28.92■■■□□ 2.22
FGFR1-241ENST00000619564 TRIM52Q96A61 297 aa28.84■■■□□ 2.21
FGFR1-241ENST00000619564 MYT1Q01538 1121 aa28.79■■■□□ 2.2
FGFR1-241ENST00000619564 FBLN2P98095 1184 aa28.68■■■□□ 2.18
FGFR1-241ENST00000619564 CLSPNQ9HAW4 1339 aa28.66■■■□□ 2.18
FGFR1-241ENST00000619564 NEUROD1Q13562 356 aa28.56■■■□□ 2.16
FGFR1-241ENST00000619564 ZNF316A6NFI3 1004 aaPredicted RBP28.5■■■□□ 2.15
FGFR1-241ENST00000619564 DIEXFQ68CQ4 756 aaKnown RBP28.48■■■□□ 2.15
FGFR1-241ENST00000619564 ZNF326Q5BKZ1 582 aaKnown RBP28.48■■■□□ 2.15
FGFR1-241ENST00000619564 RTL5Q5HYW3 569 aaPredicted RBP28.31■■■□□ 2.12
FGFR1-241ENST00000619564 BCANQ96GW7 911 aa28.29■■■□□ 2.12
FGFR1-241ENST00000619564 ZBTB47Q9UFB7 747 aaPredicted RBP28.29■■■□□ 2.12
FGFR1-241ENST00000619564 ANP32CO43423 234 aa28.26■■■□□ 2.12
FGFR1-241ENST00000619564 P3H3Q8IVL6 736 aa28.2■■■□□ 2.11
FGFR1-241ENST00000619564 ARID3CA6NKF2 412 aa28.2■■■□□ 2.1
FGFR1-241ENST00000619564 SLC24A1O60721 1099 aa28.18■■■□□ 2.1
FGFR1-241ENST00000619564 NEFMP07197 916 aa28.16■■■□□ 2.1
FGFR1-241ENST00000619564 ZNF777Q9ULD5 760 aaPredicted RBP28.1■■■□□ 2.09
FGFR1-241ENST00000619564 CDK11AQ9UQ88 783 aaPredicted RBP28.1■■■□□ 2.09
FGFR1-241ENST00000619564 CANXP27824 592 aaKnown RBP28.06■■■□□ 2.08
FGFR1-241ENST00000619564 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
FGFR1-241ENST00000619564 ESF1Q9H501 851 aaKnown RBP28.04■■■□□ 2.08
FGFR1-241ENST00000619564 BCL11AQ9H165 835 aa27.9■■■□□ 2.06
FGFR1-241ENST00000619564 NPM1P06748 294 aaKnown RBP eCLIP27.86■■■□□ 2.05
FGFR1-241ENST00000619564 STAG3Q9UJ98 1225 aa27.84■■■□□ 2.05
FGFR1-241ENST00000619564 CHGAP10645 457 aaKnown RBP27.78■■■□□ 2.04
FGFR1-241ENST00000619564 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
FGFR1-241ENST00000619564 PLPPR3Q6T4P5 718 aa27.68■■■□□ 2.02
FGFR1-241ENST00000619564 GTF3C3Q9Y5Q9 886 aa27.68■■■□□ 2.02
FGFR1-241ENST00000619564 TONSLQ96HA7 1378 aa27.62■■■□□ 2.01
FGFR1-241ENST00000619564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.47■■□□□ 1.996e-7■■□□□ 13.1
FGFR1-241ENST00000619564 ANP32AP39687 249 aaKnown RBP27.46■■□□□ 1.99
FGFR1-241ENST00000619564 CHIC2Q9UKJ5 165 aa27.41■■□□□ 1.98
FGFR1-241ENST00000619564 TSPY4P0CV99 314 aa27.41■■□□□ 1.98
FGFR1-241ENST00000619564 TSPY10P0CW01 314 aa27.41■■□□□ 1.98
FGFR1-241ENST00000619564 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
FGFR1-241ENST00000619564 NPM2Q86SE8 214 aaKnown RBP27.32■■□□□ 1.96
FGFR1-241ENST00000619564 MTUS2Q5JR59 1369 aa27.28■■□□□ 1.96
FGFR1-241ENST00000619564 FAM9BQ8IZU0 186 aa27.28■■□□□ 1.96
FGFR1-241ENST00000619564 HSP90AA1P07900 732 aaKnown RBP27.27■■□□□ 1.96
FGFR1-241ENST00000619564 HNRNPUQ00839 825 aaKnown RBP eCLIP27.27■■□□□ 1.964e-7■■□□□ 13.9
FGFR1-241ENST00000619564 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
FGFR1-241ENST00000619564 UPF2Q9HAU5 1272 aaKnown RBP27.25■■□□□ 1.95
FGFR1-241ENST00000619564 DDX10Q13206 875 aaKnown RBP27.23■■□□□ 1.95
FGFR1-241ENST00000619564 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
FGFR1-241ENST00000619564 TMC1Q8TDI8 760 aa27.22■■□□□ 1.95
FGFR1-241ENST00000619564 KDM2AQ9Y2K7 1162 aa27.21■■□□□ 1.95
FGFR1-241ENST00000619564 SALL2Q9Y467 1007 aaPredicted RBP27.2■■□□□ 1.94
FGFR1-241ENST00000619564 WDR43Q15061 677 aaKnown RBP eCLIP27.2■■□□□ 1.94
FGFR1-241ENST00000619564 SCAF1Q9H7N4 1312 aaKnown RBP27.2■■□□□ 1.94
FGFR1-241ENST00000619564 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.16■■□□□ 1.94
FGFR1-241ENST00000619564 FKBP8Q14318 412 aa27.15■■□□□ 1.94
FGFR1-241ENST00000619564 ANP32BQ92688 251 aaKnown RBP27.15■■□□□ 1.94
FGFR1-241ENST00000619564 PPP1R15AO75807 674 aaPredicted RBP27.07■■□□□ 1.92
FGFR1-241ENST00000619564 KCNH8Q96L42 1107 aa27.06■■□□□ 1.92
FGFR1-241ENST00000619564 A0A0G2JS52 829 aa27.03■■□□□ 1.92
FGFR1-241ENST00000619564 PLEKHD1A6NEE1 506 aa27.03■■□□□ 1.92
FGFR1-241ENST00000619564 MRS2Q9HD23 443 aa27.01■■□□□ 1.91
FGFR1-241ENST00000619564 CLIP1P30622 1438 aa27.01■■□□□ 1.91
FGFR1-241ENST00000619564 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
FGFR1-241ENST00000619564 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
FGFR1-241ENST00000619564 CCDC136Q96JN2 1154 aa26.97■■□□□ 1.91
FGFR1-241ENST00000619564 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
FGFR1-241ENST00000619564 C14orf37Q86TY3 774 aa26.97■■□□□ 1.91
FGFR1-241ENST00000619564 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms