RNA–Protein interactions for RNA: ENST00000341462.8

FGFR1-203, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 6,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-203ENST00000341462 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
FGFR1-203ENST00000341462 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
FGFR1-203ENST00000341462 EHMT2Q96KQ7 1210 aa30.5■■■□□ 2.47
FGFR1-203ENST00000341462 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
FGFR1-203ENST00000341462 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
FGFR1-203ENST00000341462 APLP2Q06481 763 aa29.59■■■□□ 2.33
FGFR1-203ENST00000341462 FAM9AQ8IZU1 332 aaPredicted RBP29.42■■■□□ 2.3
FGFR1-203ENST00000341462 TTBK1Q5TCY1 1321 aaPredicted RBP29.42■■■□□ 2.3
FGFR1-203ENST00000341462 RANGAP1P46060 587 aaPredicted RBP29.11■■■□□ 2.25
FGFR1-203ENST00000341462 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
FGFR1-203ENST00000341462 ATP1B4Q9UN42 357 aaPredicted RBP28.91■■■□□ 2.22
FGFR1-203ENST00000341462 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
FGFR1-203ENST00000341462 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
FGFR1-203ENST00000341462 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
FGFR1-203ENST00000341462 CCER1Q8TC90 406 aaPredicted RBP28.3■■■□□ 2.12
FGFR1-203ENST00000341462 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
FGFR1-203ENST00000341462 ERICH6Q7L0X2 663 aa28.12■■■□□ 2.09
FGFR1-203ENST00000341462 MYT1LQ9UL68 1186 aa28.08■■■□□ 2.09
FGFR1-203ENST00000341462 YTHDC1Q96MU7 727 aaKnown RBP28.05■■■□□ 2.08
FGFR1-203ENST00000341462 CENPBP07199 599 aaPredicted RBP28■■■□□ 2.07
FGFR1-203ENST00000341462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
FGFR1-203ENST00000341462 HNRNPUL2Q1KMD3 747 aaKnown RBP27.93■■■□□ 2.06
FGFR1-203ENST00000341462 ZEB1P37275 1124 aaPredicted RBP27.84■■■□□ 2.05
FGFR1-203ENST00000341462 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
FGFR1-203ENST00000341462 ITGAEP38570 1179 aa27.64■■■□□ 2.02
FGFR1-203ENST00000341462 POLR3GLQ9BT43 218 aa27.59■■■□□ 2.01
FGFR1-203ENST00000341462 NEFLP07196 543 aa27.59■■■□□ 2.01
FGFR1-203ENST00000341462 CNGB1Q14028 1251 aaPredicted RBP27.42■■□□□ 1.98
FGFR1-203ENST00000341462 LOC105371045A0A1W2PR82 267 aa27.31■■□□□ 1.96
FGFR1-203ENST00000341462 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
FGFR1-203ENST00000341462 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
FGFR1-203ENST00000341462 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.934e-6■□□□□ 9.3
FGFR1-203ENST00000341462 HRCP23327 699 aa27.02■■□□□ 1.92
FGFR1-203ENST00000341462 DAXXQ9UER7 740 aaPredicted RBP26.97■■□□□ 1.91
FGFR1-203ENST00000341462 MYT1Q01538 1121 aa26.97■■□□□ 1.91
FGFR1-203ENST00000341462 ABCC9O60706 1549 aa26.89■■□□□ 1.9
FGFR1-203ENST00000341462 FBLN2P98095 1184 aa26.88■■□□□ 1.89
FGFR1-203ENST00000341462 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
FGFR1-203ENST00000341462 TRIM52Q96A61 297 aa26.78■■□□□ 1.88
FGFR1-203ENST00000341462 CLSPNQ9HAW4 1339 aa26.57■■□□□ 1.84
FGFR1-203ENST00000341462 NEUROD1Q13562 356 aa26.57■■□□□ 1.84
FGFR1-203ENST00000341462 ZNF326Q5BKZ1 582 aaKnown RBP26.55■■□□□ 1.84
FGFR1-203ENST00000341462 BCANQ96GW7 911 aa26.53■■□□□ 1.84
FGFR1-203ENST00000341462 DIEXFQ68CQ4 756 aaKnown RBP26.48■■□□□ 1.83
FGFR1-203ENST00000341462 ARID3CA6NKF2 412 aa26.46■■□□□ 1.83
FGFR1-203ENST00000341462 SLC24A1O60721 1099 aa26.44■■□□□ 1.82
FGFR1-203ENST00000341462 ZNF316A6NFI3 1004 aaPredicted RBP26.34■■□□□ 1.81
FGFR1-203ENST00000341462 P3H3Q8IVL6 736 aa26.31■■□□□ 1.8
FGFR1-203ENST00000341462 PLPPR3Q6T4P5 718 aa26.25■■□□□ 1.79
FGFR1-203ENST00000341462 BCL11AQ9H165 835 aa26.24■■□□□ 1.79
FGFR1-203ENST00000341462 ZNF777Q9ULD5 760 aaPredicted RBP26.2■■□□□ 1.79
FGFR1-203ENST00000341462 ZBTB47Q9UFB7 747 aaPredicted RBP26.18■■□□□ 1.78
FGFR1-203ENST00000341462 ESF1Q9H501 851 aaKnown RBP26.16■■□□□ 1.78
FGFR1-203ENST00000341462 RTL5Q5HYW3 569 aaPredicted RBP26.15■■□□□ 1.78
FGFR1-203ENST00000341462 NEFMP07197 916 aa26.05■■□□□ 1.76
FGFR1-203ENST00000341462 ANP32CO43423 234 aa26■■□□□ 1.75
FGFR1-203ENST00000341462 CANXP27824 592 aaKnown RBP26■■□□□ 1.75
FGFR1-203ENST00000341462 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
FGFR1-203ENST00000341462 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
FGFR1-203ENST00000341462 CHGAP10645 457 aaKnown RBP25.96■■□□□ 1.75
FGFR1-203ENST00000341462 NPM1P06748 294 aaKnown RBP eCLIP25.93■■□□□ 1.74
FGFR1-203ENST00000341462 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
FGFR1-203ENST00000341462 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
FGFR1-203ENST00000341462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.62■■□□□ 1.696e-7■■□□□ 13.1
FGFR1-203ENST00000341462 NPM2Q86SE8 214 aaKnown RBP25.61■■□□□ 1.69
FGFR1-203ENST00000341462 SCAF1Q9H7N4 1312 aaKnown RBP25.59■■□□□ 1.69
FGFR1-203ENST00000341462 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
FGFR1-203ENST00000341462 A0A0G2JS52 829 aa25.49■■□□□ 1.67
FGFR1-203ENST00000341462 CHIC2Q9UKJ5 165 aa25.49■■□□□ 1.67
FGFR1-203ENST00000341462 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
FGFR1-203ENST00000341462 SALL2Q9Y467 1007 aaPredicted RBP25.46■■□□□ 1.67
FGFR1-203ENST00000341462 PLEKHG5O94827 1062 aa25.45■■□□□ 1.66
FGFR1-203ENST00000341462 CHMP7Q8WUX9 453 aaPredicted RBP25.45■■□□□ 1.66
FGFR1-203ENST00000341462 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
FGFR1-203ENST00000341462 ACIN1Q9UKV3 1341 aaKnown RBP25.39■■□□□ 1.66
FGFR1-203ENST00000341462 FAM9BQ8IZU0 186 aa25.37■■□□□ 1.65
FGFR1-203ENST00000341462 FKBP8Q14318 412 aa25.35■■□□□ 1.65
FGFR1-203ENST00000341462 ZBTB7CA1YPR0 619 aa25.34■■□□□ 1.65
FGFR1-203ENST00000341462 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
FGFR1-203ENST00000341462 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
FGFR1-203ENST00000341462 ANP32AP39687 249 aaKnown RBP25.33■■□□□ 1.65
FGFR1-203ENST00000341462 KDM2AQ9Y2K7 1162 aa25.32■■□□□ 1.64
FGFR1-203ENST00000341462 DDX10Q13206 875 aaKnown RBP25.31■■□□□ 1.64
FGFR1-203ENST00000341462 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
FGFR1-203ENST00000341462 HNRNPUQ00839 825 aaKnown RBP eCLIP25.27■■□□□ 1.644e-7■■□□□ 13.9
FGFR1-203ENST00000341462 C14orf37Q86TY3 774 aa25.26■■□□□ 1.63
FGFR1-203ENST00000341462 HSP90AA1P07900 732 aaKnown RBP25.22■■□□□ 1.63
FGFR1-203ENST00000341462 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
FGFR1-203ENST00000341462 ARID4BQ4LE39 1312 aaPredicted RBP25.19■■□□□ 1.62
FGFR1-203ENST00000341462 HIRIP3Q9BW71 556 aaPredicted RBP25.18■■□□□ 1.62
FGFR1-203ENST00000341462 MTUS2Q5JR59 1369 aa25.13■■□□□ 1.61
FGFR1-203ENST00000341462 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.61
FGFR1-203ENST00000341462 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
FGFR1-203ENST00000341462 HAP1P54257 671 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-203ENST00000341462 IRX6P78412 446 aaPredicted RBP25.08■■□□□ 1.61
FGFR1-203ENST00000341462 UPF2Q9HAU5 1272 aaKnown RBP25.04■■□□□ 1.6
FGFR1-203ENST00000341462 ARXQ96QS3 562 aa25.04■■□□□ 1.6
FGFR1-203ENST00000341462 SENP3-EIF4A1A0A087X0R7 540 aa25.02■■□□□ 1.6
FGFR1-203ENST00000341462 RRP7BPQ9NSQ0 103 aa25■■□□□ 1.59
FGFR1-203ENST00000341462 PLEKHD1A6NEE1 506 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms