RNA–Protein interactions for RNA: ENST00000322684.7

MSI2-202, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MSI2, Length 1,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-202ENST00000322684 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
MSI2-202ENST00000322684 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
MSI2-202ENST00000322684 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
MSI2-202ENST00000322684 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
MSI2-202ENST00000322684 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
MSI2-202ENST00000322684 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
MSI2-202ENST00000322684 ABCC9O60706 1549 aa27.4■■□□□ 1.98
MSI2-202ENST00000322684 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
MSI2-202ENST00000322684 NACADO15069 1562 aa27.12■■□□□ 1.93
MSI2-202ENST00000322684 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
MSI2-202ENST00000322684 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
MSI2-202ENST00000322684 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
MSI2-202ENST00000322684 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
MSI2-202ENST00000322684 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
MSI2-202ENST00000322684 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
MSI2-202ENST00000322684 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
MSI2-202ENST00000322684 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
MSI2-202ENST00000322684 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
MSI2-202ENST00000322684 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
MSI2-202ENST00000322684 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
MSI2-202ENST00000322684 WIZO95785 1651 aa25.66■■□□□ 1.7
MSI2-202ENST00000322684 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
MSI2-202ENST00000322684 PEG3Q9GZU2 1588 aa25.42■■□□□ 1.66
MSI2-202ENST00000322684 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
MSI2-202ENST00000322684 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
MSI2-202ENST00000322684 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
MSI2-202ENST00000322684 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
MSI2-202ENST00000322684 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
MSI2-202ENST00000322684 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
MSI2-202ENST00000322684 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
MSI2-202ENST00000322684 HMGXB3Q12766 1538 aa25■■□□□ 1.59
MSI2-202ENST00000322684 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
MSI2-202ENST00000322684 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
MSI2-202ENST00000322684 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
MSI2-202ENST00000322684 CFTRP13569 1480 aa24.54■■□□□ 1.52
MSI2-202ENST00000322684 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
MSI2-202ENST00000322684 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
MSI2-202ENST00000322684 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.5
MSI2-202ENST00000322684 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
MSI2-202ENST00000322684 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
MSI2-202ENST00000322684 PRDM2Q13029 1718 aa24.33■■□□□ 1.48
MSI2-202ENST00000322684 EEA1Q15075 1411 aa24.3■■□□□ 1.48
MSI2-202ENST00000322684 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
MSI2-202ENST00000322684 SOGA1O94964 1423 aa24.28■■□□□ 1.48
MSI2-202ENST00000322684 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
MSI2-202ENST00000322684 CUX1P39880 1505 aa24.19■■□□□ 1.46
MSI2-202ENST00000322684 CSRNP3Q8WYN3 585 aa24.18■■□□□ 1.46
MSI2-202ENST00000322684 RUSC2Q8N2Y8 1516 aa24.16■■□□□ 1.46
MSI2-202ENST00000322684 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
MSI2-202ENST00000322684 LAMC3Q9Y6N6 1575 aa24.14■■□□□ 1.46
MSI2-202ENST00000322684 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
MSI2-202ENST00000322684 NESP48681 1621 aa24.1■■□□□ 1.45
MSI2-202ENST00000322684 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
MSI2-202ENST00000322684 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
MSI2-202ENST00000322684 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
MSI2-202ENST00000322684 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
MSI2-202ENST00000322684 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
MSI2-202ENST00000322684 KIF21BO75037 1637 aa23.92■■□□□ 1.42
MSI2-202ENST00000322684 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
MSI2-202ENST00000322684 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
MSI2-202ENST00000322684 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
MSI2-202ENST00000322684 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
MSI2-202ENST00000322684 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
MSI2-202ENST00000322684 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
MSI2-202ENST00000322684 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
MSI2-202ENST00000322684 CUX2O14529 1486 aa23.79■■□□□ 1.4
MSI2-202ENST00000322684 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
MSI2-202ENST00000322684 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
MSI2-202ENST00000322684 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
MSI2-202ENST00000322684 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
MSI2-202ENST00000322684 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
MSI2-202ENST00000322684 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
MSI2-202ENST00000322684 IGF1RP08069 1367 aa23.71■■□□□ 1.39
MSI2-202ENST00000322684 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
MSI2-202ENST00000322684 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
MSI2-202ENST00000322684 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.37
MSI2-202ENST00000322684 CLIP1P30622 1438 aa23.56■■□□□ 1.36
MSI2-202ENST00000322684 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
MSI2-202ENST00000322684 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
MSI2-202ENST00000322684 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
MSI2-202ENST00000322684 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
MSI2-202ENST00000322684 WDR62O43379 1518 aa23.49■■□□□ 1.35
MSI2-202ENST00000322684 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
MSI2-202ENST00000322684 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
MSI2-202ENST00000322684 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
MSI2-202ENST00000322684 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
MSI2-202ENST00000322684 CUL7Q14999 1698 aa23.44■■□□□ 1.34
MSI2-202ENST00000322684 IFT140Q96RY7 1462 aa23.39■■□□□ 1.33
MSI2-202ENST00000322684 VPS8Q8N3P4 1428 aa23.38■■□□□ 1.33
MSI2-202ENST00000322684 RANGAP1P46060 587 aaPredicted RBP23.37■■□□□ 1.33
MSI2-202ENST00000322684 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
MSI2-202ENST00000322684 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
MSI2-202ENST00000322684 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.328e-7■■■■■ 28.4
MSI2-202ENST00000322684 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
MSI2-202ENST00000322684 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
MSI2-202ENST00000322684 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
MSI2-202ENST00000322684 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
MSI2-202ENST00000322684 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
MSI2-202ENST00000322684 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
MSI2-202ENST00000322684 APLP2Q06481 763 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms