RNA–Protein interactions for RNA: ENST00000397090.4

FGFR1-205, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-205ENST00000397090 NISCHQ9Y2I1 1504 aa51.55■■■■■ 5.84
FGFR1-205ENST00000397090 ABCC9O60706 1549 aa46.87■■■■■ 5.09
FGFR1-205ENST00000397090 CCDC180Q9P1Z9 1646 aa45.69■■■■■ 4.9
FGFR1-205ENST00000397090 DNAJC5BQ9UF47 199 aa45.1■■■■■ 4.81
FGFR1-205ENST00000397090 RB1CC1Q8TDY2 1594 aa44.08■■■■■ 4.65
FGFR1-205ENST00000397090 NACADO15069 1562 aa43.47■■■■■ 4.55
FGFR1-205ENST00000397090 PABPN1Q86U42 306 aaKnown RBP eCLIP43.44■■■■■ 4.54
FGFR1-205ENST00000397090 ZCCHC6Q5VYS8 1495 aaKnown RBP43.02■■■■■ 4.48
FGFR1-205ENST00000397090 UNC13AQ9UPW8 1703 aa42.99■■■■■ 4.47
FGFR1-205ENST00000397090 DCAF8L2P0C7V8 631 aa42.98■■■■■ 4.47
FGFR1-205ENST00000397090 MYO15BQ96JP2 1530 aa42.81■■■■■ 4.44
FGFR1-205ENST00000397090 BICRAQ9NZM4 1560 aa42.81■■■■■ 4.44
FGFR1-205ENST00000397090 DCAF1Q9Y4B6 1507 aa42.73■■■■■ 4.43
FGFR1-205ENST00000397090 DNAJC5Q9H3Z4 198 aa42.39■■■■■ 4.38
FGFR1-205ENST00000397090 CECR2Q9BXF3 1484 aa42.38■■■■■ 4.38
FGFR1-205ENST00000397090 CC2D2AQ9P2K1 1620 aa42.27■■■■■ 4.36
FGFR1-205ENST00000397090 SHROOM4Q9ULL8 1493 aa42.17■■■■■ 4.34
FGFR1-205ENST00000397090 EIF4G1Q04637 1599 aaKnown RBP41.88■■■■■ 4.29
FGFR1-205ENST00000397090 SCRIBQ14160 1630 aa41.65■■■■■ 4.26
FGFR1-205ENST00000397090 CUX2O14529 1486 aa40.96■■■■■ 4.15
FGFR1-205ENST00000397090 ERCC6Q03468 1493 aa40.59■■■■■ 4.09
FGFR1-205ENST00000397090 NCAPD3P42695 1498 aa40.17■■■■■ 4.02
FGFR1-205ENST00000397090 TRIM41Q8WV44 630 aa39.97■■■■□ 3.99
FGFR1-205ENST00000397090 BAZ1AQ9NRL2 1556 aaPredicted RBP39.95■■■■□ 3.99
FGFR1-205ENST00000397090 SMARCA4P51532 1647 aa39.91■■■■□ 3.98
FGFR1-205ENST00000397090 NESP48681 1621 aa39.89■■■■□ 3.98
FGFR1-205ENST00000397090 ATAD2BQ9ULI0 1458 aa39.84■■■■□ 3.97
FGFR1-205ENST00000397090 THOC2Q8NI27 1593 aaKnown RBP39.74■■■■□ 3.95
FGFR1-205ENST00000397090 HMGXB3Q12766 1538 aa39.73■■■■□ 3.95
FGFR1-205ENST00000397090 MROH2BQ7Z745 1585 aa39.7■■■■□ 3.95
FGFR1-205ENST00000397090 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
FGFR1-205ENST00000397090 PEG3Q9GZU2 1588 aa39.56■■■■□ 3.92
FGFR1-205ENST00000397090 LAMC3Q9Y6N6 1575 aa39.43■■■■□ 3.9
FGFR1-205ENST00000397090 RSF1Q96T23 1441 aaPredicted RBP39.4■■■■□ 3.9
FGFR1-205ENST00000397090 BAZ1BQ9UIG0 1483 aaKnown RBP39.39■■■■□ 3.9
FGFR1-205ENST00000397090 KIF21AQ7Z4S6 1674 aa39.3■■■■□ 3.88
FGFR1-205ENST00000397090 PDS5BQ9NTI5 1447 aa39.29■■■■□ 3.88
FGFR1-205ENST00000397090 WIZO95785 1651 aa39.24■■■■□ 3.87
FGFR1-205ENST00000397090 MRC2Q9UBG0 1479 aa39■■■■□ 3.83
FGFR1-205ENST00000397090 WDR62O43379 1518 aa38.94■■■■□ 3.82
FGFR1-205ENST00000397090 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
FGFR1-205ENST00000397090 OSCARQ8IYS5 282 aa38.89■■■■□ 3.82
FGFR1-205ENST00000397090 CADPSQ9ULU8 1353 aa38.88■■■■□ 3.81
FGFR1-205ENST00000397090 CEP164Q9UPV0 1460 aa38.59■■■■□ 3.77
FGFR1-205ENST00000397090 SUPT5HO00267 1087 aaKnown RBP38.58■■■■□ 3.77
FGFR1-205ENST00000397090 RIMBP3CA6NJZ7 1639 aa38.46■■■■□ 3.75
FGFR1-205ENST00000397090 RIMBP3BA6NNM3 1639 aa38.46■■■■□ 3.75
FGFR1-205ENST00000397090 RIMBP3Q9UFD9 1639 aa38.46■■■■□ 3.75
FGFR1-205ENST00000397090 CCDC88BA6NC98 1476 aa38.45■■■■□ 3.75
FGFR1-205ENST00000397090 FANCD2Q9BXW9 1451 aa38.43■■■■□ 3.74
FGFR1-205ENST00000397090 CFTRP13569 1480 aa38.29■■■■□ 3.72
FGFR1-205ENST00000397090 ARHGEF11O15085 1522 aa38.23■■■■□ 3.71
FGFR1-205ENST00000397090 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
FGFR1-205ENST00000397090 CYB5RLQ6IPT4 315 aa38.05■■■■□ 3.68
FGFR1-205ENST00000397090 TRHP20396 242 aaPredicted RBP38.04■■■■□ 3.68
FGFR1-205ENST00000397090 PRDM2Q13029 1718 aa37.92■■■■□ 3.66
FGFR1-205ENST00000397090 ZNF608Q9ULD9 1512 aaPredicted RBP37.91■■■■□ 3.66
FGFR1-205ENST00000397090 AEBP2Q6ZN18 517 aaPredicted RBP37.89■■■■□ 3.66
FGFR1-205ENST00000397090 IFT140Q96RY7 1462 aa37.88■■■■□ 3.65
FGFR1-205ENST00000397090 ARAP1Q96P48 1450 aa37.77■■■■□ 3.64
FGFR1-205ENST00000397090 EIF4G3O43432 1585 aaKnown RBP37.63■■■■□ 3.61
FGFR1-205ENST00000397090 CHD1O14646 1710 aa37.56■■■■□ 3.6
FGFR1-205ENST00000397090 TOPBP1Q92547 1522 aa37.55■■■■□ 3.6
FGFR1-205ENST00000397090 ABCC8Q09428 1581 aa37.49■■■■□ 3.59
FGFR1-205ENST00000397090 FBLN2P98095 1184 aa37.45■■■■□ 3.59
FGFR1-205ENST00000397090 AQRO60306 1485 aaKnown RBP eCLIP37.42■■■■□ 3.58
FGFR1-205ENST00000397090 DNMBPQ6XZF7 1577 aa37.41■■■■□ 3.58
FGFR1-205ENST00000397090 TARBP1Q13395 1621 aaKnown RBP37.29■■■■□ 3.56
FGFR1-205ENST00000397090 CUX1P39880 1505 aa37.23■■■■□ 3.55
FGFR1-205ENST00000397090 WRNQ14191 1432 aaPredicted RBP eCLIP37.15■■■■□ 3.54
FGFR1-205ENST00000397090 CLASP1Q7Z460 1538 aa37.14■■■■□ 3.54
FGFR1-205ENST00000397090 POLA1P09884 1462 aaPredicted RBP37.12■■■■□ 3.53
FGFR1-205ENST00000397090 FGD5Q6ZNL6 1462 aa37.07■■■■□ 3.52
FGFR1-205ENST00000397090 SYNJ1O43426 1573 aa37.02■■■■□ 3.52
FGFR1-205ENST00000397090 TOP2BQ02880 1626 aa37.01■■■■□ 3.52
FGFR1-205ENST00000397090 TDRD9Q8NDG6 1382 aaKnown RBP37■■■■□ 3.51
FGFR1-205ENST00000397090 SNAPC4Q5SXM2 1469 aa37■■■■□ 3.51
FGFR1-205ENST00000397090 BIVM-ERCC5R4GMW8 1640 aa36.99■■■■□ 3.51
FGFR1-205ENST00000397090 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
FGFR1-205ENST00000397090 SOGA1O94964 1423 aa36.98■■■■□ 3.51
FGFR1-205ENST00000397090 RAD54L2Q9Y4B4 1467 aa36.96■■■■□ 3.51
FGFR1-205ENST00000397090 GAPVD1Q14C86 1478 aa36.87■■■■□ 3.49
FGFR1-205ENST00000397090 MAGI1Q96QZ7 1491 aaPredicted RBP36.87■■■■□ 3.49
FGFR1-205ENST00000397090 WDR97A6NE52 1622 aa36.86■■■■□ 3.49
FGFR1-205ENST00000397090 SYNJ2O15056 1496 aa36.77■■■■□ 3.48
FGFR1-205ENST00000397090 ABCA10Q8WWZ4 1543 aa36.76■■■■□ 3.48
FGFR1-205ENST00000397090 GRIN2BQ13224 1484 aa36.74■■■■□ 3.47
FGFR1-205ENST00000397090 ABCA5Q8WWZ7 1642 aa36.55■■■■□ 3.44
FGFR1-205ENST00000397090 ERCC6L2Q5T890 1561 aa36.44■■■■□ 3.42
FGFR1-205ENST00000397090 PBRM1Q86U86 1689 aa36.44■■■■□ 3.42
FGFR1-205ENST00000397090 ILDR1Q86SU0 546 aaPredicted RBP36.38■■■■□ 3.41
FGFR1-205ENST00000397090 KIF27Q86VH2 1401 aa36.37■■■■□ 3.41
FGFR1-205ENST00000397090 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
FGFR1-205ENST00000397090 ERICH3Q5RHP9 1530 aa36.33■■■■□ 3.41
FGFR1-205ENST00000397090 CEP170Q5SW79 1584 aa36.3■■■■□ 3.4
FGFR1-205ENST00000397090 GRIN2AQ12879 1464 aa36.26■■■■□ 3.4
FGFR1-205ENST00000397090 CHIC1Q5VXU3 224 aa36.23■■■■□ 3.39
FGFR1-205ENST00000397090 NUP160Q12769 1436 aa36.19■■■■□ 3.38
FGFR1-205ENST00000397090 ADAMTS12P58397 1594 aa36.18■■■■□ 3.38
FGFR1-205ENST00000397090 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms