RNA–Protein interactions for RNA: ENST00000398518.6

MEG3-204, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 1,674 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-204ENST00000398518 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.52
MEG3-204ENST00000398518 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
MEG3-204ENST00000398518 ABCC9O60706 1549 aa32.09■■■□□ 2.73
MEG3-204ENST00000398518 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
MEG3-204ENST00000398518 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
MEG3-204ENST00000398518 NACADO15069 1562 aa30.83■■■□□ 2.53
MEG3-204ENST00000398518 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
MEG3-204ENST00000398518 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
MEG3-204ENST00000398518 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.49
MEG3-204ENST00000398518 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.47
MEG3-204ENST00000398518 SCRIBQ14160 1630 aa30.14■■■□□ 2.42
MEG3-204ENST00000398518 BICRAQ9NZM4 1560 aa30.13■■■□□ 2.41
MEG3-204ENST00000398518 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
MEG3-204ENST00000398518 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
MEG3-204ENST00000398518 DNAJC5BQ9UF47 199 aa29.35■■■□□ 2.29
MEG3-204ENST00000398518 EIF4G1Q04637 1599 aaKnown RBP29.23■■■□□ 2.27
MEG3-204ENST00000398518 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
MEG3-204ENST00000398518 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.23
MEG3-204ENST00000398518 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
MEG3-204ENST00000398518 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
MEG3-204ENST00000398518 MROH2BQ7Z745 1585 aa28.65■■■□□ 2.18
MEG3-204ENST00000398518 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
MEG3-204ENST00000398518 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
MEG3-204ENST00000398518 SMARCA2P51531 1590 aa28.45■■■□□ 2.14
MEG3-204ENST00000398518 NCAPD3P42695 1498 aa28.44■■■□□ 2.14
MEG3-204ENST00000398518 WIZO95785 1651 aa28.41■■■□□ 2.14
MEG3-204ENST00000398518 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
MEG3-204ENST00000398518 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
MEG3-204ENST00000398518 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
MEG3-204ENST00000398518 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
MEG3-204ENST00000398518 NESP48681 1621 aa27.89■■■□□ 2.06
MEG3-204ENST00000398518 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
MEG3-204ENST00000398518 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
MEG3-204ENST00000398518 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
MEG3-204ENST00000398518 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
MEG3-204ENST00000398518 PRDM2Q13029 1718 aa27.54■■■□□ 2
MEG3-204ENST00000398518 CFTRP13569 1480 aa27.52■■■□□ 2
MEG3-204ENST00000398518 ERCC6Q03468 1493 aa27.51■■□□□ 1.99
MEG3-204ENST00000398518 SUPT5HO00267 1087 aaKnown RBP27.51■■□□□ 1.99
MEG3-204ENST00000398518 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
MEG3-204ENST00000398518 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
MEG3-204ENST00000398518 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
MEG3-204ENST00000398518 CEP164Q9UPV0 1460 aa27.27■■□□□ 1.96
MEG3-204ENST00000398518 MRC2Q9UBG0 1479 aa27.21■■□□□ 1.95
MEG3-204ENST00000398518 WDR62O43379 1518 aa27.21■■□□□ 1.95
MEG3-204ENST00000398518 CUX2O14529 1486 aa27.19■■□□□ 1.94
MEG3-204ENST00000398518 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
MEG3-204ENST00000398518 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
MEG3-204ENST00000398518 DNMBPQ6XZF7 1577 aa26.95■■□□□ 1.9
MEG3-204ENST00000398518 CUX1P39880 1505 aa26.87■■□□□ 1.89
MEG3-204ENST00000398518 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
MEG3-204ENST00000398518 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
MEG3-204ENST00000398518 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
MEG3-204ENST00000398518 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
MEG3-204ENST00000398518 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.87
MEG3-204ENST00000398518 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.86
MEG3-204ENST00000398518 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
MEG3-204ENST00000398518 WDR97A6NE52 1622 aa26.67■■□□□ 1.86
MEG3-204ENST00000398518 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
MEG3-204ENST00000398518 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
MEG3-204ENST00000398518 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
MEG3-204ENST00000398518 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.85
MEG3-204ENST00000398518 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.85
MEG3-204ENST00000398518 SOGA1O94964 1423 aa26.49■■□□□ 1.83
MEG3-204ENST00000398518 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.83
MEG3-204ENST00000398518 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
MEG3-204ENST00000398518 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
MEG3-204ENST00000398518 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
MEG3-204ENST00000398518 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.82
MEG3-204ENST00000398518 CHD1O14646 1710 aa26.34■■□□□ 1.81
MEG3-204ENST00000398518 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
MEG3-204ENST00000398518 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
MEG3-204ENST00000398518 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
MEG3-204ENST00000398518 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
MEG3-204ENST00000398518 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.78
MEG3-204ENST00000398518 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
MEG3-204ENST00000398518 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
MEG3-204ENST00000398518 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
MEG3-204ENST00000398518 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
MEG3-204ENST00000398518 CLASP1Q7Z460 1538 aa25.97■■□□□ 1.75
MEG3-204ENST00000398518 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
MEG3-204ENST00000398518 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
MEG3-204ENST00000398518 OSCARQ8IYS5 282 aa25.93■■□□□ 1.74
MEG3-204ENST00000398518 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
MEG3-204ENST00000398518 FBLN2P98095 1184 aa25.93■■□□□ 1.74
MEG3-204ENST00000398518 CUL7Q14999 1698 aa25.92■■□□□ 1.74
MEG3-204ENST00000398518 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
MEG3-204ENST00000398518 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
MEG3-204ENST00000398518 IGF1RP08069 1367 aa25.88■■□□□ 1.73
MEG3-204ENST00000398518 RIMBP3CA6NJZ7 1639 aa25.84■■□□□ 1.73
MEG3-204ENST00000398518 RIMBP3BA6NNM3 1639 aa25.84■■□□□ 1.73
MEG3-204ENST00000398518 RIMBP3Q9UFD9 1639 aa25.84■■□□□ 1.73
MEG3-204ENST00000398518 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
MEG3-204ENST00000398518 NUP160Q12769 1436 aa25.82■■□□□ 1.72
MEG3-204ENST00000398518 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
MEG3-204ENST00000398518 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
MEG3-204ENST00000398518 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
MEG3-204ENST00000398518 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
MEG3-204ENST00000398518 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
MEG3-204ENST00000398518 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms