Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 KIF20B-204ENST00000478929 4900 ntTSL 1 (best)1.09□□□□□ -2.234e-6■■□□□ 13.1
AARSP49588 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.384e-6■■□□□ 13.1
AARSP49588 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.242e-6■■□□□ 13
AARSP49588 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.382e-6■■□□□ 13
AARSP49588 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.859e-7■■□□□ 13
AARSP49588 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.49e-7■■□□□ 13
AARSP49588 HERC2-207ENST00000564734 3121 ntTSL 1 (best)16.88■□□□□ 0.293e-6■■□□□ 13
AARSP49588 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.443e-6■■□□□ 12.9
AARSP49588 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.863e-6■■□□□ 12.9
AARSP49588 KTN1-208ENST00000459737 4793 ntTSL 1 (best)2.93□□□□□ -1.943e-6■■□□□ 12.9
AARSP49588 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -23e-6■■□□□ 12.9
AARSP49588 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.073e-6■■□□□ 12.9
AARSP49588 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.13e-6■■□□□ 12.9
AARSP49588 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.163e-6■■□□□ 12.9
AARSP49588 NOP56-215ENST00000490753 640 ntTSL 210.54□□□□□ -0.722e-33■■□□□ 12.9
AARSP49588 NOP56-211ENST00000471023 592 ntTSL 28.05□□□□□ -1.122e-33■■□□□ 12.9
AARSP49588 NOP56-212ENST00000480447 651 ntTSL 26.78□□□□□ -1.322e-33■■□□□ 12.9
AARSP49588 SNORD57-201ENST00000448188 72 ntBASIC-0.76□□□□□ -2.532e-33■■□□□ 12.9
AARSP49588 PICALM-215ENST00000531558 565 ntTSL 527.94■■■□□ 2.067e-7■■□□□ 12.9
AARSP49588 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.5■■□□□ 1.837e-7■■□□□ 12.9
AARSP49588 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.777e-7■■□□□ 12.9
AARSP49588 PICALM-218ENST00000532041 699 ntTSL 325.22■■□□□ 1.637e-7■■□□□ 12.9
AARSP49588 PITX1-203ENST00000503586 624 ntTSL 325.17■■□□□ 1.627e-7■■□□□ 12.9
AARSP49588 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.577e-7■■□□□ 12.9
AARSP49588 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.277e-7■■□□□ 12.9
AARSP49588 PITX1-204ENST00000504936 770 ntTSL 220.5■□□□□ 0.877e-7■■□□□ 12.9
AARSP49588 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.577e-7■■□□□ 12.9
AARSP49588 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.05■□□□□ 0.487e-7■■□□□ 12.9
AARSP49588 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.427e-7■■□□□ 12.9
AARSP49588 ZDHHC8-204ENST00000436518 557 ntTSL 417.17■□□□□ 0.347e-7■■□□□ 12.9
AARSP49588 PICALM-210ENST00000528411 586 ntTSL 516.26■□□□□ 0.197e-7■■□□□ 12.9
AARSP49588 ZDHHC8-205ENST00000468112 524 ntTSL 315.51■□□□□ 0.077e-7■■□□□ 12.9
AARSP49588 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.067e-7■■□□□ 12.9
AARSP49588 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.59□□□□□ -1.037e-7■■□□□ 12.9
AARSP49588 PICALM-203ENST00000525162 548 ntTSL 48.31□□□□□ -1.087e-7■■□□□ 12.9
AARSP49588 PICALM-223ENST00000534412 811 ntTSL 56.55□□□□□ -1.367e-7■■□□□ 12.9
AARSP49588 PICALM-217ENST00000531930 703 ntTSL 55.83□□□□□ -1.487e-7■■□□□ 12.9
AARSP49588 PICALM-208ENST00000528256 563 ntTSL 45.78□□□□□ -1.487e-7■■□□□ 12.9
AARSP49588 ABL1-203ENST00000393293 532 ntTSL 55.62□□□□□ -1.517e-7■■□□□ 12.9
AARSP49588 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.66□□□□□ -1.827e-7■■□□□ 12.9
AARSP49588 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.31e-323■■□□□ 12.8
AARSP49588 HMGB2-205ENST00000511316 1841 ntTSL 214.29□□□□□ -0.121e-323■■□□□ 12.8
AARSP49588 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.321e-323■■□□□ 12.8
AARSP49588 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.111e-323■■□□□ 12.8
AARSP49588 RPL23A-209ENST00000582736 595 ntTSL 1 (best)15.85■□□□□ 0.136e-43■■□□□ 12.8
AARSP49588 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.274e-7■■□□□ 12.8
AARSP49588 SNORD42B-201ENST00000458893 67 ntBASIC0.12□□□□□ -2.396e-43■■□□□ 12.8
AARSP49588 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.678e-7■■□□□ 12.8
AARSP49588 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.748e-7■■□□□ 12.8
AARSP49588 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.57■■□□□ 1.528e-7■■□□□ 12.8
AARSP49588 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.378e-7■■□□□ 12.8
AARSP49588 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.198e-7■■□□□ 12.8
AARSP49588 ARVCF-206ENST00000467828 258 ntTSL 320.83■□□□□ 0.937e-6■■□□□ 12.8
AARSP49588 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.167e-6■■□□□ 12.8
AARSP49588 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.95e-9■■□□□ 12.8
AARSP49588 OAZ1-210ENST00000593012 1357 ntTSL 219.29■□□□□ 0.685e-9■■□□□ 12.8
AARSP49588 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.545e-9■■□□□ 12.8
AARSP49588 OAZ1-201ENST00000581150 1131 ntTSL 517.92■□□□□ 0.465e-9■■□□□ 12.8
AARSP49588 OAZ1-209ENST00000592787 857 ntTSL 217.62■□□□□ 0.415e-9■■□□□ 12.8
AARSP49588 OAZ1-207ENST00000590943 1012 ntTSL 217.4■□□□□ 0.385e-9■■□□□ 12.8
AARSP49588 UBAP2L-210ENST00000441890 678 ntTSL 218.67■□□□□ 0.582e-11■■□□□ 12.8
AARSP49588 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.626e-6■■□□□ 12.7
AARSP49588 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.453e-56■■□□□ 12.7
AARSP49588 NCAPD2-202ENST00000382457 2844 ntTSL 512.06□□□□□ -0.483e-56■■□□□ 12.7
AARSP49588 NCAPD2-207ENST00000539084 4290 ntTSL 211.13□□□□□ -0.633e-56■■□□□ 12.7
AARSP49588 NCAPD2-208ENST00000539714 533 ntTSL 37.36□□□□□ -1.233e-56■■□□□ 12.7
AARSP49588 NCAPD2-210ENST00000541399 584 ntTSL 57.31□□□□□ -1.243e-56■■□□□ 12.7
AARSP49588 SCARNA10-201ENST00000459255 330 ntBASIC4.98□□□□□ -1.613e-56■■□□□ 12.7
AARSP49588 AC006064.5-201ENST00000541782 248 ntBASIC4.57□□□□□ -1.683e-56■■□□□ 12.7
AARSP49588 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.56□□□□□ -1.362e-7■■□□□ 12.7
AARSP49588 MTHFR-217ENST00000641820 1569 ntBASIC17.9■□□□□ 0.463e-8■■□□□ 12.6
AARSP49588 DNMT1-229ENST00000593049 534 ntTSL 417.78■□□□□ 0.443e-8■■□□□ 12.6
AARSP49588 DNMT1-221ENST00000589538 559 ntTSL 517.78■□□□□ 0.443e-8■■□□□ 12.6
AARSP49588 HDDC2-210ENST00000609574 607 ntTSL 217.15■□□□□ 0.343e-8■■□□□ 12.6
AARSP49588 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.15■□□□□ 0.343e-8■■□□□ 12.6
AARSP49588 MACF1-223ENST00000496360 2080 ntTSL 217.11■□□□□ 0.333e-8■■□□□ 12.6
AARSP49588 MTHFR-210ENST00000641407 2387 ntBASIC16.24■□□□□ 0.193e-8■■□□□ 12.6
AARSP49588 MTHFR-216ENST00000641805 2945 nt15.83■□□□□ 0.123e-8■■□□□ 12.6
AARSP49588 MTHFR-212ENST00000641446 2820 nt15.27■□□□□ 0.043e-8■■□□□ 12.6
AARSP49588 MACF1-202ENST00000360115 2824 ntTSL 515.13■□□□□ 0.013e-8■■□□□ 12.6
AARSP49588 DNMT1-207ENST00000586588 3094 ntTSL 215.04■□□□□ -03e-8■■□□□ 12.6
AARSP49588 MACF1-207ENST00000442046 2299 ntTSL 514.45□□□□□ -0.13e-8■■□□□ 12.6
AARSP49588 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.24□□□□□ -0.133e-8■■□□□ 12.6
AARSP49588 MTHFR-215ENST00000641759 2454 nt14.02□□□□□ -0.173e-8■■□□□ 12.6
AARSP49588 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.263e-8■■□□□ 12.6
AARSP49588 DNMT1-228ENST00000592705 5215 ntTSL 1 (best)13.31□□□□□ -0.283e-8■■□□□ 12.6
AARSP49588 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.33e-8■■□□□ 12.6
AARSP49588 MTHFR-214ENST00000641747 3227 nt12.98□□□□□ -0.333e-8■■□□□ 12.6
AARSP49588 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.343e-8■■□□□ 12.6
AARSP49588 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.85□□□□□ -0.353e-8■■□□□ 12.6
AARSP49588 MACF1-208ENST00000446276 2559 ntTSL 512.66□□□□□ -0.383e-8■■□□□ 12.6
AARSP49588 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.413e-8■■□□□ 12.6
AARSP49588 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.443e-8■■□□□ 12.6
AARSP49588 MACF1-225ENST00000497807 2689 ntTSL 1 (best)12.2□□□□□ -0.463e-8■■□□□ 12.6
AARSP49588 MTHFR-213ENST00000641721 891 nt11.55□□□□□ -0.563e-8■■□□□ 12.6
AARSP49588 NAP1L4-210ENST00000492685 850 ntTSL 57.13□□□□□ -1.278e-7■■□□□ 12.6
AARSP49588 DNMT1-220ENST00000589351 672 ntTSL 25.98□□□□□ -1.453e-8■■□□□ 12.6
AARSP49588 RRP1-202ENST00000471909 2544 ntTSL 1 (best)19.05■□□□□ 0.649e-6■■□□□ 12.6
AARSP49588 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.39e-6■■□□□ 12.6
AARSP49588 RRP1-201ENST00000467112 3019 ntTSL 1 (best)16.73■□□□□ 0.279e-6■■□□□ 12.6
Retrieved 100 of 8,200 protein–RNA pairs in 116.8 ms