RNA–Protein interactions for RNA: ENST00000442046.5

MACF1-207, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-207ENST00000442046 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
MACF1-207ENST00000442046 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
MACF1-207ENST00000442046 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
MACF1-207ENST00000442046 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
MACF1-207ENST00000442046 ABCC9O60706 1549 aa25.38■■□□□ 1.65
MACF1-207ENST00000442046 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
MACF1-207ENST00000442046 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
MACF1-207ENST00000442046 NACADO15069 1562 aa25.15■■□□□ 1.62
MACF1-207ENST00000442046 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
MACF1-207ENST00000442046 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
MACF1-207ENST00000442046 SCRIBQ14160 1630 aa24.7■■□□□ 1.54
MACF1-207ENST00000442046 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
MACF1-207ENST00000442046 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
MACF1-207ENST00000442046 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
MACF1-207ENST00000442046 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
MACF1-207ENST00000442046 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
MACF1-207ENST00000442046 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
MACF1-207ENST00000442046 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
MACF1-207ENST00000442046 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
MACF1-207ENST00000442046 SMARCA4P51532 1647 aa23.75■■□□□ 1.39
MACF1-207ENST00000442046 WIZO95785 1651 aa23.6■■□□□ 1.37
MACF1-207ENST00000442046 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
MACF1-207ENST00000442046 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
MACF1-207ENST00000442046 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
MACF1-207ENST00000442046 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
MACF1-207ENST00000442046 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
MACF1-207ENST00000442046 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
MACF1-207ENST00000442046 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
MACF1-207ENST00000442046 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
MACF1-207ENST00000442046 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
MACF1-207ENST00000442046 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
MACF1-207ENST00000442046 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
MACF1-207ENST00000442046 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
MACF1-207ENST00000442046 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
MACF1-207ENST00000442046 CFTRP13569 1480 aa22.63■■□□□ 1.21
MACF1-207ENST00000442046 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
MACF1-207ENST00000442046 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
MACF1-207ENST00000442046 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
MACF1-207ENST00000442046 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
MACF1-207ENST00000442046 SYNJ1O43426 1573 aa22.39■■□□□ 1.17
MACF1-207ENST00000442046 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
MACF1-207ENST00000442046 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
MACF1-207ENST00000442046 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
MACF1-207ENST00000442046 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
MACF1-207ENST00000442046 NESP48681 1621 aa22.26■■□□□ 1.15
MACF1-207ENST00000442046 CUX1P39880 1505 aa22.25■■□□□ 1.15
MACF1-207ENST00000442046 EEA1Q15075 1411 aa22.25■■□□□ 1.15
MACF1-207ENST00000442046 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
MACF1-207ENST00000442046 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
MACF1-207ENST00000442046 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
MACF1-207ENST00000442046 SOGA1O94964 1423 aa22.12■■□□□ 1.13
MACF1-207ENST00000442046 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
MACF1-207ENST00000442046 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
MACF1-207ENST00000442046 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
MACF1-207ENST00000442046 TOPBP1Q92547 1522 aa22.05■■□□□ 1.12
MACF1-207ENST00000442046 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.12
MACF1-207ENST00000442046 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
MACF1-207ENST00000442046 CSRNP3Q8WYN3 585 aa22■■□□□ 1.11
MACF1-207ENST00000442046 URB2Q14146 1524 aaKnown RBP21.99■■□□□ 1.11
MACF1-207ENST00000442046 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
MACF1-207ENST00000442046 KIF21BO75037 1637 aa21.94■■□□□ 1.1
MACF1-207ENST00000442046 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
MACF1-207ENST00000442046 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
MACF1-207ENST00000442046 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
MACF1-207ENST00000442046 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
MACF1-207ENST00000442046 CUX2O14529 1486 aa21.86■■□□□ 1.09
MACF1-207ENST00000442046 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
MACF1-207ENST00000442046 WDR62O43379 1518 aa21.83■■□□□ 1.09
MACF1-207ENST00000442046 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
MACF1-207ENST00000442046 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
MACF1-207ENST00000442046 PRXQ9BXM0 1461 aa21.79■■□□□ 1.08
MACF1-207ENST00000442046 RAD54L2Q9Y4B4 1467 aa21.79■■□□□ 1.08
MACF1-207ENST00000442046 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
MACF1-207ENST00000442046 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
MACF1-207ENST00000442046 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
MACF1-207ENST00000442046 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
MACF1-207ENST00000442046 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
MACF1-207ENST00000442046 RAPGEF2Q9Y4G8 1499 aa21.71■■□□□ 1.07
MACF1-207ENST00000442046 IGF1RP08069 1367 aa21.7■■□□□ 1.06
MACF1-207ENST00000442046 CUL7Q14999 1698 aa21.68■■□□□ 1.06
MACF1-207ENST00000442046 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
MACF1-207ENST00000442046 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
MACF1-207ENST00000442046 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
MACF1-207ENST00000442046 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
MACF1-207ENST00000442046 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
MACF1-207ENST00000442046 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
MACF1-207ENST00000442046 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
MACF1-207ENST00000442046 CLIP1P30622 1438 aa21.48■■□□□ 1.03
MACF1-207ENST00000442046 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
MACF1-207ENST00000442046 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
MACF1-207ENST00000442046 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.021e-6■■■■□ 20.3
MACF1-207ENST00000442046 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
MACF1-207ENST00000442046 CTTNBP2Q8WZ74 1663 aa21.42■■□□□ 1.02
MACF1-207ENST00000442046 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
MACF1-207ENST00000442046 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
MACF1-207ENST00000442046 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
MACF1-207ENST00000442046 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
MACF1-207ENST00000442046 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
MACF1-207ENST00000442046 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
MACF1-207ENST00000442046 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms