RNA–Protein interactions for RNA: ENST00000467828.1

ARVCF-206, Transcript of ARVCF, delta catenin family member, humanhuman

TSL 3

Gene ARVCF, Length 258 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCF-206ENST00000467828 NISCHQ9Y2I1 1504 aa47.48■■■■■ 5.19
ARVCF-206ENST00000467828 CCDC180Q9P1Z9 1646 aa42.43■■■■■ 4.38
ARVCF-206ENST00000467828 ABCC9O60706 1549 aa41.83■■■■■ 4.29
ARVCF-206ENST00000467828 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
ARVCF-206ENST00000467828 NACADO15069 1562 aa39.89■■■■□ 3.98
ARVCF-206ENST00000467828 DCAF8L2P0C7V8 631 aa39.68■■■■□ 3.94
ARVCF-206ENST00000467828 MYO15BQ96JP2 1530 aa39.52■■■■□ 3.92
ARVCF-206ENST00000467828 ZCCHC6Q5VYS8 1495 aaKnown RBP39.52■■■■□ 3.92
ARVCF-206ENST00000467828 UNC13AQ9UPW8 1703 aa39.29■■■■□ 3.88
ARVCF-206ENST00000467828 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
ARVCF-206ENST00000467828 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.83
ARVCF-206ENST00000467828 BICRAQ9NZM4 1560 aa38.94■■■■□ 3.82
ARVCF-206ENST00000467828 SCRIBQ14160 1630 aa38.72■■■■□ 3.79
ARVCF-206ENST00000467828 DNAJC5BQ9UF47 199 aa38.68■■■■□ 3.78
ARVCF-206ENST00000467828 SHROOM4Q9ULL8 1493 aa38.38■■■■□ 3.73
ARVCF-206ENST00000467828 EIF4G1Q04637 1599 aaKnown RBP37.9■■■■□ 3.66
ARVCF-206ENST00000467828 CC2D2AQ9P2K1 1620 aa37.84■■■■□ 3.65
ARVCF-206ENST00000467828 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
ARVCF-206ENST00000467828 SMARCA4P51532 1647 aa36.98■■■■□ 3.51
ARVCF-206ENST00000467828 BAZ1AQ9NRL2 1556 aaPredicted RBP36.82■■■■□ 3.48
ARVCF-206ENST00000467828 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
ARVCF-206ENST00000467828 NCAPD3P42695 1498 aa36.79■■■■□ 3.48
ARVCF-206ENST00000467828 SMARCA2P51531 1590 aa36.73■■■■□ 3.47
ARVCF-206ENST00000467828 HMGXB3Q12766 1538 aa36.65■■■■□ 3.46
ARVCF-206ENST00000467828 MROH2BQ7Z745 1585 aa36.63■■■■□ 3.45
ARVCF-206ENST00000467828 PEG3Q9GZU2 1588 aa36.58■■■■□ 3.45
ARVCF-206ENST00000467828 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
ARVCF-206ENST00000467828 WIZO95785 1651 aa36.26■■■■□ 3.39
ARVCF-206ENST00000467828 NESP48681 1621 aa36.12■■■■□ 3.37
ARVCF-206ENST00000467828 RSF1Q96T23 1441 aaPredicted RBP36.03■■■■□ 3.36
ARVCF-206ENST00000467828 ERCC6Q03468 1493 aa36.03■■■■□ 3.36
ARVCF-206ENST00000467828 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
ARVCF-206ENST00000467828 TOP2AP11388 1531 aaKnown RBP35.8■■■■□ 3.32
ARVCF-206ENST00000467828 CUX2O14529 1486 aa35.78■■■■□ 3.32
ARVCF-206ENST00000467828 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
ARVCF-206ENST00000467828 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.31
ARVCF-206ENST00000467828 CADPSQ9ULU8 1353 aa35.68■■■■□ 3.3
ARVCF-206ENST00000467828 PDS5BQ9NTI5 1447 aa35.61■■■■□ 3.29
ARVCF-206ENST00000467828 CFTRP13569 1480 aa35.44■■■■□ 3.26
ARVCF-206ENST00000467828 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
ARVCF-206ENST00000467828 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
ARVCF-206ENST00000467828 FANCD2Q9BXW9 1451 aa35.34■■■■□ 3.25
ARVCF-206ENST00000467828 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
ARVCF-206ENST00000467828 WDR62O43379 1518 aa35.29■■■■□ 3.24
ARVCF-206ENST00000467828 PRDM2Q13029 1718 aa35.27■■■■□ 3.24
ARVCF-206ENST00000467828 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
ARVCF-206ENST00000467828 DNAJC5Q9H3Z4 198 aa35.02■■■■□ 3.2
ARVCF-206ENST00000467828 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
ARVCF-206ENST00000467828 TOPBP1Q92547 1522 aa34.76■■■■□ 3.15
ARVCF-206ENST00000467828 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.14
ARVCF-206ENST00000467828 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
ARVCF-206ENST00000467828 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
ARVCF-206ENST00000467828 ZNF608Q9ULD9 1512 aaPredicted RBP34.52■■■■□ 3.12
ARVCF-206ENST00000467828 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
ARVCF-206ENST00000467828 POLA1P09884 1462 aaPredicted RBP34.44■■■■□ 3.1
ARVCF-206ENST00000467828 EIF4G3O43432 1585 aaKnown RBP34.42■■■■□ 3.1
ARVCF-206ENST00000467828 CUX1P39880 1505 aa34.4■■■■□ 3.1
ARVCF-206ENST00000467828 FGD5Q6ZNL6 1462 aa34.31■■■■□ 3.08
ARVCF-206ENST00000467828 RAD54L2Q9Y4B4 1467 aa34.29■■■■□ 3.08
ARVCF-206ENST00000467828 AQRO60306 1485 aaKnown RBP eCLIP34.23■■■■□ 3.076e-7■■■■■ 27.2
ARVCF-206ENST00000467828 SOGA1O94964 1423 aa34.21■■■■□ 3.07
ARVCF-206ENST00000467828 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
ARVCF-206ENST00000467828 OSCARQ8IYS5 282 aa34.12■■■■□ 3.05
ARVCF-206ENST00000467828 TDRD9Q8NDG6 1382 aaKnown RBP34.1■■■■□ 3.05
ARVCF-206ENST00000467828 CHD1O14646 1710 aa34.07■■■■□ 3.05
ARVCF-206ENST00000467828 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
ARVCF-206ENST00000467828 SYNJ1O43426 1573 aa34.01■■■■□ 3.03
ARVCF-206ENST00000467828 TOP2BQ02880 1626 aa33.98■■■■□ 3.03
ARVCF-206ENST00000467828 WRNQ14191 1432 aaPredicted RBP eCLIP33.96■■■■□ 3.03
ARVCF-206ENST00000467828 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
ARVCF-206ENST00000467828 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
ARVCF-206ENST00000467828 PBRM1Q86U86 1689 aa33.92■■■■□ 3.02
ARVCF-206ENST00000467828 ABCA5Q8WWZ7 1642 aa33.91■■■■□ 3.02
ARVCF-206ENST00000467828 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
ARVCF-206ENST00000467828 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
ARVCF-206ENST00000467828 MAGI1Q96QZ7 1491 aaPredicted RBP33.84■■■■□ 3.01
ARVCF-206ENST00000467828 RIMBP3CA6NJZ7 1639 aa33.82■■■■□ 3
ARVCF-206ENST00000467828 RIMBP3BA6NNM3 1639 aa33.82■■■■□ 3
ARVCF-206ENST00000467828 RIMBP3Q9UFD9 1639 aa33.82■■■■□ 3
ARVCF-206ENST00000467828 FBLN2P98095 1184 aa33.81■■■■□ 3
ARVCF-206ENST00000467828 TRIM41Q8WV44 630 aa33.75■■■□□ 2.99
ARVCF-206ENST00000467828 ARHGEF11O15085 1522 aa33.74■■■□□ 2.99
ARVCF-206ENST00000467828 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
ARVCF-206ENST00000467828 CLASP1Q7Z460 1538 aa33.65■■■□□ 2.98
ARVCF-206ENST00000467828 CHMP7Q8WUX9 453 aaPredicted RBP33.63■■■□□ 2.97
ARVCF-206ENST00000467828 ADAMTS12P58397 1594 aa33.61■■■□□ 2.97
ARVCF-206ENST00000467828 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
ARVCF-206ENST00000467828 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
ARVCF-206ENST00000467828 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
ARVCF-206ENST00000467828 FHAD1B1AJZ9 1412 aa33.42■■■□□ 2.94
ARVCF-206ENST00000467828 CEP170Q5SW79 1584 aa33.39■■■□□ 2.94
ARVCF-206ENST00000467828 NUP160Q12769 1436 aa33.34■■■□□ 2.93
ARVCF-206ENST00000467828 CYB5RLQ6IPT4 315 aa33.32■■■□□ 2.92
ARVCF-206ENST00000467828 KIF27Q86VH2 1401 aa33.24■■■□□ 2.91
ARVCF-206ENST00000467828 ERCC6L2Q5T890 1561 aa33.2■■■□□ 2.91
ARVCF-206ENST00000467828 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
ARVCF-206ENST00000467828 CUL7Q14999 1698 aa33.18■■■□□ 2.9
ARVCF-206ENST00000467828 IGF1RP08069 1367 aa33.15■■■□□ 2.9
ARVCF-206ENST00000467828 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
ARVCF-206ENST00000467828 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms