RNA–Protein interactions for RNA: ENST00000630913.2

PICALM-224, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5 BASIC

Gene PICALM, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-224ENST00000630913 NISCHQ9Y2I1 1504 aa51.36■■■■■ 5.81
PICALM-224ENST00000630913 CCDC180Q9P1Z9 1646 aa44.28■■■■■ 4.68
PICALM-224ENST00000630913 ZCCHC6Q5VYS8 1495 aaKnown RBP43.15■■■■■ 4.5
PICALM-224ENST00000630913 DCAF8L2P0C7V8 631 aa43.08■■■■■ 4.49
PICALM-224ENST00000630913 SHROOM4Q9ULL8 1493 aa42.84■■■■■ 4.45
PICALM-224ENST00000630913 ABCC9O60706 1549 aa42.35■■■■■ 4.37
PICALM-224ENST00000630913 DCAF1Q9Y4B6 1507 aa42.09■■■■■ 4.33
PICALM-224ENST00000630913 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
PICALM-224ENST00000630913 SCRIBQ14160 1630 aa41.35■■■■■ 4.21
PICALM-224ENST00000630913 SUPT5HO00267 1087 aaKnown RBP41.32■■■■■ 4.2
PICALM-224ENST00000630913 NACADO15069 1562 aa41.29■■■■■ 4.2
PICALM-224ENST00000630913 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
PICALM-224ENST00000630913 CHIC1Q5VXU3 224 aa40.35■■■■■ 4.05
PICALM-224ENST00000630913 UNC13AQ9UPW8 1703 aa40.29■■■■■ 4.04
PICALM-224ENST00000630913 PABPN1Q86U42 306 aaKnown RBP eCLIP40.25■■■■■ 4.03
PICALM-224ENST00000630913 CECR2Q9BXF3 1484 aa40.22■■■■■ 4.03
PICALM-224ENST00000630913 RSF1Q96T23 1441 aaPredicted RBP40.12■■■■■ 4.01
PICALM-224ENST00000630913 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
PICALM-224ENST00000630913 MROH2BQ7Z745 1585 aa39.9■■■■□ 3.98
PICALM-224ENST00000630913 WIZO95785 1651 aa39.59■■■■□ 3.93
PICALM-224ENST00000630913 BAZ1AQ9NRL2 1556 aaPredicted RBP39.53■■■■□ 3.92
PICALM-224ENST00000630913 SMARCA4P51532 1647 aa39.4■■■■□ 3.9
PICALM-224ENST00000630913 HRCP23327 699 aa39.15■■■■□ 3.86
PICALM-224ENST00000630913 LOC105371045A0A1W2PR82 267 aa39.01■■■■□ 3.83
PICALM-224ENST00000630913 PCGF6Q9BYE7 350 aa38.97■■■■□ 3.83
PICALM-224ENST00000630913 TOP2AP11388 1531 aaKnown RBP38.91■■■■□ 3.82
PICALM-224ENST00000630913 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
PICALM-224ENST00000630913 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
PICALM-224ENST00000630913 PEG3Q9GZU2 1588 aa38.69■■■■□ 3.78
PICALM-224ENST00000630913 SMARCA2P51531 1590 aa38.68■■■■□ 3.78
PICALM-224ENST00000630913 EIF4G1Q04637 1599 aaKnown RBP38.67■■■■□ 3.78
PICALM-224ENST00000630913 TRIM41Q8WV44 630 aa38.57■■■■□ 3.76
PICALM-224ENST00000630913 BAZ1BQ9UIG0 1483 aaKnown RBP38.57■■■■□ 3.76
PICALM-224ENST00000630913 TRIM26Q12899 539 aaPredicted RBP38.38■■■■□ 3.74
PICALM-224ENST00000630913 FAM9AQ8IZU1 332 aaPredicted RBP38.25■■■■□ 3.71
PICALM-224ENST00000630913 NCAPD3P42695 1498 aa38.24■■■■□ 3.71
PICALM-224ENST00000630913 ABCC8Q09428 1581 aa38.22■■■■□ 3.71
PICALM-224ENST00000630913 PPARGC1BQ86YN6 1023 aaKnown RBP38.15■■■■□ 3.7
PICALM-224ENST00000630913 CC2D2AQ9P2K1 1620 aa38.09■■■■□ 3.69
PICALM-224ENST00000630913 HMGXB3Q12766 1538 aa38.09■■■■□ 3.69
PICALM-224ENST00000630913 EHMT2Q96KQ7 1210 aa38.03■■■■□ 3.68
PICALM-224ENST00000630913 DNAJC5BQ9UF47 199 aa37.71■■■■□ 3.63
PICALM-224ENST00000630913 WRNQ14191 1432 aaPredicted RBP eCLIP37.71■■■■□ 3.63
PICALM-224ENST00000630913 ZEB1P37275 1124 aaPredicted RBP37.62■■■■□ 3.61
PICALM-224ENST00000630913 SYNJ1O43426 1573 aa37.6■■■■□ 3.61
PICALM-224ENST00000630913 SOGA1O94964 1423 aa37.58■■■■□ 3.61
PICALM-224ENST00000630913 CFTRP13569 1480 aa37.54■■■■□ 3.6
PICALM-224ENST00000630913 RUSC2Q8N2Y8 1516 aa37.5■■■■□ 3.59
PICALM-224ENST00000630913 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
PICALM-224ENST00000630913 NESP48681 1621 aa37.32■■■■□ 3.56
PICALM-224ENST00000630913 CUX1P39880 1505 aa37.23■■■■□ 3.55
PICALM-224ENST00000630913 TOP2BQ02880 1626 aa37.21■■■■□ 3.55
PICALM-224ENST00000630913 CSRNP3Q8WYN3 585 aa37.19■■■■□ 3.54
PICALM-224ENST00000630913 EEA1Q15075 1411 aa37.17■■■■□ 3.54
PICALM-224ENST00000630913 BIVM-ERCC5R4GMW8 1640 aa37.08■■■■□ 3.53
PICALM-224ENST00000630913 PRDM2Q13029 1718 aa37.07■■■■□ 3.52
PICALM-224ENST00000630913 TNIKQ9UKE5 1360 aa37.06■■■■□ 3.52
PICALM-224ENST00000630913 CEP162Q5TB80 1403 aa37.06■■■■□ 3.52
PICALM-224ENST00000630913 FANCD2Q9BXW9 1451 aa37.06■■■■□ 3.52
PICALM-224ENST00000630913 UBTFP17480 764 aaKnown RBP36.94■■■■□ 3.5
PICALM-224ENST00000630913 GOLGA3Q08378 1498 aa36.85■■■■□ 3.49
PICALM-224ENST00000630913 LAMC3Q9Y6N6 1575 aa36.8■■■■□ 3.48
PICALM-224ENST00000630913 FGD5Q6ZNL6 1462 aa36.78■■■■□ 3.48
PICALM-224ENST00000630913 RAPGEF2Q9Y4G8 1499 aa36.72■■■■□ 3.47
PICALM-224ENST00000630913 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
PICALM-224ENST00000630913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.7■■■■□ 3.47
PICALM-224ENST00000630913 KIF21BO75037 1637 aa36.7■■■■□ 3.47
PICALM-224ENST00000630913 RANGAP1P46060 587 aaPredicted RBP36.7■■■■□ 3.47
PICALM-224ENST00000630913 TOPBP1Q92547 1522 aa36.66■■■■□ 3.46
PICALM-224ENST00000630913 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
PICALM-224ENST00000630913 CUX2O14529 1486 aa36.65■■■■□ 3.46
PICALM-224ENST00000630913 CCER1Q8TC90 406 aaPredicted RBP36.64■■■■□ 3.46
PICALM-224ENST00000630913 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
PICALM-224ENST00000630913 RAD54L2Q9Y4B4 1467 aa36.64■■■■□ 3.46
PICALM-224ENST00000630913 URB2Q14146 1524 aaKnown RBP36.62■■■■□ 3.45
PICALM-224ENST00000630913 KIF21AQ7Z4S6 1674 aa36.6■■■■□ 3.45
PICALM-224ENST00000630913 DNMBPQ6XZF7 1577 aa36.59■■■■□ 3.45
PICALM-224ENST00000630913 POLA1P09884 1462 aaPredicted RBP36.55■■■■□ 3.44
PICALM-224ENST00000630913 TTBK1Q5TCY1 1321 aaPredicted RBP36.48■■■■□ 3.43
PICALM-224ENST00000630913 PRXQ9BXM0 1461 aa36.47■■■■□ 3.43
PICALM-224ENST00000630913 IGF1RP08069 1367 aa36.44■■■■□ 3.42
PICALM-224ENST00000630913 CLIP1P30622 1438 aa36.36■■■■□ 3.41
PICALM-224ENST00000630913 TDRD9Q8NDG6 1382 aaKnown RBP36.3■■■■□ 3.4
PICALM-224ENST00000630913 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
PICALM-224ENST00000630913 VPS8Q8N3P4 1428 aa36.26■■■■□ 3.4
PICALM-224ENST00000630913 ERICH3Q5RHP9 1530 aa36.26■■■■□ 3.39
PICALM-224ENST00000630913 CARMIL1Q5VZK9 1371 aa36.24■■■■□ 3.39
PICALM-224ENST00000630913 MRC2Q9UBG0 1479 aa36.17■■■■□ 3.38
PICALM-224ENST00000630913 ERCC6Q03468 1493 aa36.14■■■■□ 3.38
PICALM-224ENST00000630913 WDR97A6NE52 1622 aa36.06■■■■□ 3.36
PICALM-224ENST00000630913 TARBP1Q13395 1621 aaKnown RBP36.01■■■■□ 3.36
PICALM-224ENST00000630913 GAPVD1Q14C86 1478 aa36.01■■■■□ 3.35
PICALM-224ENST00000630913 SCAF1Q9H7N4 1312 aaKnown RBP36■■■■□ 3.35
PICALM-224ENST00000630913 AQRO60306 1485 aaKnown RBP eCLIP35.99■■■■□ 3.351e-7■■■■■ 30.3
PICALM-224ENST00000630913 DIEXFQ68CQ4 756 aaKnown RBP35.97■■■■□ 3.35
PICALM-224ENST00000630913 ABCA5Q8WWZ7 1642 aa35.95■■■■□ 3.35
PICALM-224ENST00000630913 APLP2Q06481 763 aa35.91■■■■□ 3.34
PICALM-224ENST00000630913 ARAP1Q96P48 1450 aa35.91■■■■□ 3.34
PICALM-224ENST00000630913 WDR62O43379 1518 aa35.91■■■■□ 3.34
PICALM-224ENST00000630913 ZNF608Q9ULD9 1512 aaPredicted RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms