RNA–Protein interactions for RNA: ENST00000641446.1

MTHFR-212, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 2,820 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-212ENST00000641446 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
MTHFR-212ENST00000641446 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
MTHFR-212ENST00000641446 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
MTHFR-212ENST00000641446 HRCP23327 699 aa22.76■■□□□ 1.23
MTHFR-212ENST00000641446 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.23
MTHFR-212ENST00000641446 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
MTHFR-212ENST00000641446 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
MTHFR-212ENST00000641446 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
MTHFR-212ENST00000641446 PPARGC1BQ86YN6 1023 aaKnown RBP22.39■■□□□ 1.18
MTHFR-212ENST00000641446 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
MTHFR-212ENST00000641446 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
MTHFR-212ENST00000641446 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
MTHFR-212ENST00000641446 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
MTHFR-212ENST00000641446 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
MTHFR-212ENST00000641446 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
MTHFR-212ENST00000641446 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
MTHFR-212ENST00000641446 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
MTHFR-212ENST00000641446 ABCC9O60706 1549 aa21.42■■□□□ 1.02
MTHFR-212ENST00000641446 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
MTHFR-212ENST00000641446 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
MTHFR-212ENST00000641446 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
MTHFR-212ENST00000641446 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
MTHFR-212ENST00000641446 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
MTHFR-212ENST00000641446 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
MTHFR-212ENST00000641446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
MTHFR-212ENST00000641446 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
MTHFR-212ENST00000641446 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
MTHFR-212ENST00000641446 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
MTHFR-212ENST00000641446 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
MTHFR-212ENST00000641446 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
MTHFR-212ENST00000641446 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
MTHFR-212ENST00000641446 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
MTHFR-212ENST00000641446 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
MTHFR-212ENST00000641446 WIZO95785 1651 aa20.73■□□□□ 0.91
MTHFR-212ENST00000641446 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
MTHFR-212ENST00000641446 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
MTHFR-212ENST00000641446 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
MTHFR-212ENST00000641446 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
MTHFR-212ENST00000641446 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
MTHFR-212ENST00000641446 NACADO15069 1562 aa20.51■□□□□ 0.87
MTHFR-212ENST00000641446 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
MTHFR-212ENST00000641446 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
MTHFR-212ENST00000641446 YTHDC1Q96MU7 727 aaKnown RBP20.49■□□□□ 0.87
MTHFR-212ENST00000641446 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
MTHFR-212ENST00000641446 SOGA1O94964 1423 aa20.42■□□□□ 0.86
MTHFR-212ENST00000641446 UBTFP17480 764 aaKnown RBP20.39■□□□□ 0.85
MTHFR-212ENST00000641446 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
MTHFR-212ENST00000641446 MYT1Q01538 1121 aa20.32■□□□□ 0.84
MTHFR-212ENST00000641446 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
MTHFR-212ENST00000641446 MIER1Q8N108 512 aa20.31■□□□□ 0.84
MTHFR-212ENST00000641446 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
MTHFR-212ENST00000641446 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
MTHFR-212ENST00000641446 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
MTHFR-212ENST00000641446 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
MTHFR-212ENST00000641446 EEA1Q15075 1411 aa20.18■□□□□ 0.82
MTHFR-212ENST00000641446 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
MTHFR-212ENST00000641446 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
MTHFR-212ENST00000641446 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
MTHFR-212ENST00000641446 CLIP1P30622 1438 aa20.03■□□□□ 0.8
MTHFR-212ENST00000641446 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
MTHFR-212ENST00000641446 APLP2Q06481 763 aa19.99■□□□□ 0.79
MTHFR-212ENST00000641446 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
MTHFR-212ENST00000641446 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
MTHFR-212ENST00000641446 KIF21BO75037 1637 aa19.91■□□□□ 0.78
MTHFR-212ENST00000641446 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
MTHFR-212ENST00000641446 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
MTHFR-212ENST00000641446 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
MTHFR-212ENST00000641446 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
MTHFR-212ENST00000641446 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
MTHFR-212ENST00000641446 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
MTHFR-212ENST00000641446 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
MTHFR-212ENST00000641446 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
MTHFR-212ENST00000641446 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
MTHFR-212ENST00000641446 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
MTHFR-212ENST00000641446 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
MTHFR-212ENST00000641446 ITGAEP38570 1179 aa19.61■□□□□ 0.73
MTHFR-212ENST00000641446 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
MTHFR-212ENST00000641446 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
MTHFR-212ENST00000641446 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
MTHFR-212ENST00000641446 BCANQ96GW7 911 aa19.56■□□□□ 0.72
MTHFR-212ENST00000641446 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
MTHFR-212ENST00000641446 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
MTHFR-212ENST00000641446 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
MTHFR-212ENST00000641446 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
MTHFR-212ENST00000641446 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
MTHFR-212ENST00000641446 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
MTHFR-212ENST00000641446 CUX2O14529 1486 aa19.44■□□□□ 0.7
MTHFR-212ENST00000641446 FKBP8Q14318 412 aa19.43■□□□□ 0.7
MTHFR-212ENST00000641446 RAB3GAP2Q9H2M9 1393 aa19.42■□□□□ 0.7
MTHFR-212ENST00000641446 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
MTHFR-212ENST00000641446 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
MTHFR-212ENST00000641446 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
MTHFR-212ENST00000641446 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
MTHFR-212ENST00000641446 SIN3AQ96ST3 1273 aa19.34■□□□□ 0.69
MTHFR-212ENST00000641446 KIF27Q86VH2 1401 aa19.33■□□□□ 0.69
MTHFR-212ENST00000641446 CUX1P39880 1505 aa19.32■□□□□ 0.68
MTHFR-212ENST00000641446 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
MTHFR-212ENST00000641446 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
MTHFR-212ENST00000641446 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
MTHFR-212ENST00000641446 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms