RNA–Protein interactions for RNA: ENST00000641747.1

MTHFR-214, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 3,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-214ENST00000641747 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
MTHFR-214ENST00000641747 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
MTHFR-214ENST00000641747 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
MTHFR-214ENST00000641747 ABCC9O60706 1549 aa20.42■□□□□ 0.86
MTHFR-214ENST00000641747 SHROOM4Q9ULL8 1493 aa20.41■□□□□ 0.86
MTHFR-214ENST00000641747 ZCCHC6Q5VYS8 1495 aaKnown RBP20.34■□□□□ 0.85
MTHFR-214ENST00000641747 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
MTHFR-214ENST00000641747 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
MTHFR-214ENST00000641747 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
MTHFR-214ENST00000641747 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
MTHFR-214ENST00000641747 NACADO15069 1562 aa19.61■□□□□ 0.73
MTHFR-214ENST00000641747 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
MTHFR-214ENST00000641747 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
MTHFR-214ENST00000641747 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
MTHFR-214ENST00000641747 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
MTHFR-214ENST00000641747 HRCP23327 699 aa19.27■□□□□ 0.68
MTHFR-214ENST00000641747 PCGF6Q9BYE7 350 aa19.21■□□□□ 0.67
MTHFR-214ENST00000641747 MYT1Q01538 1121 aa19.17■□□□□ 0.66
MTHFR-214ENST00000641747 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
MTHFR-214ENST00000641747 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
MTHFR-214ENST00000641747 LOC105371045A0A1W2PR82 267 aa19■□□□□ 0.63
MTHFR-214ENST00000641747 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
MTHFR-214ENST00000641747 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
MTHFR-214ENST00000641747 RSF1Q96T23 1441 aaPredicted RBP18.94■□□□□ 0.62
MTHFR-214ENST00000641747 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
MTHFR-214ENST00000641747 WIZO95785 1651 aa18.75■□□□□ 0.59
MTHFR-214ENST00000641747 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
MTHFR-214ENST00000641747 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
MTHFR-214ENST00000641747 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
MTHFR-214ENST00000641747 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
MTHFR-214ENST00000641747 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
MTHFR-214ENST00000641747 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
MTHFR-214ENST00000641747 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
MTHFR-214ENST00000641747 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
MTHFR-214ENST00000641747 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
MTHFR-214ENST00000641747 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
MTHFR-214ENST00000641747 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
MTHFR-214ENST00000641747 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
MTHFR-214ENST00000641747 ZEB1P37275 1124 aaPredicted RBP18.34■□□□□ 0.53
MTHFR-214ENST00000641747 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
MTHFR-214ENST00000641747 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
MTHFR-214ENST00000641747 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
MTHFR-214ENST00000641747 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
MTHFR-214ENST00000641747 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
MTHFR-214ENST00000641747 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
MTHFR-214ENST00000641747 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
MTHFR-214ENST00000641747 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
MTHFR-214ENST00000641747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
MTHFR-214ENST00000641747 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
MTHFR-214ENST00000641747 NESP48681 1621 aa17.89■□□□□ 0.45
MTHFR-214ENST00000641747 PRKCSHP14314 528 aaPredicted RBP17.86■□□□□ 0.45
MTHFR-214ENST00000641747 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
MTHFR-214ENST00000641747 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
MTHFR-214ENST00000641747 BCL11AQ9H165 835 aa17.83■□□□□ 0.44
MTHFR-214ENST00000641747 CFTRP13569 1480 aa17.81■□□□□ 0.44
MTHFR-214ENST00000641747 SOGA1O94964 1423 aa17.76■□□□□ 0.43
MTHFR-214ENST00000641747 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
MTHFR-214ENST00000641747 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
MTHFR-214ENST00000641747 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
MTHFR-214ENST00000641747 UBTFP17480 764 aaKnown RBP17.72■□□□□ 0.43
MTHFR-214ENST00000641747 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
MTHFR-214ENST00000641747 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
MTHFR-214ENST00000641747 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
MTHFR-214ENST00000641747 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
MTHFR-214ENST00000641747 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
MTHFR-214ENST00000641747 TNIKQ9UKE5 1360 aa17.66■□□□□ 0.42
MTHFR-214ENST00000641747 CUX1P39880 1505 aa17.63■□□□□ 0.41
MTHFR-214ENST00000641747 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
MTHFR-214ENST00000641747 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
MTHFR-214ENST00000641747 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
MTHFR-214ENST00000641747 EEA1Q15075 1411 aa17.58■□□□□ 0.4
MTHFR-214ENST00000641747 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
MTHFR-214ENST00000641747 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
MTHFR-214ENST00000641747 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
MTHFR-214ENST00000641747 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
MTHFR-214ENST00000641747 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
MTHFR-214ENST00000641747 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
MTHFR-214ENST00000641747 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
MTHFR-214ENST00000641747 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
MTHFR-214ENST00000641747 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
MTHFR-214ENST00000641747 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
MTHFR-214ENST00000641747 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
MTHFR-214ENST00000641747 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.39
MTHFR-214ENST00000641747 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
MTHFR-214ENST00000641747 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
MTHFR-214ENST00000641747 CUX2O14529 1486 aa17.44■□□□□ 0.38
MTHFR-214ENST00000641747 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
MTHFR-214ENST00000641747 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
MTHFR-214ENST00000641747 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
MTHFR-214ENST00000641747 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
MTHFR-214ENST00000641747 CLIP1P30622 1438 aa17.39■□□□□ 0.37
MTHFR-214ENST00000641747 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
MTHFR-214ENST00000641747 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
MTHFR-214ENST00000641747 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
MTHFR-214ENST00000641747 APLP2Q06481 763 aa17.36■□□□□ 0.37
MTHFR-214ENST00000641747 RAPGEF2Q9Y4G8 1499 aa17.34■□□□□ 0.37
MTHFR-214ENST00000641747 KIF21BO75037 1637 aa17.33■□□□□ 0.36
MTHFR-214ENST00000641747 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
MTHFR-214ENST00000641747 MIER1Q8N108 512 aa17.29■□□□□ 0.36
MTHFR-214ENST00000641747 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms