Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.94■■■■□ 3.5not detected
AARSP49588 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36not detected
AARSP49588 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.9■■■■□ 3.34not detected
AARSP49588 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33not detected
AARSP49588 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31not detected
AARSP49588 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31not detected
AARSP49588 AL356512.1-201ENST00000607453 1739 ntBASIC35.67■■■■□ 3.3not detected
AARSP49588 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.41■■■■□ 3.26not detected
AARSP49588 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.24■■■■□ 3.23not detected
AARSP49588 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.88■■■■□ 3.17not detected
AARSP49588 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.74■■■■□ 3.15not detected
AARSP49588 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.73■■■■□ 3.15not detected
AARSP49588 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.58■■■■□ 3.13not detected
AARSP49588 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.47■■■■□ 3.11not detected
AARSP49588 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.43■■■■□ 3.1not detected
AARSP49588 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1not detected
AARSP49588 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09not detected
AARSP49588 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.33■■■■□ 3.09not detected
AARSP49588 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.3■■■■□ 3.08not detected
AARSP49588 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.27■■■■□ 3.08not detected
AARSP49588 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06not detected
AARSP49588 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.17■■■■□ 3.06not detected
AARSP49588 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.12■■■■□ 3.05not detected
AARSP49588 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.048e-8■□□□□ 9.4
AARSP49588 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.86■■■■□ 3.01not detected
AARSP49588 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97not detected
AARSP49588 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97not detected
AARSP49588 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.56■■■□□ 2.96not detected
AARSP49588 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.964e-6■■■■■ 30.6
AARSP49588 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.47■■■□□ 2.95not detected
AARSP49588 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.41■■■□□ 2.94not detected
AARSP49588 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93not detected
AARSP49588 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93not detected
AARSP49588 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.32■■■□□ 2.92not detected
AARSP49588 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92not detected
AARSP49588 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.29■■■□□ 2.92not detected
AARSP49588 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.917e-6■■□□□ 13.7
AARSP49588 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91not detected
AARSP49588 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.16■■■□□ 2.9not detected
AARSP49588 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.15■■■□□ 2.9not detected
AARSP49588 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89not detected
AARSP49588 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.06■■■□□ 2.88not detected
AARSP49588 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.96■■■□□ 2.87not detected
AARSP49588 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87not detected
AARSP49588 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87not detected
AARSP49588 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.92■■■□□ 2.86not detected
AARSP49588 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85not detected
AARSP49588 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84not detected
AARSP49588 AC015813.7-201ENST00000623294 581 ntBASIC32.68■■■□□ 2.82not detected
AARSP49588 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82not detected
AARSP49588 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81not detected
AARSP49588 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8not detected
AARSP49588 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8not detected
AARSP49588 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.48■■■□□ 2.79not detected
AARSP49588 AC006077.2-201ENST00000623591 457 ntBASIC32.42■■■□□ 2.78not detected
AARSP49588 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.42■■■□□ 2.78not detected
AARSP49588 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78not detected
AARSP49588 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.41■■■□□ 2.78not detected
AARSP49588 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.772e-7■■□□□ 14.2
AARSP49588 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77not detected
AARSP49588 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.773e-9■■■■■ 92.7
AARSP49588 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.36■■■□□ 2.77not detected
AARSP49588 ZNRF2P1-201ENST00000441407 443 ntBASIC32.31■■■□□ 2.76not detected
AARSP49588 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75not detected
AARSP49588 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.2■■■□□ 2.75not detected
AARSP49588 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75not detected
AARSP49588 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.2■■■□□ 2.74not detected
AARSP49588 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74not detected
AARSP49588 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.14■■■□□ 2.74not detected
AARSP49588 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.08■■■□□ 2.73not detected
AARSP49588 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.04■■■□□ 2.72not detected
AARSP49588 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72not detected
AARSP49588 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32■■■□□ 2.714e-6■■■■□ 24
AARSP49588 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71not detected
AARSP49588 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71not detected
AARSP49588 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7not detected
AARSP49588 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7not detected
AARSP49588 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69not detected
AARSP49588 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.88■■■□□ 2.69not detected
AARSP49588 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68not detected
AARSP49588 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68not detected
AARSP49588 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.76■■■□□ 2.68not detected
AARSP49588 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.678e-7■■□□□ 12.8
AARSP49588 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67not detected
AARSP49588 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.67■■■□□ 2.66not detected
AARSP49588 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66not detected
AARSP49588 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.61■■■□□ 2.65not detected
AARSP49588 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.6■■■□□ 2.65not detected
AARSP49588 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.654e-6■■■■■ 36.2
AARSP49588 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65not detected
AARSP49588 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64not detected
AARSP49588 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.54■■■□□ 2.64not detected
AARSP49588 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.53■■■□□ 2.64not detected
AARSP49588 AP002365.1-201ENST00000603448 772 ntBASIC31.52■■■□□ 2.64not detected
AARSP49588 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.49■■■□□ 2.63not detected
AARSP49588 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.47■■■□□ 2.63not detected
AARSP49588 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.46■■■□□ 2.63not detected
AARSP49588 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.43■■■□□ 2.621e-8■■■□□ 15.5
AARSP49588 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.621e-11■■■■□ 26.2
AARSP49588 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62not detected
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms