RNA–Protein interactions for RNA: ENST00000532041.5

PICALM-218, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-218ENST00000532041 NISCHQ9Y2I1 1504 aa58■■■■■ 6.88
PICALM-218ENST00000532041 CCDC180Q9P1Z9 1646 aa51.95■■■■■ 5.91
PICALM-218ENST00000532041 ABCC9O60706 1549 aa51.67■■■■■ 5.86
PICALM-218ENST00000532041 RB1CC1Q8TDY2 1594 aa49.27■■■■■ 5.48
PICALM-218ENST00000532041 NACADO15069 1562 aa49■■■■■ 5.43
PICALM-218ENST00000532041 DCAF8L2P0C7V8 631 aa48.67■■■■■ 5.38
PICALM-218ENST00000532041 MYO15BQ96JP2 1530 aa48.42■■■■■ 5.34
PICALM-218ENST00000532041 UNC13AQ9UPW8 1703 aa48.25■■■■■ 5.31
PICALM-218ENST00000532041 DNAJC5BQ9UF47 199 aa48.22■■■■■ 5.31
PICALM-218ENST00000532041 ZCCHC6Q5VYS8 1495 aaKnown RBP48.17■■■■■ 5.3
PICALM-218ENST00000532041 PABPN1Q86U42 306 aaKnown RBP eCLIP48.1■■■■■ 5.29
PICALM-218ENST00000532041 BICRAQ9NZM4 1560 aa47.92■■■■■ 5.26
PICALM-218ENST00000532041 DCAF1Q9Y4B6 1507 aa47.91■■■■■ 5.26
PICALM-218ENST00000532041 SCRIBQ14160 1630 aa47.38■■■■■ 5.17
PICALM-218ENST00000532041 SHROOM4Q9ULL8 1493 aa47.22■■■■■ 5.15
PICALM-218ENST00000532041 CC2D2AQ9P2K1 1620 aa46.7■■■■■ 5.07
PICALM-218ENST00000532041 EIF4G1Q04637 1599 aaKnown RBP46.68■■■■■ 5.06
PICALM-218ENST00000532041 CECR2Q9BXF3 1484 aa46.5■■■■■ 5.03
PICALM-218ENST00000532041 NCAPD3P42695 1498 aa45.23■■■■■ 4.83
PICALM-218ENST00000532041 SMARCA4P51532 1647 aa45.22■■■■■ 4.83
PICALM-218ENST00000532041 ATAD2BQ9ULI0 1458 aa45.17■■■■■ 4.82
PICALM-218ENST00000532041 SMARCA2P51531 1590 aa45.02■■■■■ 4.8
PICALM-218ENST00000532041 BAZ1AQ9NRL2 1556 aaPredicted RBP44.99■■■■■ 4.79
PICALM-218ENST00000532041 HMGXB3Q12766 1538 aa44.96■■■■■ 4.79
PICALM-218ENST00000532041 PEG3Q9GZU2 1588 aa44.77■■■■■ 4.76
PICALM-218ENST00000532041 BAZ1BQ9UIG0 1483 aaKnown RBP44.72■■■■■ 4.75
PICALM-218ENST00000532041 MROH2BQ7Z745 1585 aa44.72■■■■■ 4.75
PICALM-218ENST00000532041 ERCC6Q03468 1493 aa44.53■■■■■ 4.72
PICALM-218ENST00000532041 NESP48681 1621 aa44.5■■■■■ 4.71
PICALM-218ENST00000532041 CUX2O14529 1486 aa44.4■■■■■ 4.7
PICALM-218ENST00000532041 WIZO95785 1651 aa44.19■■■■■ 4.67
PICALM-218ENST00000532041 LAMC3Q9Y6N6 1575 aa44.18■■■■■ 4.66
PICALM-218ENST00000532041 THOC2Q8NI27 1593 aaKnown RBP44.03■■■■■ 4.64
PICALM-218ENST00000532041 DNAJC5Q9H3Z4 198 aa44■■■■■ 4.63
PICALM-218ENST00000532041 KIF21AQ7Z4S6 1674 aa43.94■■■■■ 4.63
PICALM-218ENST00000532041 RSF1Q96T23 1441 aaPredicted RBP43.86■■■■■ 4.61
PICALM-218ENST00000532041 PDS5BQ9NTI5 1447 aa43.86■■■■■ 4.61
PICALM-218ENST00000532041 CADPSQ9ULU8 1353 aa43.85■■■■■ 4.61
PICALM-218ENST00000532041 TOP2AP11388 1531 aaKnown RBP43.65■■■■■ 4.58
PICALM-218ENST00000532041 MRC2Q9UBG0 1479 aa43.54■■■■■ 4.56
PICALM-218ENST00000532041 WDR62O43379 1518 aa43.45■■■■■ 4.55
PICALM-218ENST00000532041 CFTRP13569 1480 aa43.45■■■■■ 4.55
PICALM-218ENST00000532041 CEP164Q9UPV0 1460 aa43.4■■■■■ 4.54
PICALM-218ENST00000532041 FANCD2Q9BXW9 1451 aa43.38■■■■■ 4.54
PICALM-218ENST00000532041 CCDC88BA6NC98 1476 aa43.13■■■■■ 4.49
PICALM-218ENST00000532041 PRDM2Q13029 1718 aa43.08■■■■■ 4.49
PICALM-218ENST00000532041 URB2Q14146 1524 aaKnown RBP43.07■■■■■ 4.48
PICALM-218ENST00000532041 TOPBP1Q92547 1522 aa42.61■■■■■ 4.41
PICALM-218ENST00000532041 IFT140Q96RY7 1462 aa42.51■■■■■ 4.4
PICALM-218ENST00000532041 DNMBPQ6XZF7 1577 aa42.49■■■■■ 4.39
PICALM-218ENST00000532041 ZNF608Q9ULD9 1512 aaPredicted RBP42.48■■■■■ 4.39
PICALM-218ENST00000532041 ABCC8Q09428 1581 aa42.44■■■■■ 4.39
PICALM-218ENST00000532041 OSCARQ8IYS5 282 aa42.3■■■■■ 4.36
PICALM-218ENST00000532041 EIF4G3O43432 1585 aaKnown RBP42.27■■■■■ 4.36
PICALM-218ENST00000532041 TARBP1Q13395 1621 aaKnown RBP42.24■■■■■ 4.35
PICALM-218ENST00000532041 POLA1P09884 1462 aaPredicted RBP42.21■■■■■ 4.35
PICALM-218ENST00000532041 TRIM41Q8WV44 630 aa42.18■■■■■ 4.34
PICALM-218ENST00000532041 AQRO60306 1485 aaKnown RBP eCLIP42.08■■■■■ 4.332e-8■■■■□ 24.2
PICALM-218ENST00000532041 RAD54L2Q9Y4B4 1467 aa42.04■■■■■ 4.32
PICALM-218ENST00000532041 SUPT5HO00267 1087 aaKnown RBP42.02■■■■■ 4.32
PICALM-218ENST00000532041 CUX1P39880 1505 aa42.01■■■■■ 4.32
PICALM-218ENST00000532041 FGD5Q6ZNL6 1462 aa41.98■■■■■ 4.31
PICALM-218ENST00000532041 SOGA1O94964 1423 aa41.95■■■■■ 4.31
PICALM-218ENST00000532041 CHD1O14646 1710 aa41.9■■■■■ 4.3
PICALM-218ENST00000532041 RIMBP3CA6NJZ7 1639 aa41.87■■■■■ 4.29
PICALM-218ENST00000532041 RIMBP3BA6NNM3 1639 aa41.87■■■■■ 4.29
PICALM-218ENST00000532041 RIMBP3Q9UFD9 1639 aa41.87■■■■■ 4.29
PICALM-218ENST00000532041 TDRD9Q8NDG6 1382 aaKnown RBP41.85■■■■■ 4.29
PICALM-218ENST00000532041 WDR97A6NE52 1622 aa41.79■■■■■ 4.28
PICALM-218ENST00000532041 ARHGEF11O15085 1522 aa41.77■■■■■ 4.28
PICALM-218ENST00000532041 SNAPC4Q5SXM2 1469 aa41.7■■■■■ 4.27
PICALM-218ENST00000532041 FBLN2P98095 1184 aa41.65■■■■■ 4.26
PICALM-218ENST00000532041 GRIN2BQ13224 1484 aa41.58■■■■■ 4.25
PICALM-218ENST00000532041 MAGI1Q96QZ7 1491 aaPredicted RBP41.56■■■■■ 4.24
PICALM-218ENST00000532041 ABCA10Q8WWZ4 1543 aa41.51■■■■■ 4.24
PICALM-218ENST00000532041 PBRM1Q86U86 1689 aa41.5■■■■■ 4.23
PICALM-218ENST00000532041 ABCA5Q8WWZ7 1642 aa41.47■■■■■ 4.23
PICALM-218ENST00000532041 GAPVD1Q14C86 1478 aa41.47■■■■■ 4.23
PICALM-218ENST00000532041 CLASP1Q7Z460 1538 aa41.44■■■■■ 4.23
PICALM-218ENST00000532041 SYNJ2O15056 1496 aa41.42■■■■■ 4.22
PICALM-218ENST00000532041 ARAP1Q96P48 1450 aa41.41■■■■■ 4.22
PICALM-218ENST00000532041 BIVM-ERCC5R4GMW8 1640 aa41.4■■■■■ 4.22
PICALM-218ENST00000532041 SYNJ1O43426 1573 aa41.38■■■■■ 4.22
PICALM-218ENST00000532041 TOP2BQ02880 1626 aa41.38■■■■■ 4.21
PICALM-218ENST00000532041 CHMP7Q8WUX9 453 aaPredicted RBP41.38■■■■■ 4.21
PICALM-218ENST00000532041 WRNQ14191 1432 aaPredicted RBP eCLIP41.35■■■■■ 4.21
PICALM-218ENST00000532041 CYB5RLQ6IPT4 315 aa41.32■■■■■ 4.21
PICALM-218ENST00000532041 ADAMTS12P58397 1594 aa41.15■■■■■ 4.18
PICALM-218ENST00000532041 GRIN2AQ12879 1464 aa41.07■■■■■ 4.16
PICALM-218ENST00000532041 ERICH3Q5RHP9 1530 aa40.98■■■■■ 4.15
PICALM-218ENST00000532041 CEP170Q5SW79 1584 aa40.96■■■■■ 4.15
PICALM-218ENST00000532041 FHAD1B1AJZ9 1412 aa40.94■■■■■ 4.14
PICALM-218ENST00000532041 NUP160Q12769 1436 aa40.94■■■■■ 4.14
PICALM-218ENST00000532041 ERCC6L2Q5T890 1561 aa40.84■■■■■ 4.13
PICALM-218ENST00000532041 SHROOM2Q13796 1616 aa40.75■■■■■ 4.11
PICALM-218ENST00000532041 TRHP20396 242 aaPredicted RBP40.74■■■■■ 4.11
PICALM-218ENST00000532041 RUSC2Q8N2Y8 1516 aa40.56■■■■■ 4.08
PICALM-218ENST00000532041 KIF27Q86VH2 1401 aa40.51■■■■■ 4.08
PICALM-218ENST00000532041 IGF1RP08069 1367 aa40.49■■■■■ 4.07
PICALM-218ENST00000532041 PRG4Q92954 1404 aaPredicted RBP40.47■■■■■ 4.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms