RNA–Protein interactions for RNA: ENST00000490753.1

NOP56-215, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-215ENST00000490753 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
NOP56-215ENST00000490753 ABCC9O60706 1549 aa22.63■■□□□ 1.21
NOP56-215ENST00000490753 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
NOP56-215ENST00000490753 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
NOP56-215ENST00000490753 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
NOP56-215ENST00000490753 NACADO15069 1562 aa21.26■□□□□ 0.99
NOP56-215ENST00000490753 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
NOP56-215ENST00000490753 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.943e-28■□□□□ 8.5
NOP56-215ENST00000490753 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
NOP56-215ENST00000490753 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
NOP56-215ENST00000490753 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
NOP56-215ENST00000490753 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
NOP56-215ENST00000490753 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
NOP56-215ENST00000490753 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
NOP56-215ENST00000490753 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
NOP56-215ENST00000490753 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
NOP56-215ENST00000490753 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
NOP56-215ENST00000490753 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
NOP56-215ENST00000490753 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
NOP56-215ENST00000490753 CUX2O14529 1486 aa19.61■□□□□ 0.73
NOP56-215ENST00000490753 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
NOP56-215ENST00000490753 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
NOP56-215ENST00000490753 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
NOP56-215ENST00000490753 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
NOP56-215ENST00000490753 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
NOP56-215ENST00000490753 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
NOP56-215ENST00000490753 NESP48681 1621 aa19.39■□□□□ 0.69
NOP56-215ENST00000490753 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
NOP56-215ENST00000490753 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
NOP56-215ENST00000490753 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
NOP56-215ENST00000490753 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
NOP56-215ENST00000490753 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
NOP56-215ENST00000490753 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
NOP56-215ENST00000490753 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
NOP56-215ENST00000490753 PDS5BQ9NTI5 1447 aa19.04■□□□□ 0.64
NOP56-215ENST00000490753 WIZO95785 1651 aa18.97■□□□□ 0.63
NOP56-215ENST00000490753 WDR62O43379 1518 aa18.96■□□□□ 0.63
NOP56-215ENST00000490753 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
NOP56-215ENST00000490753 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
NOP56-215ENST00000490753 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
NOP56-215ENST00000490753 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
NOP56-215ENST00000490753 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
NOP56-215ENST00000490753 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
NOP56-215ENST00000490753 CFTRP13569 1480 aa18.71■□□□□ 0.59
NOP56-215ENST00000490753 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
NOP56-215ENST00000490753 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
NOP56-215ENST00000490753 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
NOP56-215ENST00000490753 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
NOP56-215ENST00000490753 RIMBP3CA6NJZ7 1639 aa18.53■□□□□ 0.56
NOP56-215ENST00000490753 RIMBP3BA6NNM3 1639 aa18.53■□□□□ 0.56
NOP56-215ENST00000490753 RIMBP3Q9UFD9 1639 aa18.53■□□□□ 0.56
NOP56-215ENST00000490753 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
NOP56-215ENST00000490753 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
NOP56-215ENST00000490753 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
NOP56-215ENST00000490753 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
NOP56-215ENST00000490753 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
NOP56-215ENST00000490753 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
NOP56-215ENST00000490753 CHD1O14646 1710 aa18.4■□□□□ 0.54
NOP56-215ENST00000490753 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
NOP56-215ENST00000490753 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
NOP56-215ENST00000490753 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
NOP56-215ENST00000490753 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.517e-16■■■□□ 17.5
NOP56-215ENST00000490753 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
NOP56-215ENST00000490753 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
NOP56-215ENST00000490753 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
NOP56-215ENST00000490753 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
NOP56-215ENST00000490753 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
NOP56-215ENST00000490753 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
NOP56-215ENST00000490753 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
NOP56-215ENST00000490753 FBLN2P98095 1184 aa18.07■□□□□ 0.48
NOP56-215ENST00000490753 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
NOP56-215ENST00000490753 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
NOP56-215ENST00000490753 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
NOP56-215ENST00000490753 SOGA1O94964 1423 aa18.04■□□□□ 0.48
NOP56-215ENST00000490753 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
NOP56-215ENST00000490753 CUX1P39880 1505 aa18.03■□□□□ 0.48
NOP56-215ENST00000490753 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
NOP56-215ENST00000490753 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
NOP56-215ENST00000490753 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
NOP56-215ENST00000490753 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
NOP56-215ENST00000490753 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
NOP56-215ENST00000490753 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
NOP56-215ENST00000490753 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
NOP56-215ENST00000490753 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
NOP56-215ENST00000490753 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
NOP56-215ENST00000490753 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
NOP56-215ENST00000490753 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
NOP56-215ENST00000490753 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
NOP56-215ENST00000490753 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
NOP56-215ENST00000490753 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
NOP56-215ENST00000490753 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
NOP56-215ENST00000490753 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
NOP56-215ENST00000490753 NUP160Q12769 1436 aa17.7■□□□□ 0.42
NOP56-215ENST00000490753 KIF13AQ9H1H9 1805 aa17.7■□□□□ 0.42
NOP56-215ENST00000490753 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
NOP56-215ENST00000490753 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
NOP56-215ENST00000490753 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
NOP56-215ENST00000490753 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
NOP56-215ENST00000490753 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
NOP56-215ENST00000490753 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms