RNA–Protein interactions for RNA: ENST00000480447.5

NOP56-212, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-212ENST00000480447 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
NOP56-212ENST00000480447 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
NOP56-212ENST00000480447 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
NOP56-212ENST00000480447 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
NOP56-212ENST00000480447 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
NOP56-212ENST00000480447 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
NOP56-212ENST00000480447 CCDC180Q9P1Z9 1646 aa13.89□□□□□ -0.19
NOP56-212ENST00000480447 ABCC9O60706 1549 aa13.89□□□□□ -0.19
NOP56-212ENST00000480447 FOXD1Q16676 465 aa13.41□□□□□ -0.26
NOP56-212ENST00000480447 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
NOP56-212ENST00000480447 ADRA2BP18089 450 aa13.26□□□□□ -0.29
NOP56-212ENST00000480447 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
NOP56-212ENST00000480447 NACADO15069 1562 aa13.21□□□□□ -0.29
NOP56-212ENST00000480447 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
NOP56-212ENST00000480447 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
NOP56-212ENST00000480447 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
NOP56-212ENST00000480447 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.333e-28■□□□□ 8.5
NOP56-212ENST00000480447 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
NOP56-212ENST00000480447 SHROOM4Q9ULL8 1493 aa12.83□□□□□ -0.36
NOP56-212ENST00000480447 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
NOP56-212ENST00000480447 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
NOP56-212ENST00000480447 KCNA4P22459 653 aa12.77□□□□□ -0.37
NOP56-212ENST00000480447 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
NOP56-212ENST00000480447 PIAS4Q8N2W9 510 aaPredicted RBP12.76□□□□□ -0.37
NOP56-212ENST00000480447 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
NOP56-212ENST00000480447 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
NOP56-212ENST00000480447 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
NOP56-212ENST00000480447 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
NOP56-212ENST00000480447 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
NOP56-212ENST00000480447 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
NOP56-212ENST00000480447 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
NOP56-212ENST00000480447 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
NOP56-212ENST00000480447 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
NOP56-212ENST00000480447 MSH5O43196 834 aa12.19□□□□□ -0.46
NOP56-212ENST00000480447 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
NOP56-212ENST00000480447 DNAJC5Q9H3Z4 198 aa12.16□□□□□ -0.46
NOP56-212ENST00000480447 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
NOP56-212ENST00000480447 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
NOP56-212ENST00000480447 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
NOP56-212ENST00000480447 CUX2O14529 1486 aa12.1□□□□□ -0.47
NOP56-212ENST00000480447 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
NOP56-212ENST00000480447 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
NOP56-212ENST00000480447 HMGXB3Q12766 1538 aa12.07□□□□□ -0.48
NOP56-212ENST00000480447 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
NOP56-212ENST00000480447 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
NOP56-212ENST00000480447 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
NOP56-212ENST00000480447 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
NOP56-212ENST00000480447 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
NOP56-212ENST00000480447 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
NOP56-212ENST00000480447 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
NOP56-212ENST00000480447 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
NOP56-212ENST00000480447 NESP48681 1621 aa11.88□□□□□ -0.51
NOP56-212ENST00000480447 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
NOP56-212ENST00000480447 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
NOP56-212ENST00000480447 THOC2Q8NI27 1593 aaKnown RBP11.77□□□□□ -0.53
NOP56-212ENST00000480447 ZBTB22O15209 634 aa11.76□□□□□ -0.53
NOP56-212ENST00000480447 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
NOP56-212ENST00000480447 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
NOP56-212ENST00000480447 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
NOP56-212ENST00000480447 WDR62O43379 1518 aa11.68□□□□□ -0.54
NOP56-212ENST00000480447 CFTRP13569 1480 aa11.68□□□□□ -0.54
NOP56-212ENST00000480447 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
NOP56-212ENST00000480447 WIZO95785 1651 aa11.67□□□□□ -0.54
NOP56-212ENST00000480447 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
NOP56-212ENST00000480447 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
NOP56-212ENST00000480447 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
NOP56-212ENST00000480447 FOXD4L1Q9NU39 408 aa11.63□□□□□ -0.55
NOP56-212ENST00000480447 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
NOP56-212ENST00000480447 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
NOP56-212ENST00000480447 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
NOP56-212ENST00000480447 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
NOP56-212ENST00000480447 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
NOP56-212ENST00000480447 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
NOP56-212ENST00000480447 CCDC88BA6NC98 1476 aa11.49□□□□□ -0.57
NOP56-212ENST00000480447 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
NOP56-212ENST00000480447 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
NOP56-212ENST00000480447 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
NOP56-212ENST00000480447 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
NOP56-212ENST00000480447 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
NOP56-212ENST00000480447 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
NOP56-212ENST00000480447 SOGA1O94964 1423 aa11.3□□□□□ -0.6
NOP56-212ENST00000480447 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.67e-16■■■□□ 17.5
NOP56-212ENST00000480447 FBLN2P98095 1184 aa11.29□□□□□ -0.6
NOP56-212ENST00000480447 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
NOP56-212ENST00000480447 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
NOP56-212ENST00000480447 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
NOP56-212ENST00000480447 WDR97A6NE52 1622 aa11.27□□□□□ -0.6
NOP56-212ENST00000480447 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.6
NOP56-212ENST00000480447 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
NOP56-212ENST00000480447 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
NOP56-212ENST00000480447 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
NOP56-212ENST00000480447 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
NOP56-212ENST00000480447 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
NOP56-212ENST00000480447 MYCNP04198 464 aaPredicted RBP11.24□□□□□ -0.61
NOP56-212ENST00000480447 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
NOP56-212ENST00000480447 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
NOP56-212ENST00000480447 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
NOP56-212ENST00000480447 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
NOP56-212ENST00000480447 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
NOP56-212ENST00000480447 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms