RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 NISCHQ9Y2I1 1504 aa38.53■■■■□ 3.76
HMGB2-203ENST00000446922 CCDC180Q9P1Z9 1646 aa34.47■■■■□ 3.11
HMGB2-203ENST00000446922 ABCC9O60706 1549 aa34.07■■■■□ 3.04
HMGB2-203ENST00000446922 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
HMGB2-203ENST00000446922 NACADO15069 1562 aa32.56■■■□□ 2.8
HMGB2-203ENST00000446922 DCAF8L2P0C7V8 631 aa32.32■■■□□ 2.76
HMGB2-203ENST00000446922 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
HMGB2-203ENST00000446922 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
HMGB2-203ENST00000446922 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
HMGB2-203ENST00000446922 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
HMGB2-203ENST00000446922 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
HMGB2-203ENST00000446922 DNAJC5BQ9UF47 199 aa31.74■■■□□ 2.67
HMGB2-203ENST00000446922 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.66
HMGB2-203ENST00000446922 SHROOM4Q9ULL8 1493 aa31.43■■■□□ 2.62
HMGB2-203ENST00000446922 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
HMGB2-203ENST00000446922 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
HMGB2-203ENST00000446922 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
HMGB2-203ENST00000446922 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
HMGB2-203ENST00000446922 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
HMGB2-203ENST00000446922 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
HMGB2-203ENST00000446922 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
HMGB2-203ENST00000446922 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
HMGB2-203ENST00000446922 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
HMGB2-203ENST00000446922 HMGXB3Q12766 1538 aa29.83■■■□□ 2.37
HMGB2-203ENST00000446922 PEG3Q9GZU2 1588 aa29.74■■■□□ 2.35
HMGB2-203ENST00000446922 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
HMGB2-203ENST00000446922 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
HMGB2-203ENST00000446922 ERCC6Q03468 1493 aa29.45■■■□□ 2.31
HMGB2-203ENST00000446922 CUX2O14529 1486 aa29.39■■■□□ 2.3
HMGB2-203ENST00000446922 NESP48681 1621 aa29.33■■■□□ 2.29
HMGB2-203ENST00000446922 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
HMGB2-203ENST00000446922 WIZO95785 1651 aa29.25■■■□□ 2.27
HMGB2-203ENST00000446922 PDS5BQ9NTI5 1447 aa29.17■■■□□ 2.26
HMGB2-203ENST00000446922 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
HMGB2-203ENST00000446922 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
HMGB2-203ENST00000446922 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
HMGB2-203ENST00000446922 THOC2Q8NI27 1593 aaKnown RBP29.02■■■□□ 2.24
HMGB2-203ENST00000446922 TOP2AP11388 1531 aaKnown RBP28.97■■■□□ 2.23
HMGB2-203ENST00000446922 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
HMGB2-203ENST00000446922 CFTRP13569 1480 aa28.86■■■□□ 2.21
HMGB2-203ENST00000446922 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
HMGB2-203ENST00000446922 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
HMGB2-203ENST00000446922 FANCD2Q9BXW9 1451 aa28.75■■■□□ 2.19
HMGB2-203ENST00000446922 WDR62O43379 1518 aa28.74■■■□□ 2.19
HMGB2-203ENST00000446922 CCDC88BA6NC98 1476 aa28.64■■■□□ 2.17
HMGB2-203ENST00000446922 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
HMGB2-203ENST00000446922 URB2Q14146 1524 aaKnown RBP28.47■■■□□ 2.15
HMGB2-203ENST00000446922 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
HMGB2-203ENST00000446922 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
HMGB2-203ENST00000446922 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
HMGB2-203ENST00000446922 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
HMGB2-203ENST00000446922 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
HMGB2-203ENST00000446922 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
HMGB2-203ENST00000446922 ZNF608Q9ULD9 1512 aaPredicted RBP28.03■■■□□ 2.08
HMGB2-203ENST00000446922 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
HMGB2-203ENST00000446922 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
HMGB2-203ENST00000446922 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.07
HMGB2-203ENST00000446922 EIF4G3O43432 1585 aaKnown RBP27.9■■■□□ 2.06
HMGB2-203ENST00000446922 SOGA1O94964 1423 aa27.89■■■□□ 2.06
HMGB2-203ENST00000446922 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.059e-20■■■■□ 25.7
HMGB2-203ENST00000446922 CUX1P39880 1505 aa27.82■■■□□ 2.04
HMGB2-203ENST00000446922 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
HMGB2-203ENST00000446922 FGD5Q6ZNL6 1462 aa27.8■■■□□ 2.04
HMGB2-203ENST00000446922 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
HMGB2-203ENST00000446922 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
HMGB2-203ENST00000446922 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
HMGB2-203ENST00000446922 FBLN2P98095 1184 aa27.62■■■□□ 2.01
HMGB2-203ENST00000446922 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
HMGB2-203ENST00000446922 CHD1O14646 1710 aa27.61■■■□□ 2.01
HMGB2-203ENST00000446922 MAGI1Q96QZ7 1491 aaPredicted RBP27.6■■■□□ 2.01
HMGB2-203ENST00000446922 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
HMGB2-203ENST00000446922 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
HMGB2-203ENST00000446922 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
HMGB2-203ENST00000446922 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
HMGB2-203ENST00000446922 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
HMGB2-203ENST00000446922 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
HMGB2-203ENST00000446922 ARHGEF11O15085 1522 aa27.56■■■□□ 2
HMGB2-203ENST00000446922 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 29e-9■■■□□ 16.7
HMGB2-203ENST00000446922 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
HMGB2-203ENST00000446922 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
HMGB2-203ENST00000446922 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
HMGB2-203ENST00000446922 SYNJ2O15056 1496 aa27.49■■□□□ 1.99
HMGB2-203ENST00000446922 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
HMGB2-203ENST00000446922 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
HMGB2-203ENST00000446922 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
HMGB2-203ENST00000446922 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
HMGB2-203ENST00000446922 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
HMGB2-203ENST00000446922 CYB5RLQ6IPT4 315 aa27.35■■□□□ 1.97
HMGB2-203ENST00000446922 ARAP1Q96P48 1450 aa27.29■■□□□ 1.96
HMGB2-203ENST00000446922 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
HMGB2-203ENST00000446922 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
HMGB2-203ENST00000446922 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
HMGB2-203ENST00000446922 ADAMTS12P58397 1594 aa27.2■■□□□ 1.94
HMGB2-203ENST00000446922 NUP160Q12769 1436 aa27.15■■□□□ 1.94
HMGB2-203ENST00000446922 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
HMGB2-203ENST00000446922 KIF27Q86VH2 1401 aa27■■□□□ 1.91
HMGB2-203ENST00000446922 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
HMGB2-203ENST00000446922 IGF1RP08069 1367 aa26.97■■□□□ 1.91
HMGB2-203ENST00000446922 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
HMGB2-203ENST00000446922 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms