RNA–Protein interactions for RNA: ENST00000526033.5

PICALM-204, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PICALM, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-204ENST00000526033 NISCHQ9Y2I1 1504 aa30.14■■■□□ 2.42
PICALM-204ENST00000526033 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
PICALM-204ENST00000526033 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
PICALM-204ENST00000526033 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
PICALM-204ENST00000526033 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
PICALM-204ENST00000526033 PPARGC1BQ86YN6 1023 aaKnown RBP26.53■■□□□ 1.84
PICALM-204ENST00000526033 HRCP23327 699 aa26.41■■□□□ 1.82
PICALM-204ENST00000526033 EHMT2Q96KQ7 1210 aa26.29■■□□□ 1.8
PICALM-204ENST00000526033 LOC105371045A0A1W2PR82 267 aa25.82■■□□□ 1.72
PICALM-204ENST00000526033 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
PICALM-204ENST00000526033 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
PICALM-204ENST00000526033 CCDC180Q9P1Z9 1646 aa25.51■■□□□ 1.67
PICALM-204ENST00000526033 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
PICALM-204ENST00000526033 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
PICALM-204ENST00000526033 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
PICALM-204ENST00000526033 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
PICALM-204ENST00000526033 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
PICALM-204ENST00000526033 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
PICALM-204ENST00000526033 YTHDC1Q96MU7 727 aaKnown RBP25.12■■□□□ 1.61
PICALM-204ENST00000526033 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
PICALM-204ENST00000526033 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
PICALM-204ENST00000526033 TRIM41Q8WV44 630 aa25■■□□□ 1.59
PICALM-204ENST00000526033 CENPBP07199 599 aaPredicted RBP24.94■■□□□ 1.58
PICALM-204ENST00000526033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.9■■□□□ 1.58
PICALM-204ENST00000526033 GTF3C3Q9Y5Q9 886 aa24.82■■□□□ 1.56
PICALM-204ENST00000526033 ABCC9O60706 1549 aa24.69■■□□□ 1.54
PICALM-204ENST00000526033 NEUROD1Q13562 356 aa24.62■■□□□ 1.53
PICALM-204ENST00000526033 DIEXFQ68CQ4 756 aaKnown RBP24.6■■□□□ 1.53
PICALM-204ENST00000526033 ACIN1Q9UKV3 1341 aaKnown RBP24.58■■□□□ 1.53
PICALM-204ENST00000526033 MYT1Q01538 1121 aa24.46■■□□□ 1.51
PICALM-204ENST00000526033 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
PICALM-204ENST00000526033 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
PICALM-204ENST00000526033 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
PICALM-204ENST00000526033 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
PICALM-204ENST00000526033 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
PICALM-204ENST00000526033 APLP2Q06481 763 aa24.03■■□□□ 1.44
PICALM-204ENST00000526033 BCANQ96GW7 911 aa23.91■■□□□ 1.42
PICALM-204ENST00000526033 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
PICALM-204ENST00000526033 NACADO15069 1562 aa23.84■■□□□ 1.41
PICALM-204ENST00000526033 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
PICALM-204ENST00000526033 MIER1Q8N108 512 aa23.82■■□□□ 1.4
PICALM-204ENST00000526033 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
PICALM-204ENST00000526033 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.393e-11■■□□□ 11.9
PICALM-204ENST00000526033 ITGAEP38570 1179 aa23.71■■□□□ 1.39
PICALM-204ENST00000526033 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.37
PICALM-204ENST00000526033 ERICH6Q7L0X2 663 aa23.61■■□□□ 1.37
PICALM-204ENST00000526033 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
PICALM-204ENST00000526033 NEFLP07196 543 aa23.53■■□□□ 1.36
PICALM-204ENST00000526033 WIZO95785 1651 aa23.39■■□□□ 1.33
PICALM-204ENST00000526033 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
PICALM-204ENST00000526033 FKBP8Q14318 412 aa23.27■■□□□ 1.32
PICALM-204ENST00000526033 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
PICALM-204ENST00000526033 UNC13AQ9UPW8 1703 aa23.2■■□□□ 1.3
PICALM-204ENST00000526033 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.3
PICALM-204ENST00000526033 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
PICALM-204ENST00000526033 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
PICALM-204ENST00000526033 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
PICALM-204ENST00000526033 ANP32EQ9BTT0 268 aa23.14■■□□□ 1.29
PICALM-204ENST00000526033 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
PICALM-204ENST00000526033 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
PICALM-204ENST00000526033 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
PICALM-204ENST00000526033 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
PICALM-204ENST00000526033 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
PICALM-204ENST00000526033 BICRAQ9NZM4 1560 aa23■■□□□ 1.27
PICALM-204ENST00000526033 TSHZ2Q9NRE2 1034 aa23■■□□□ 1.27
PICALM-204ENST00000526033 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
PICALM-204ENST00000526033 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
PICALM-204ENST00000526033 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
PICALM-204ENST00000526033 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
PICALM-204ENST00000526033 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
PICALM-204ENST00000526033 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
PICALM-204ENST00000526033 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
PICALM-204ENST00000526033 ANP32CO43423 234 aa22.79■■□□□ 1.24
PICALM-204ENST00000526033 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
PICALM-204ENST00000526033 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
PICALM-204ENST00000526033 NBR1Q14596 966 aa22.75■■□□□ 1.23
PICALM-204ENST00000526033 SOGA1O94964 1423 aa22.73■■□□□ 1.23
PICALM-204ENST00000526033 PRKCSHP14314 528 aaPredicted RBP22.73■■□□□ 1.23
PICALM-204ENST00000526033 RBM19Q9Y4C8 960 aaKnown RBP22.71■■□□□ 1.23
PICALM-204ENST00000526033 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
PICALM-204ENST00000526033 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
PICALM-204ENST00000526033 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
PICALM-204ENST00000526033 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
PICALM-204ENST00000526033 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
PICALM-204ENST00000526033 P3H3Q8IVL6 736 aa22.61■■□□□ 1.21
PICALM-204ENST00000526033 CLIP1P30622 1438 aa22.58■■□□□ 1.21
PICALM-204ENST00000526033 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
PICALM-204ENST00000526033 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
PICALM-204ENST00000526033 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
PICALM-204ENST00000526033 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
PICALM-204ENST00000526033 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
PICALM-204ENST00000526033 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
PICALM-204ENST00000526033 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
PICALM-204ENST00000526033 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.189e-8■□□□□ 8.4
PICALM-204ENST00000526033 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
PICALM-204ENST00000526033 RTN4Q9NQC3 1192 aaKnown RBP22.41■■□□□ 1.18
PICALM-204ENST00000526033 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
PICALM-204ENST00000526033 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
PICALM-204ENST00000526033 B4GALNT3Q6L9W6 998 aa22.34■■□□□ 1.17
PICALM-204ENST00000526033 DEKP35659 375 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms