RNA–Protein interactions for RNA: ENST00000395308.5

KTN1-202, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KTN1, Length 4,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-202ENST00000395308 NISCHQ9Y2I1 1504 aa9.68□□□□□ -0.86
KTN1-202ENST00000395308 HRCP23327 699 aa8.95□□□□□ -0.98
KTN1-202ENST00000395308 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
KTN1-202ENST00000395308 PCGF6Q9BYE7 350 aa8.78□□□□□ -1
KTN1-202ENST00000395308 SUPT5HO00267 1087 aaKnown RBP8.77□□□□□ -1.01
KTN1-202ENST00000395308 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
KTN1-202ENST00000395308 SHROOM4Q9ULL8 1493 aa8.73□□□□□ -1.01
KTN1-202ENST00000395308 CHIC1Q5VXU3 224 aa8.57□□□□□ -1.04
KTN1-202ENST00000395308 MYT1Q01538 1121 aa8.56□□□□□ -1.04
KTN1-202ENST00000395308 MYO15BQ96JP2 1530 aa8.55□□□□□ -1.04
KTN1-202ENST00000395308 ZEB1P37275 1124 aaPredicted RBP8.49□□□□□ -1.05
KTN1-202ENST00000395308 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
KTN1-202ENST00000395308 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
KTN1-202ENST00000395308 DCAF1Q9Y4B6 1507 aa8.46□□□□□ -1.05
KTN1-202ENST00000395308 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
KTN1-202ENST00000395308 CCDC180Q9P1Z9 1646 aa8.36□□□□□ -1.07
KTN1-202ENST00000395308 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
KTN1-202ENST00000395308 CENPBP07199 599 aaPredicted RBP8.3□□□□□ -1.08
KTN1-202ENST00000395308 DCAF8L2P0C7V8 631 aa8.27□□□□□ -1.09
KTN1-202ENST00000395308 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
KTN1-202ENST00000395308 NEUROD1Q13562 356 aa8.24□□□□□ -1.09
KTN1-202ENST00000395308 ZCCHC6Q5VYS8 1495 aaKnown RBP8.23□□□□□ -1.09
KTN1-202ENST00000395308 DIEXFQ68CQ4 756 aaKnown RBP8.16□□□□□ -1.1
KTN1-202ENST00000395308 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
KTN1-202ENST00000395308 FAM9AQ8IZU1 332 aaPredicted RBP8.13□□□□□ -1.11
KTN1-202ENST00000395308 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
KTN1-202ENST00000395308 EHMT2Q96KQ7 1210 aa8.11□□□□□ -1.11
KTN1-202ENST00000395308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.1□□□□□ -1.11
KTN1-202ENST00000395308 YTHDC1Q96MU7 727 aaKnown RBP8.07□□□□□ -1.12
KTN1-202ENST00000395308 TTBK1Q5TCY1 1321 aaPredicted RBP8.01□□□□□ -1.13
KTN1-202ENST00000395308 ZNF316A6NFI3 1004 aaPredicted RBP7.98□□□□□ -1.13
KTN1-202ENST00000395308 MIER1Q8N108 512 aa7.9□□□□□ -1.15
KTN1-202ENST00000395308 BCL11AQ9H165 835 aa7.89□□□□□ -1.15
KTN1-202ENST00000395308 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
KTN1-202ENST00000395308 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
KTN1-202ENST00000395308 ABCC9O60706 1549 aa7.83□□□□□ -1.16
KTN1-202ENST00000395308 RSF1Q96T23 1441 aaPredicted RBP7.83□□□□□ -1.16
KTN1-202ENST00000395308 SUPT16HQ9Y5B9 1047 aaKnown RBP7.81□□□□□ -1.16
KTN1-202ENST00000395308 RB1CC1Q8TDY2 1594 aa7.79□□□□□ -1.16
KTN1-202ENST00000395308 TSHZ2Q9NRE2 1034 aa7.78□□□□□ -1.16
KTN1-202ENST00000395308 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
KTN1-202ENST00000395308 CSRNP3Q8WYN3 585 aa7.76□□□□□ -1.17
KTN1-202ENST00000395308 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
KTN1-202ENST00000395308 UBTFP17480 764 aaKnown RBP7.72□□□□□ -1.17
KTN1-202ENST00000395308 CEP162Q5TB80 1403 aa7.71□□□□□ -1.18
KTN1-202ENST00000395308 BCANQ96GW7 911 aa7.7□□□□□ -1.18
KTN1-202ENST00000395308 APLP2Q06481 763 aa7.69□□□□□ -1.18
KTN1-202ENST00000395308 SCRIBQ14160 1630 aa7.69□□□□□ -1.18
KTN1-202ENST00000395308 NEFLP07196 543 aa7.68□□□□□ -1.18
KTN1-202ENST00000395308 ERICH6Q7L0X2 663 aa7.67□□□□□ -1.18
KTN1-202ENST00000395308 TNIKQ9UKE5 1360 aa7.65□□□□□ -1.18
KTN1-202ENST00000395308 FKBP8Q14318 412 aa7.65□□□□□ -1.18
KTN1-202ENST00000395308 RBM19Q9Y4C8 960 aaKnown RBP7.63□□□□□ -1.19
KTN1-202ENST00000395308 EEA1Q15075 1411 aa7.57□□□□□ -1.2
KTN1-202ENST00000395308 CECR2Q9BXF3 1484 aa7.57□□□□□ -1.2
KTN1-202ENST00000395308 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
KTN1-202ENST00000395308 PRKCSHP14314 528 aaPredicted RBP7.56□□□□□ -1.2
KTN1-202ENST00000395308 MROH2BQ7Z745 1585 aa7.56□□□□□ -1.2
KTN1-202ENST00000395308 GOLGA3Q08378 1498 aa7.56□□□□□ -1.2
KTN1-202ENST00000395308 SOGA1O94964 1423 aa7.56□□□□□ -1.2
KTN1-202ENST00000395308 ITGAEP38570 1179 aa7.55□□□□□ -1.2
KTN1-202ENST00000395308 MYT1LQ9UL68 1186 aa7.55□□□□□ -1.2
KTN1-202ENST00000395308 RANGAP1P46060 587 aaPredicted RBP7.54□□□□□ -1.2
KTN1-202ENST00000395308 ABCC8Q09428 1581 aa7.54□□□□□ -1.2
KTN1-202ENST00000395308 WIZO95785 1651 aa7.54□□□□□ -1.2
KTN1-202ENST00000395308 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
KTN1-202ENST00000395308 CDK11AQ9UQ88 783 aaPredicted RBP7.53□□□□□ -1.2
KTN1-202ENST00000395308 CLIP1P30622 1438 aa7.52□□□□□ -1.21
KTN1-202ENST00000395308 DHX57Q6P158 1386 aaKnown RBP7.51□□□□□ -1.21
KTN1-202ENST00000395308 DDX10Q13206 875 aaKnown RBP7.5□□□□□ -1.21
KTN1-202ENST00000395308 TRIM52Q96A61 297 aa7.5□□□□□ -1.21
KTN1-202ENST00000395308 MSH5O43196 834 aa7.49□□□□□ -1.21
KTN1-202ENST00000395308 VPS8Q8N3P4 1428 aa7.49□□□□□ -1.21
KTN1-202ENST00000395308 BAZ1AQ9NRL2 1556 aaPredicted RBP7.49□□□□□ -1.21
KTN1-202ENST00000395308 FANCIQ9NVI1 1328 aa7.49□□□□□ -1.21
KTN1-202ENST00000395308 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
KTN1-202ENST00000395308 ANP32CO43423 234 aa7.48□□□□□ -1.21
KTN1-202ENST00000395308 DEKP35659 375 aaKnown RBP7.48□□□□□ -1.21
KTN1-202ENST00000395308 CEP164Q9UPV0 1460 aa7.47□□□□□ -1.21
KTN1-202ENST00000395308 EIF4G1Q04637 1599 aaKnown RBP7.47□□□□□ -1.21
KTN1-202ENST00000395308 AEBP2Q6ZN18 517 aaPredicted RBP7.44□□□□□ -1.22
KTN1-202ENST00000395308 CCER2I3L3R5 266 aa7.43□□□□□ -1.22
KTN1-202ENST00000395308 IRX6P78412 446 aaPredicted RBP7.42□□□□□ -1.22
KTN1-202ENST00000395308 NBR1Q14596 966 aa7.41□□□□□ -1.22
KTN1-202ENST00000395308 RTL5Q5HYW3 569 aaPredicted RBP7.41□□□□□ -1.22
KTN1-202ENST00000395308 TOP2AP11388 1531 aaKnown RBP7.41□□□□□ -1.22
KTN1-202ENST00000395308 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
KTN1-202ENST00000395308 KIF21BO75037 1637 aa7.38□□□□□ -1.23
KTN1-202ENST00000395308 NACADO15069 1562 aa7.38□□□□□ -1.23
KTN1-202ENST00000395308 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
KTN1-202ENST00000395308 HIRIP3Q9BW71 556 aaPredicted RBP7.38□□□□□ -1.23
KTN1-202ENST00000395308 NOP58Q9Y2X3 529 aaKnown RBP7.38□□□□□ -1.23
KTN1-202ENST00000395308 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
KTN1-202ENST00000395308 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
KTN1-202ENST00000395308 SMARCA2P51531 1590 aa7.37□□□□□ -1.23
KTN1-202ENST00000395308 PPP4R2Q9NY27 417 aa7.37□□□□□ -1.23
KTN1-202ENST00000395308 PPP1R15AO75807 674 aaPredicted RBP7.36□□□□□ -1.23
KTN1-202ENST00000395308 KANK4Q5T7N3 995 aaPredicted RBP7.36□□□□□ -1.23
KTN1-202ENST00000395308 CCNB3Q8WWL7 1395 aa7.35□□□□□ -1.23
KTN1-202ENST00000395308 RAPGEF2Q9Y4G8 1499 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms