RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.4
RRP1-201ENST00000467112 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
RRP1-201ENST00000467112 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
RRP1-201ENST00000467112 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
RRP1-201ENST00000467112 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
RRP1-201ENST00000467112 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
RRP1-201ENST00000467112 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
RRP1-201ENST00000467112 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
RRP1-201ENST00000467112 HRCP23327 699 aa24.86■■□□□ 1.57
RRP1-201ENST00000467112 PCGF6Q9BYE7 350 aa24.7■■□□□ 1.54
RRP1-201ENST00000467112 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
RRP1-201ENST00000467112 LOC105371045A0A1W2PR82 267 aa24.43■■□□□ 1.5
RRP1-201ENST00000467112 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
RRP1-201ENST00000467112 TRIM26Q12899 539 aaPredicted RBP24.05■■□□□ 1.44
RRP1-201ENST00000467112 ABCC9O60706 1549 aa24.05■■□□□ 1.44
RRP1-201ENST00000467112 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
RRP1-201ENST00000467112 NACADO15069 1562 aa23.93■■□□□ 1.42
RRP1-201ENST00000467112 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
RRP1-201ENST00000467112 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
RRP1-201ENST00000467112 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
RRP1-201ENST00000467112 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
RRP1-201ENST00000467112 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
RRP1-201ENST00000467112 ZEB1P37275 1124 aaPredicted RBP23.62■■□□□ 1.37
RRP1-201ENST00000467112 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
RRP1-201ENST00000467112 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
RRP1-201ENST00000467112 WIZO95785 1651 aa23.29■■□□□ 1.32
RRP1-201ENST00000467112 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
RRP1-201ENST00000467112 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
RRP1-201ENST00000467112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.12■■□□□ 1.29
RRP1-201ENST00000467112 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
RRP1-201ENST00000467112 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
RRP1-201ENST00000467112 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
RRP1-201ENST00000467112 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
RRP1-201ENST00000467112 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
RRP1-201ENST00000467112 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
RRP1-201ENST00000467112 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
RRP1-201ENST00000467112 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
RRP1-201ENST00000467112 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
RRP1-201ENST00000467112 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
RRP1-201ENST00000467112 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
RRP1-201ENST00000467112 SOGA1O94964 1423 aa22.8■■□□□ 1.24
RRP1-201ENST00000467112 ACIN1Q9UKV3 1341 aaKnown RBP22.78■■□□□ 1.24
RRP1-201ENST00000467112 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
RRP1-201ENST00000467112 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
RRP1-201ENST00000467112 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
RRP1-201ENST00000467112 DIEXFQ68CQ4 756 aaKnown RBP22.76■■□□□ 1.23
RRP1-201ENST00000467112 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
RRP1-201ENST00000467112 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
RRP1-201ENST00000467112 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
RRP1-201ENST00000467112 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
RRP1-201ENST00000467112 EEA1Q15075 1411 aa22.6■■□□□ 1.21
RRP1-201ENST00000467112 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
RRP1-201ENST00000467112 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
RRP1-201ENST00000467112 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
RRP1-201ENST00000467112 ZNF316A6NFI3 1004 aaPredicted RBP22.48■■□□□ 1.19
RRP1-201ENST00000467112 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.195e-7■■■□□ 15.8
RRP1-201ENST00000467112 HNRNPUL2Q1KMD3 747 aaKnown RBP22.41■■□□□ 1.18
RRP1-201ENST00000467112 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
RRP1-201ENST00000467112 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
RRP1-201ENST00000467112 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
RRP1-201ENST00000467112 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.16
RRP1-201ENST00000467112 CLIP1P30622 1438 aa22.33■■□□□ 1.16
RRP1-201ENST00000467112 KIF21BO75037 1637 aa22.28■■□□□ 1.16
RRP1-201ENST00000467112 MIER1Q8N108 512 aa22.26■■□□□ 1.15
RRP1-201ENST00000467112 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
RRP1-201ENST00000467112 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
RRP1-201ENST00000467112 APLP2Q06481 763 aa22.21■■□□□ 1.15
RRP1-201ENST00000467112 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
RRP1-201ENST00000467112 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
RRP1-201ENST00000467112 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
RRP1-201ENST00000467112 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
RRP1-201ENST00000467112 NCAPD3P42695 1498 aa22■■□□□ 1.11
RRP1-201ENST00000467112 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
RRP1-201ENST00000467112 DHX57Q6P158 1386 aaKnown RBP21.94■■□□□ 1.1
RRP1-201ENST00000467112 KANK4Q5T7N3 995 aaPredicted RBP21.93■■□□□ 1.1
RRP1-201ENST00000467112 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
RRP1-201ENST00000467112 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
RRP1-201ENST00000467112 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
RRP1-201ENST00000467112 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
RRP1-201ENST00000467112 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
RRP1-201ENST00000467112 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
RRP1-201ENST00000467112 MYT1Q01538 1121 aa21.79■■□□□ 1.08
RRP1-201ENST00000467112 RRBP1Q9P2E9 1410 aaKnown RBP21.76■■□□□ 1.07
RRP1-201ENST00000467112 CUX1P39880 1505 aa21.75■■□□□ 1.07
RRP1-201ENST00000467112 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
RRP1-201ENST00000467112 ITGAEP38570 1179 aa21.72■■□□□ 1.07
RRP1-201ENST00000467112 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
RRP1-201ENST00000467112 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
RRP1-201ENST00000467112 CUX2O14529 1486 aa21.65■■□□□ 1.06
RRP1-201ENST00000467112 SUPT16HQ9Y5B9 1047 aaKnown RBP21.64■■□□□ 1.06
RRP1-201ENST00000467112 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
RRP1-201ENST00000467112 RAB3GAP2Q9H2M9 1393 aa21.57■■□□□ 1.04
RRP1-201ENST00000467112 CFTRP13569 1480 aa21.56■■□□□ 1.04
RRP1-201ENST00000467112 KCNH8Q96L42 1107 aa21.53■■□□□ 1.04
RRP1-201ENST00000467112 MAPKBP1O60336 1514 aa21.5■■□□□ 1.03
RRP1-201ENST00000467112 IGF1RP08069 1367 aa21.5■■□□□ 1.03
RRP1-201ENST00000467112 TIAM1Q13009 1591 aa21.45■■□□□ 1.03
RRP1-201ENST00000467112 SETD5Q9C0A6 1442 aa21.43■■□□□ 1.02
RRP1-201ENST00000467112 PHLDB1Q86UU1 1377 aa21.42■■□□□ 1.02
RRP1-201ENST00000467112 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms