RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
DNMT1-228ENST00000592705 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
DNMT1-228ENST00000592705 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
DNMT1-228ENST00000592705 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
DNMT1-228ENST00000592705 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
DNMT1-228ENST00000592705 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
DNMT1-228ENST00000592705 APLP2Q06481 763 aa19.9■□□□□ 0.78
DNMT1-228ENST00000592705 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
DNMT1-228ENST00000592705 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
DNMT1-228ENST00000592705 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
DNMT1-228ENST00000592705 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
DNMT1-228ENST00000592705 ATP1B4Q9UN42 357 aaPredicted RBP19.48■□□□□ 0.71
DNMT1-228ENST00000592705 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-228ENST00000592705 ABCC9O60706 1549 aa19.38■□□□□ 0.69
DNMT1-228ENST00000592705 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.69
DNMT1-228ENST00000592705 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.68
DNMT1-228ENST00000592705 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
DNMT1-228ENST00000592705 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
DNMT1-228ENST00000592705 HRCP23327 699 aa19.19■□□□□ 0.66
DNMT1-228ENST00000592705 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
DNMT1-228ENST00000592705 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
DNMT1-228ENST00000592705 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
DNMT1-228ENST00000592705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
DNMT1-228ENST00000592705 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
DNMT1-228ENST00000592705 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
DNMT1-228ENST00000592705 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
DNMT1-228ENST00000592705 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
DNMT1-228ENST00000592705 MYT1Q01538 1121 aa18.8■□□□□ 0.6
DNMT1-228ENST00000592705 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
DNMT1-228ENST00000592705 FBLN2P98095 1184 aa18.76■□□□□ 0.59
DNMT1-228ENST00000592705 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
DNMT1-228ENST00000592705 NEFLP07196 543 aa18.68■□□□□ 0.58
DNMT1-228ENST00000592705 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
DNMT1-228ENST00000592705 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
DNMT1-228ENST00000592705 ITGAEP38570 1179 aa18.37■□□□□ 0.53
DNMT1-228ENST00000592705 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.52
DNMT1-228ENST00000592705 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
DNMT1-228ENST00000592705 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
DNMT1-228ENST00000592705 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
DNMT1-228ENST00000592705 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
DNMT1-228ENST00000592705 BCANQ96GW7 911 aa18.14■□□□□ 0.49
DNMT1-228ENST00000592705 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
DNMT1-228ENST00000592705 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
DNMT1-228ENST00000592705 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
DNMT1-228ENST00000592705 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
DNMT1-228ENST00000592705 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
DNMT1-228ENST00000592705 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
DNMT1-228ENST00000592705 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
DNMT1-228ENST00000592705 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
DNMT1-228ENST00000592705 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
DNMT1-228ENST00000592705 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
DNMT1-228ENST00000592705 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
DNMT1-228ENST00000592705 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
DNMT1-228ENST00000592705 RB1CC1Q8TDY2 1594 aa17.94■□□□□ 0.46
DNMT1-228ENST00000592705 DAXXQ9UER7 740 aaPredicted RBP17.94■□□□□ 0.46
DNMT1-228ENST00000592705 NEUROD1Q13562 356 aa17.89■□□□□ 0.45
DNMT1-228ENST00000592705 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
DNMT1-228ENST00000592705 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
DNMT1-228ENST00000592705 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
DNMT1-228ENST00000592705 ANP32CO43423 234 aa17.84■□□□□ 0.45
DNMT1-228ENST00000592705 CNGB1Q14028 1251 aaPredicted RBP17.82■□□□□ 0.44
DNMT1-228ENST00000592705 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
DNMT1-228ENST00000592705 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-228ENST00000592705 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
DNMT1-228ENST00000592705 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
DNMT1-228ENST00000592705 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
DNMT1-228ENST00000592705 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
DNMT1-228ENST00000592705 CHGAP10645 457 aaKnown RBP17.67■□□□□ 0.42
DNMT1-228ENST00000592705 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-228ENST00000592705 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
DNMT1-228ENST00000592705 NACADO15069 1562 aa17.59■□□□□ 0.41
DNMT1-228ENST00000592705 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.4
DNMT1-228ENST00000592705 NEFMP07197 916 aa17.55■□□□□ 0.4
DNMT1-228ENST00000592705 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
DNMT1-228ENST00000592705 TSPY4P0CV99 314 aa17.5■□□□□ 0.39
DNMT1-228ENST00000592705 TSPY10P0CW01 314 aa17.5■□□□□ 0.39
DNMT1-228ENST00000592705 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
DNMT1-228ENST00000592705 EEA1Q15075 1411 aa17.49■□□□□ 0.39
DNMT1-228ENST00000592705 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
DNMT1-228ENST00000592705 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
DNMT1-228ENST00000592705 CLIP1P30622 1438 aa17.44■□□□□ 0.38
DNMT1-228ENST00000592705 C14orf37Q86TY3 774 aa17.44■□□□□ 0.38
DNMT1-228ENST00000592705 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
DNMT1-228ENST00000592705 FKBP8Q14318 412 aa17.42■□□□□ 0.38
DNMT1-228ENST00000592705 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
DNMT1-228ENST00000592705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■■■■□ 23.2
DNMT1-228ENST00000592705 GOLGA3Q08378 1498 aa17.41■□□□□ 0.38
DNMT1-228ENST00000592705 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.38
DNMT1-228ENST00000592705 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
DNMT1-228ENST00000592705 MIER1Q8N108 512 aa17.38■□□□□ 0.37
DNMT1-228ENST00000592705 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.37
DNMT1-228ENST00000592705 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.37
DNMT1-228ENST00000592705 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
DNMT1-228ENST00000592705 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-228ENST00000592705 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-228ENST00000592705 A0A0G2JS52 829 aa17.29■□□□□ 0.36
DNMT1-228ENST00000592705 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
DNMT1-228ENST00000592705 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
DNMT1-228ENST00000592705 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
DNMT1-228ENST00000592705 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms