RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
RRP1-202ENST00000471909 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
RRP1-202ENST00000471909 ZCCHC6Q5VYS8 1495 aaKnown RBP31.75■■■□□ 2.67
RRP1-202ENST00000471909 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
RRP1-202ENST00000471909 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.57
RRP1-202ENST00000471909 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
RRP1-202ENST00000471909 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.48
RRP1-202ENST00000471909 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
RRP1-202ENST00000471909 ABCC9O60706 1549 aa30.33■■■□□ 2.45
RRP1-202ENST00000471909 SCRIBQ14160 1630 aa30.07■■■□□ 2.41
RRP1-202ENST00000471909 NACADO15069 1562 aa30.07■■■□□ 2.4
RRP1-202ENST00000471909 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
RRP1-202ENST00000471909 RSF1Q96T23 1441 aaPredicted RBP29.53■■■□□ 2.32
RRP1-202ENST00000471909 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
RRP1-202ENST00000471909 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
RRP1-202ENST00000471909 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
RRP1-202ENST00000471909 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
RRP1-202ENST00000471909 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
RRP1-202ENST00000471909 WIZO95785 1651 aa28.97■■■□□ 2.23
RRP1-202ENST00000471909 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
RRP1-202ENST00000471909 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.215e-7■■■□□ 15.8
RRP1-202ENST00000471909 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
RRP1-202ENST00000471909 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
RRP1-202ENST00000471909 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
RRP1-202ENST00000471909 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
RRP1-202ENST00000471909 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
RRP1-202ENST00000471909 EIF4G1Q04637 1599 aaKnown RBP28.4■■■□□ 2.14
RRP1-202ENST00000471909 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
RRP1-202ENST00000471909 PEG3Q9GZU2 1588 aa28.36■■■□□ 2.13
RRP1-202ENST00000471909 HRCP23327 699 aa28.22■■■□□ 2.11
RRP1-202ENST00000471909 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
RRP1-202ENST00000471909 FAM9AQ8IZU1 332 aaPredicted RBP28.18■■■□□ 2.1
RRP1-202ENST00000471909 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
RRP1-202ENST00000471909 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
RRP1-202ENST00000471909 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
RRP1-202ENST00000471909 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
RRP1-202ENST00000471909 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
RRP1-202ENST00000471909 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
RRP1-202ENST00000471909 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
RRP1-202ENST00000471909 SOGA1O94964 1423 aa27.7■■■□□ 2.02
RRP1-202ENST00000471909 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
RRP1-202ENST00000471909 EEA1Q15075 1411 aa27.58■■■□□ 2.01
RRP1-202ENST00000471909 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
RRP1-202ENST00000471909 TRIM26Q12899 539 aaPredicted RBP27.55■■■□□ 2
RRP1-202ENST00000471909 PPARGC1BQ86YN6 1023 aaKnown RBP27.52■■■□□ 2
RRP1-202ENST00000471909 CSRNP3Q8WYN3 585 aa27.51■■■□□ 2
RRP1-202ENST00000471909 CFTRP13569 1480 aa27.4■■□□□ 1.98
RRP1-202ENST00000471909 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
RRP1-202ENST00000471909 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
RRP1-202ENST00000471909 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
RRP1-202ENST00000471909 BIVM-ERCC5R4GMW8 1640 aa27.31■■□□□ 1.96
RRP1-202ENST00000471909 CEP162Q5TB80 1403 aa27.3■■□□□ 1.96
RRP1-202ENST00000471909 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
RRP1-202ENST00000471909 UBTFP17480 764 aaKnown RBP27.26■■□□□ 1.95
RRP1-202ENST00000471909 CUX1P39880 1505 aa27.23■■□□□ 1.95
RRP1-202ENST00000471909 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
RRP1-202ENST00000471909 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
RRP1-202ENST00000471909 KIF21BO75037 1637 aa27.2■■□□□ 1.94
RRP1-202ENST00000471909 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
RRP1-202ENST00000471909 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
RRP1-202ENST00000471909 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
RRP1-202ENST00000471909 PRXQ9BXM0 1461 aa26.96■■□□□ 1.91
RRP1-202ENST00000471909 CLIP1P30622 1438 aa26.93■■□□□ 1.9
RRP1-202ENST00000471909 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
RRP1-202ENST00000471909 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
RRP1-202ENST00000471909 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
RRP1-202ENST00000471909 NESP48681 1621 aa26.85■■□□□ 1.89
RRP1-202ENST00000471909 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
RRP1-202ENST00000471909 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
RRP1-202ENST00000471909 CUX2O14529 1486 aa26.8■■□□□ 1.88
RRP1-202ENST00000471909 RANGAP1P46060 587 aaPredicted RBP26.76■■□□□ 1.87
RRP1-202ENST00000471909 VPS8Q8N3P4 1428 aa26.76■■□□□ 1.87
RRP1-202ENST00000471909 DNAJC5BQ9UF47 199 aa26.76■■□□□ 1.87
RRP1-202ENST00000471909 IGF1RP08069 1367 aa26.73■■□□□ 1.87
RRP1-202ENST00000471909 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
RRP1-202ENST00000471909 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.87
RRP1-202ENST00000471909 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
RRP1-202ENST00000471909 POLA1P09884 1462 aaPredicted RBP26.61■■□□□ 1.85
RRP1-202ENST00000471909 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
RRP1-202ENST00000471909 ARAP1Q96P48 1450 aa26.59■■□□□ 1.85
RRP1-202ENST00000471909 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.85
RRP1-202ENST00000471909 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
RRP1-202ENST00000471909 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
RRP1-202ENST00000471909 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
RRP1-202ENST00000471909 APLP2Q06481 763 aa26.53■■□□□ 1.84
RRP1-202ENST00000471909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.48■■□□□ 1.83
RRP1-202ENST00000471909 PELP1Q8IZL8 1130 aaKnown RBP26.48■■□□□ 1.83
RRP1-202ENST00000471909 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
RRP1-202ENST00000471909 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
RRP1-202ENST00000471909 CCER1Q8TC90 406 aaPredicted RBP26.39■■□□□ 1.82
RRP1-202ENST00000471909 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
RRP1-202ENST00000471909 SCAF1Q9H7N4 1312 aaKnown RBP26.31■■□□□ 1.8
RRP1-202ENST00000471909 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
RRP1-202ENST00000471909 KANK4Q5T7N3 995 aaPredicted RBP26.3■■□□□ 1.8
RRP1-202ENST00000471909 CUL7Q14999 1698 aa26.3■■□□□ 1.8
RRP1-202ENST00000471909 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
RRP1-202ENST00000471909 HNRNPUL2Q1KMD3 747 aaKnown RBP26.24■■□□□ 1.79
RRP1-202ENST00000471909 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
RRP1-202ENST00000471909 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
RRP1-202ENST00000471909 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms