RNA–Protein interactions for RNA: ENST00000528411.1

PICALM-210, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-210ENST00000528411 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
PICALM-210ENST00000528411 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
PICALM-210ENST00000528411 ABCC9O60706 1549 aa32.22■■■□□ 2.75
PICALM-210ENST00000528411 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
PICALM-210ENST00000528411 NACADO15069 1562 aa30.85■■■□□ 2.53
PICALM-210ENST00000528411 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
PICALM-210ENST00000528411 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
PICALM-210ENST00000528411 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
PICALM-210ENST00000528411 DCAF1Q9Y4B6 1507 aa30.38■■■□□ 2.45
PICALM-210ENST00000528411 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
PICALM-210ENST00000528411 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
PICALM-210ENST00000528411 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
PICALM-210ENST00000528411 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
PICALM-210ENST00000528411 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
PICALM-210ENST00000528411 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
PICALM-210ENST00000528411 EIF4G1Q04637 1599 aaKnown RBP29.2■■■□□ 2.26
PICALM-210ENST00000528411 CC2D2AQ9P2K1 1620 aa29.14■■■□□ 2.26
PICALM-210ENST00000528411 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
PICALM-210ENST00000528411 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
PICALM-210ENST00000528411 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
PICALM-210ENST00000528411 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
PICALM-210ENST00000528411 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
PICALM-210ENST00000528411 SMARCA2P51531 1590 aa28.4■■■□□ 2.14
PICALM-210ENST00000528411 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
PICALM-210ENST00000528411 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
PICALM-210ENST00000528411 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
PICALM-210ENST00000528411 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
PICALM-210ENST00000528411 WIZO95785 1651 aa27.96■■■□□ 2.07
PICALM-210ENST00000528411 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
PICALM-210ENST00000528411 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
PICALM-210ENST00000528411 NESP48681 1621 aa27.81■■■□□ 2.04
PICALM-210ENST00000528411 LAMC3Q9Y6N6 1575 aa27.74■■■□□ 2.03
PICALM-210ENST00000528411 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
PICALM-210ENST00000528411 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
PICALM-210ENST00000528411 CUX2O14529 1486 aa27.6■■■□□ 2.01
PICALM-210ENST00000528411 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2.01
PICALM-210ENST00000528411 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
PICALM-210ENST00000528411 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
PICALM-210ENST00000528411 CFTRP13569 1480 aa27.41■■□□□ 1.98
PICALM-210ENST00000528411 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
PICALM-210ENST00000528411 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
PICALM-210ENST00000528411 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
PICALM-210ENST00000528411 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
PICALM-210ENST00000528411 WDR62O43379 1518 aa27.19■■□□□ 1.94
PICALM-210ENST00000528411 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
PICALM-210ENST00000528411 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
PICALM-210ENST00000528411 DNAJC5Q9H3Z4 198 aa27.03■■□□□ 1.92
PICALM-210ENST00000528411 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
PICALM-210ENST00000528411 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
PICALM-210ENST00000528411 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
PICALM-210ENST00000528411 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
PICALM-210ENST00000528411 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
PICALM-210ENST00000528411 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
PICALM-210ENST00000528411 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
PICALM-210ENST00000528411 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
PICALM-210ENST00000528411 CUX1P39880 1505 aa26.54■■□□□ 1.84
PICALM-210ENST00000528411 SOGA1O94964 1423 aa26.5■■□□□ 1.83
PICALM-210ENST00000528411 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
PICALM-210ENST00000528411 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
PICALM-210ENST00000528411 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
PICALM-210ENST00000528411 OSCARQ8IYS5 282 aa26.46■■□□□ 1.83
PICALM-210ENST00000528411 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.821e-8■□□□□ 9.7
PICALM-210ENST00000528411 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
PICALM-210ENST00000528411 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
PICALM-210ENST00000528411 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.89e-8■□□□□ 8.4
PICALM-210ENST00000528411 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
PICALM-210ENST00000528411 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
PICALM-210ENST00000528411 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
PICALM-210ENST00000528411 SYNJ1O43426 1573 aa26.22■■□□□ 1.79
PICALM-210ENST00000528411 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
PICALM-210ENST00000528411 FBLN2P98095 1184 aa26.19■■□□□ 1.78
PICALM-210ENST00000528411 CHD1O14646 1710 aa26.19■■□□□ 1.78
PICALM-210ENST00000528411 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
PICALM-210ENST00000528411 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
PICALM-210ENST00000528411 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
PICALM-210ENST00000528411 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
PICALM-210ENST00000528411 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
PICALM-210ENST00000528411 CHMP7Q8WUX9 453 aaPredicted RBP26.1■■□□□ 1.77
PICALM-210ENST00000528411 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
PICALM-210ENST00000528411 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
PICALM-210ENST00000528411 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
PICALM-210ENST00000528411 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
PICALM-210ENST00000528411 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
PICALM-210ENST00000528411 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
PICALM-210ENST00000528411 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
PICALM-210ENST00000528411 CLASP1Q7Z460 1538 aa25.9■■□□□ 1.74
PICALM-210ENST00000528411 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
PICALM-210ENST00000528411 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
PICALM-210ENST00000528411 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
PICALM-210ENST00000528411 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
PICALM-210ENST00000528411 CYB5RLQ6IPT4 315 aa25.79■■□□□ 1.72
PICALM-210ENST00000528411 NUP160Q12769 1436 aa25.76■■□□□ 1.71
PICALM-210ENST00000528411 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
PICALM-210ENST00000528411 IGF1RP08069 1367 aa25.72■■□□□ 1.71
PICALM-210ENST00000528411 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
PICALM-210ENST00000528411 CUL7Q14999 1698 aa25.64■■□□□ 1.69
PICALM-210ENST00000528411 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
PICALM-210ENST00000528411 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
PICALM-210ENST00000528411 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
PICALM-210ENST00000528411 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms