RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
MACF1-208ENST00000446276 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
MACF1-208ENST00000446276 ABCC9O60706 1549 aa23.43■■□□□ 1.34
MACF1-208ENST00000446276 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
MACF1-208ENST00000446276 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
MACF1-208ENST00000446276 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
MACF1-208ENST00000446276 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
MACF1-208ENST00000446276 NACADO15069 1562 aa22.85■■□□□ 1.25
MACF1-208ENST00000446276 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
MACF1-208ENST00000446276 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
MACF1-208ENST00000446276 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
MACF1-208ENST00000446276 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
MACF1-208ENST00000446276 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
MACF1-208ENST00000446276 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
MACF1-208ENST00000446276 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
MACF1-208ENST00000446276 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
MACF1-208ENST00000446276 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
MACF1-208ENST00000446276 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
MACF1-208ENST00000446276 MROH2BQ7Z745 1585 aa21.38■■□□□ 1.01
MACF1-208ENST00000446276 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
MACF1-208ENST00000446276 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.99
MACF1-208ENST00000446276 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
MACF1-208ENST00000446276 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
MACF1-208ENST00000446276 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
MACF1-208ENST00000446276 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
MACF1-208ENST00000446276 WIZO95785 1651 aa21.14■□□□□ 0.98
MACF1-208ENST00000446276 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
MACF1-208ENST00000446276 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
MACF1-208ENST00000446276 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
MACF1-208ENST00000446276 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.95
MACF1-208ENST00000446276 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
MACF1-208ENST00000446276 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
MACF1-208ENST00000446276 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
MACF1-208ENST00000446276 CFTRP13569 1480 aa20.5■□□□□ 0.87
MACF1-208ENST00000446276 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
MACF1-208ENST00000446276 NESP48681 1621 aa20.42■□□□□ 0.86
MACF1-208ENST00000446276 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
MACF1-208ENST00000446276 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
MACF1-208ENST00000446276 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
MACF1-208ENST00000446276 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
MACF1-208ENST00000446276 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
MACF1-208ENST00000446276 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
MACF1-208ENST00000446276 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
MACF1-208ENST00000446276 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
MACF1-208ENST00000446276 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
MACF1-208ENST00000446276 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
MACF1-208ENST00000446276 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
MACF1-208ENST00000446276 CUX1P39880 1505 aa20.02■□□□□ 0.8
MACF1-208ENST00000446276 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
MACF1-208ENST00000446276 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
MACF1-208ENST00000446276 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
MACF1-208ENST00000446276 THOC2Q8NI27 1593 aaKnown RBP19.99■□□□□ 0.79
MACF1-208ENST00000446276 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
MACF1-208ENST00000446276 WDR62O43379 1518 aa19.97■□□□□ 0.79
MACF1-208ENST00000446276 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
MACF1-208ENST00000446276 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
MACF1-208ENST00000446276 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
MACF1-208ENST00000446276 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
MACF1-208ENST00000446276 CUX2O14529 1486 aa19.8■□□□□ 0.76
MACF1-208ENST00000446276 SOGA1O94964 1423 aa19.79■□□□□ 0.76
MACF1-208ENST00000446276 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.75
MACF1-208ENST00000446276 IFT140Q96RY7 1462 aa19.75■□□□□ 0.75
MACF1-208ENST00000446276 TARBP1Q13395 1621 aaKnown RBP19.72■□□□□ 0.75
MACF1-208ENST00000446276 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
MACF1-208ENST00000446276 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
MACF1-208ENST00000446276 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
MACF1-208ENST00000446276 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
MACF1-208ENST00000446276 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
MACF1-208ENST00000446276 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
MACF1-208ENST00000446276 EEA1Q15075 1411 aa19.59■□□□□ 0.73
MACF1-208ENST00000446276 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.721e-6■■■■□ 20.3
MACF1-208ENST00000446276 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
MACF1-208ENST00000446276 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
MACF1-208ENST00000446276 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
MACF1-208ENST00000446276 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
MACF1-208ENST00000446276 IGF1RP08069 1367 aa19.51■□□□□ 0.71
MACF1-208ENST00000446276 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
MACF1-208ENST00000446276 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
MACF1-208ENST00000446276 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
MACF1-208ENST00000446276 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
MACF1-208ENST00000446276 CARMIL1Q5VZK9 1371 aa19.4■□□□□ 0.7
MACF1-208ENST00000446276 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.7
MACF1-208ENST00000446276 PRXQ9BXM0 1461 aa19.39■□□□□ 0.7
MACF1-208ENST00000446276 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
MACF1-208ENST00000446276 CUL7Q14999 1698 aa19.37■□□□□ 0.69
MACF1-208ENST00000446276 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
MACF1-208ENST00000446276 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
MACF1-208ENST00000446276 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
MACF1-208ENST00000446276 KIF21BO75037 1637 aa19.31■□□□□ 0.68
MACF1-208ENST00000446276 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
MACF1-208ENST00000446276 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
MACF1-208ENST00000446276 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
MACF1-208ENST00000446276 FBLN2P98095 1184 aa19.25■□□□□ 0.67
MACF1-208ENST00000446276 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
MACF1-208ENST00000446276 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
MACF1-208ENST00000446276 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
MACF1-208ENST00000446276 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
MACF1-208ENST00000446276 CHD1O14646 1710 aa19.16■□□□□ 0.66
MACF1-208ENST00000446276 NUP160Q12769 1436 aa19.15■□□□□ 0.66
MACF1-208ENST00000446276 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms