RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
DNMT1-207ENST00000586588 HRCP23327 699 aa22.29■■□□□ 1.16
DNMT1-207ENST00000586588 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
DNMT1-207ENST00000586588 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
DNMT1-207ENST00000586588 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
DNMT1-207ENST00000586588 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
DNMT1-207ENST00000586588 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
DNMT1-207ENST00000586588 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.03
DNMT1-207ENST00000586588 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
DNMT1-207ENST00000586588 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
DNMT1-207ENST00000586588 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
DNMT1-207ENST00000586588 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
DNMT1-207ENST00000586588 MYT1Q01538 1121 aa21.25■□□□□ 0.99
DNMT1-207ENST00000586588 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
DNMT1-207ENST00000586588 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
DNMT1-207ENST00000586588 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
DNMT1-207ENST00000586588 TRIM26Q12899 539 aaPredicted RBP21.01■□□□□ 0.95
DNMT1-207ENST00000586588 ABCC9O60706 1549 aa20.95■□□□□ 0.94
DNMT1-207ENST00000586588 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
DNMT1-207ENST00000586588 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
DNMT1-207ENST00000586588 NACADO15069 1562 aa20.59■□□□□ 0.89
DNMT1-207ENST00000586588 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
DNMT1-207ENST00000586588 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
DNMT1-207ENST00000586588 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
DNMT1-207ENST00000586588 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
DNMT1-207ENST00000586588 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
DNMT1-207ENST00000586588 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
DNMT1-207ENST00000586588 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
DNMT1-207ENST00000586588 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
DNMT1-207ENST00000586588 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
DNMT1-207ENST00000586588 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-207ENST00000586588 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
DNMT1-207ENST00000586588 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
DNMT1-207ENST00000586588 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
DNMT1-207ENST00000586588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
DNMT1-207ENST00000586588 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
DNMT1-207ENST00000586588 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
DNMT1-207ENST00000586588 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
DNMT1-207ENST00000586588 FAM9AQ8IZU1 332 aaPredicted RBP19.72■□□□□ 0.75
DNMT1-207ENST00000586588 WIZO95785 1651 aa19.72■□□□□ 0.75
DNMT1-207ENST00000586588 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
DNMT1-207ENST00000586588 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
DNMT1-207ENST00000586588 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
DNMT1-207ENST00000586588 YTHDC1Q96MU7 727 aaKnown RBP19.6■□□□□ 0.73
DNMT1-207ENST00000586588 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
DNMT1-207ENST00000586588 ANP32EQ9BTT0 268 aa19.55■□□□□ 0.72
DNMT1-207ENST00000586588 MIER1Q8N108 512 aa19.53■□□□□ 0.72
DNMT1-207ENST00000586588 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
DNMT1-207ENST00000586588 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
DNMT1-207ENST00000586588 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
DNMT1-207ENST00000586588 SUPT16HQ9Y5B9 1047 aaKnown RBP19.39■□□□□ 0.69
DNMT1-207ENST00000586588 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
DNMT1-207ENST00000586588 TSHZ2Q9NRE2 1034 aa19.36■□□□□ 0.69
DNMT1-207ENST00000586588 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
DNMT1-207ENST00000586588 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
DNMT1-207ENST00000586588 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
DNMT1-207ENST00000586588 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
DNMT1-207ENST00000586588 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
DNMT1-207ENST00000586588 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
DNMT1-207ENST00000586588 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
DNMT1-207ENST00000586588 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
DNMT1-207ENST00000586588 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
DNMT1-207ENST00000586588 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
DNMT1-207ENST00000586588 ABCC8Q09428 1581 aa19■□□□□ 0.63
DNMT1-207ENST00000586588 EEA1Q15075 1411 aa18.96■□□□□ 0.63
DNMT1-207ENST00000586588 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
DNMT1-207ENST00000586588 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
DNMT1-207ENST00000586588 RBM19Q9Y4C8 960 aaKnown RBP18.88■□□□□ 0.61
DNMT1-207ENST00000586588 PRKCSHP14314 528 aaPredicted RBP18.86■□□□□ 0.61
DNMT1-207ENST00000586588 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
DNMT1-207ENST00000586588 SOGA1O94964 1423 aa18.84■□□□□ 0.61
DNMT1-207ENST00000586588 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
DNMT1-207ENST00000586588 FKBP8Q14318 412 aa18.77■□□□□ 0.6
DNMT1-207ENST00000586588 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.6
DNMT1-207ENST00000586588 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
DNMT1-207ENST00000586588 BCANQ96GW7 911 aa18.75■□□□□ 0.59
DNMT1-207ENST00000586588 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
DNMT1-207ENST00000586588 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
DNMT1-207ENST00000586588 MSH5O43196 834 aa18.7■□□□□ 0.58
DNMT1-207ENST00000586588 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
DNMT1-207ENST00000586588 CFTRP13569 1480 aa18.69■□□□□ 0.58
DNMT1-207ENST00000586588 NEFLP07196 543 aa18.68■□□□□ 0.58
DNMT1-207ENST00000586588 ERICH6Q7L0X2 663 aa18.68■□□□□ 0.58
DNMT1-207ENST00000586588 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
DNMT1-207ENST00000586588 CLIP1P30622 1438 aa18.67■□□□□ 0.58
DNMT1-207ENST00000586588 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.58
DNMT1-207ENST00000586588 APLP2Q06481 763 aa18.64■□□□□ 0.57
DNMT1-207ENST00000586588 KIF21BO75037 1637 aa18.63■□□□□ 0.57
DNMT1-207ENST00000586588 KCNH8Q96L42 1107 aa18.63■□□□□ 0.57
DNMT1-207ENST00000586588 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
DNMT1-207ENST00000586588 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
DNMT1-207ENST00000586588 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
DNMT1-207ENST00000586588 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
DNMT1-207ENST00000586588 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
DNMT1-207ENST00000586588 CUX1P39880 1505 aa18.54■□□□□ 0.56
DNMT1-207ENST00000586588 CUX2O14529 1486 aa18.54■□□□□ 0.56
DNMT1-207ENST00000586588 NESP48681 1621 aa18.5■□□□□ 0.55
DNMT1-207ENST00000586588 ITGAEP38570 1179 aa18.49■□□□□ 0.55
DNMT1-207ENST00000586588 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
DNMT1-207ENST00000586588 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms