RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
HDDC2-210ENST00000609574 ABCC9O60706 1549 aa35.94■■■■□ 3.34
HDDC2-210ENST00000609574 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
HDDC2-210ENST00000609574 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
HDDC2-210ENST00000609574 DNAJC5BQ9UF47 199 aa33.95■■■■□ 3.03
HDDC2-210ENST00000609574 DCAF8L2P0C7V8 631 aa33.83■■■■□ 3.01
HDDC2-210ENST00000609574 NACADO15069 1562 aa33.77■■■■□ 3
HDDC2-210ENST00000609574 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.96
HDDC2-210ENST00000609574 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
HDDC2-210ENST00000609574 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
HDDC2-210ENST00000609574 BICRAQ9NZM4 1560 aa32.93■■■□□ 2.86
HDDC2-210ENST00000609574 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
HDDC2-210ENST00000609574 DCAF1Q9Y4B6 1507 aa32.64■■■□□ 2.82
HDDC2-210ENST00000609574 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
HDDC2-210ENST00000609574 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
HDDC2-210ENST00000609574 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
HDDC2-210ENST00000609574 CC2D2AQ9P2K1 1620 aa32.37■■■□□ 2.77
HDDC2-210ENST00000609574 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
HDDC2-210ENST00000609574 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
HDDC2-210ENST00000609574 NCAPD3P42695 1498 aa31.2■■■□□ 2.58
HDDC2-210ENST00000609574 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
HDDC2-210ENST00000609574 CUX2O14529 1486 aa31.12■■■□□ 2.57
HDDC2-210ENST00000609574 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
HDDC2-210ENST00000609574 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
HDDC2-210ENST00000609574 HMGXB3Q12766 1538 aa30.87■■■□□ 2.53
HDDC2-210ENST00000609574 SMARCA4P51532 1647 aa30.86■■■□□ 2.53
HDDC2-210ENST00000609574 BAZ1BQ9UIG0 1483 aaKnown RBP30.77■■■□□ 2.52
HDDC2-210ENST00000609574 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
HDDC2-210ENST00000609574 NESP48681 1621 aa30.72■■■□□ 2.51
HDDC2-210ENST00000609574 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
HDDC2-210ENST00000609574 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
HDDC2-210ENST00000609574 PDS5BQ9NTI5 1447 aa30.48■■■□□ 2.47
HDDC2-210ENST00000609574 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
HDDC2-210ENST00000609574 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
HDDC2-210ENST00000609574 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
HDDC2-210ENST00000609574 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
HDDC2-210ENST00000609574 MRC2Q9UBG0 1479 aa30.13■■■□□ 2.41
HDDC2-210ENST00000609574 TRIM41Q8WV44 630 aa30.09■■■□□ 2.41
HDDC2-210ENST00000609574 WIZO95785 1651 aa30.01■■■□□ 2.4
HDDC2-210ENST00000609574 WDR62O43379 1518 aa29.98■■■□□ 2.39
HDDC2-210ENST00000609574 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
HDDC2-210ENST00000609574 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
HDDC2-210ENST00000609574 OSCARQ8IYS5 282 aa29.83■■■□□ 2.37
HDDC2-210ENST00000609574 CFTRP13569 1480 aa29.82■■■□□ 2.36
HDDC2-210ENST00000609574 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
HDDC2-210ENST00000609574 TOP2AP11388 1531 aaKnown RBP29.68■■■□□ 2.34
HDDC2-210ENST00000609574 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
HDDC2-210ENST00000609574 IFT140Q96RY7 1462 aa29.41■■■□□ 2.3
HDDC2-210ENST00000609574 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
HDDC2-210ENST00000609574 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
HDDC2-210ENST00000609574 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
HDDC2-210ENST00000609574 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
HDDC2-210ENST00000609574 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
HDDC2-210ENST00000609574 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
HDDC2-210ENST00000609574 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
HDDC2-210ENST00000609574 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
HDDC2-210ENST00000609574 FBLN2P98095 1184 aa29.14■■■□□ 2.26
HDDC2-210ENST00000609574 CYB5RLQ6IPT4 315 aa29.13■■■□□ 2.25
HDDC2-210ENST00000609574 ARHGEF11O15085 1522 aa29.12■■■□□ 2.25
HDDC2-210ENST00000609574 DNMBPQ6XZF7 1577 aa29.12■■■□□ 2.25
HDDC2-210ENST00000609574 AQRO60306 1485 aaKnown RBP eCLIP29.07■■■□□ 2.247e-8■■■■■ 35.6
HDDC2-210ENST00000609574 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
HDDC2-210ENST00000609574 TRHP20396 242 aaPredicted RBP28.97■■■□□ 2.23
HDDC2-210ENST00000609574 POLA1P09884 1462 aaPredicted RBP28.94■■■□□ 2.22
HDDC2-210ENST00000609574 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
HDDC2-210ENST00000609574 SOGA1O94964 1423 aa28.94■■■□□ 2.22
HDDC2-210ENST00000609574 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
HDDC2-210ENST00000609574 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
HDDC2-210ENST00000609574 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
HDDC2-210ENST00000609574 CHD1O14646 1710 aa28.86■■■□□ 2.21
HDDC2-210ENST00000609574 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
HDDC2-210ENST00000609574 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
HDDC2-210ENST00000609574 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
HDDC2-210ENST00000609574 WDR97A6NE52 1622 aa28.7■■■□□ 2.19
HDDC2-210ENST00000609574 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
HDDC2-210ENST00000609574 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
HDDC2-210ENST00000609574 SYNJ1O43426 1573 aa28.64■■■□□ 2.18
HDDC2-210ENST00000609574 CUX1P39880 1505 aa28.6■■■□□ 2.17
HDDC2-210ENST00000609574 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
HDDC2-210ENST00000609574 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
HDDC2-210ENST00000609574 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
HDDC2-210ENST00000609574 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
HDDC2-210ENST00000609574 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
HDDC2-210ENST00000609574 ABCA10Q8WWZ4 1543 aa28.4■■■□□ 2.14
HDDC2-210ENST00000609574 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
HDDC2-210ENST00000609574 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
HDDC2-210ENST00000609574 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
HDDC2-210ENST00000609574 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
HDDC2-210ENST00000609574 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
HDDC2-210ENST00000609574 NUP160Q12769 1436 aa28.15■■■□□ 2.1
HDDC2-210ENST00000609574 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
HDDC2-210ENST00000609574 CEP170Q5SW79 1584 aa28.09■■■□□ 2.09
HDDC2-210ENST00000609574 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
HDDC2-210ENST00000609574 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
HDDC2-210ENST00000609574 ERICH3Q5RHP9 1530 aa28.04■■■□□ 2.08
HDDC2-210ENST00000609574 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
HDDC2-210ENST00000609574 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
HDDC2-210ENST00000609574 NPM1P06748 294 aaKnown RBP eCLIP28.01■■■□□ 2.07
HDDC2-210ENST00000609574 PRG4Q92954 1404 aaPredicted RBP28■■■□□ 2.07
HDDC2-210ENST00000609574 SHROOM2Q13796 1616 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 650.4 ms