RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 NISCHQ9Y2I1 1504 aa51.29■■■■■ 5.8
PICALM-202ENST00000393346 CCDC180Q9P1Z9 1646 aa44.63■■■■■ 4.73
PICALM-202ENST00000393346 ZCCHC6Q5VYS8 1495 aaKnown RBP43.07■■■■■ 4.49
PICALM-202ENST00000393346 DCAF8L2P0C7V8 631 aa42.65■■■■■ 4.42
PICALM-202ENST00000393346 ABCC9O60706 1549 aa42.35■■■■■ 4.37
PICALM-202ENST00000393346 DCAF1Q9Y4B6 1507 aa42.29■■■■■ 4.36
PICALM-202ENST00000393346 SHROOM4Q9ULL8 1493 aa42.13■■■■■ 4.34
PICALM-202ENST00000393346 MYO15BQ96JP2 1530 aa41.74■■■■■ 4.27
PICALM-202ENST00000393346 NACADO15069 1562 aa41.57■■■■■ 4.24
PICALM-202ENST00000393346 RB1CC1Q8TDY2 1594 aa41.24■■■■■ 4.19
PICALM-202ENST00000393346 SCRIBQ14160 1630 aa41.22■■■■■ 4.19
PICALM-202ENST00000393346 SUPT5HO00267 1087 aaKnown RBP40.58■■■■■ 4.09
PICALM-202ENST00000393346 UNC13AQ9UPW8 1703 aa40.55■■■■■ 4.08
PICALM-202ENST00000393346 BICRAQ9NZM4 1560 aa40.02■■■■■ 4
PICALM-202ENST00000393346 PABPN1Q86U42 306 aaKnown RBP eCLIP40.02■■■■■ 4
PICALM-202ENST00000393346 CECR2Q9BXF3 1484 aa39.94■■■■□ 3.98
PICALM-202ENST00000393346 RSF1Q96T23 1441 aaPredicted RBP39.85■■■■□ 3.97
PICALM-202ENST00000393346 MROH2BQ7Z745 1585 aa39.69■■■■□ 3.94
PICALM-202ENST00000393346 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
PICALM-202ENST00000393346 CHIC1Q5VXU3 224 aa39.49■■■■□ 3.91
PICALM-202ENST00000393346 SMARCA4P51532 1647 aa39.44■■■■□ 3.9
PICALM-202ENST00000393346 WIZO95785 1651 aa39.42■■■■□ 3.9
PICALM-202ENST00000393346 TOP2AP11388 1531 aaKnown RBP38.88■■■■□ 3.81
PICALM-202ENST00000393346 PEG3Q9GZU2 1588 aa38.87■■■■□ 3.81
PICALM-202ENST00000393346 EIF4G1Q04637 1599 aaKnown RBP38.84■■■■□ 3.81
PICALM-202ENST00000393346 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
PICALM-202ENST00000393346 SMARCA2P51531 1590 aa38.72■■■■□ 3.79
PICALM-202ENST00000393346 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
PICALM-202ENST00000393346 CCDC88BA6NC98 1476 aa38.56■■■■□ 3.76
PICALM-202ENST00000393346 HRCP23327 699 aa38.55■■■■□ 3.76
PICALM-202ENST00000393346 NCAPD3P42695 1498 aa38.38■■■■□ 3.73
PICALM-202ENST00000393346 PCGF6Q9BYE7 350 aa38.33■■■■□ 3.73
PICALM-202ENST00000393346 HMGXB3Q12766 1538 aa38.31■■■■□ 3.72
PICALM-202ENST00000393346 CC2D2AQ9P2K1 1620 aa38.28■■■■□ 3.72
PICALM-202ENST00000393346 LOC105371045A0A1W2PR82 267 aa38.22■■■■□ 3.71
PICALM-202ENST00000393346 TRIM41Q8WV44 630 aa38.06■■■■□ 3.68
PICALM-202ENST00000393346 ABCC8Q09428 1581 aa37.85■■■■□ 3.65
PICALM-202ENST00000393346 TRIM26Q12899 539 aaPredicted RBP37.71■■■■□ 3.63
PICALM-202ENST00000393346 CFTRP13569 1480 aa37.58■■■■□ 3.61
PICALM-202ENST00000393346 PPARGC1BQ86YN6 1023 aaKnown RBP37.56■■■■□ 3.6
PICALM-202ENST00000393346 WRNQ14191 1432 aaPredicted RBP eCLIP37.52■■■■□ 3.6
PICALM-202ENST00000393346 FAM9AQ8IZU1 332 aaPredicted RBP37.48■■■■□ 3.59
PICALM-202ENST00000393346 CADPSQ9ULU8 1353 aa37.45■■■■□ 3.59
PICALM-202ENST00000393346 DNAJC5BQ9UF47 199 aa37.43■■■■□ 3.58
PICALM-202ENST00000393346 PRDM2Q13029 1718 aa37.41■■■■□ 3.58
PICALM-202ENST00000393346 SYNJ1O43426 1573 aa37.38■■■■□ 3.57
PICALM-202ENST00000393346 NESP48681 1621 aa37.21■■■■□ 3.55
PICALM-202ENST00000393346 TOP2BQ02880 1626 aa37.18■■■■□ 3.54
PICALM-202ENST00000393346 SOGA1O94964 1423 aa37.13■■■■□ 3.53
PICALM-202ENST00000393346 BIVM-ERCC5R4GMW8 1640 aa37.12■■■■□ 3.53
PICALM-202ENST00000393346 CUX1P39880 1505 aa37.09■■■■□ 3.53
PICALM-202ENST00000393346 LAMC3Q9Y6N6 1575 aa37.09■■■■□ 3.53
PICALM-202ENST00000393346 EHMT2Q96KQ7 1210 aa37.07■■■■□ 3.52
PICALM-202ENST00000393346 FANCD2Q9BXW9 1451 aa37.06■■■■□ 3.52
PICALM-202ENST00000393346 ZEB1P37275 1124 aaPredicted RBP37.02■■■■□ 3.52
PICALM-202ENST00000393346 RUSC2Q8N2Y8 1516 aa37.01■■■■□ 3.52
PICALM-202ENST00000393346 EEA1Q15075 1411 aa36.91■■■■□ 3.5
PICALM-202ENST00000393346 CSRNP3Q8WYN3 585 aa36.84■■■■□ 3.49
PICALM-202ENST00000393346 PDS5BQ9NTI5 1447 aa36.82■■■■□ 3.48
PICALM-202ENST00000393346 CEP164Q9UPV0 1460 aa36.81■■■■□ 3.48
PICALM-202ENST00000393346 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
PICALM-202ENST00000393346 DNMBPQ6XZF7 1577 aa36.69■■■■□ 3.46
PICALM-202ENST00000393346 FGD5Q6ZNL6 1462 aa36.69■■■■□ 3.46
PICALM-202ENST00000393346 TOPBP1Q92547 1522 aa36.66■■■■□ 3.46
PICALM-202ENST00000393346 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
PICALM-202ENST00000393346 KIF27Q86VH2 1401 aa36.55■■■■□ 3.44
PICALM-202ENST00000393346 POLA1P09884 1462 aaPredicted RBP36.51■■■■□ 3.43
PICALM-202ENST00000393346 CUX2O14529 1486 aa36.48■■■■□ 3.43
PICALM-202ENST00000393346 GOLGA3Q08378 1498 aa36.48■■■■□ 3.43
PICALM-202ENST00000393346 UBTFP17480 764 aaKnown RBP36.47■■■■□ 3.43
PICALM-202ENST00000393346 KIF21BO75037 1637 aa36.47■■■■□ 3.43
PICALM-202ENST00000393346 RAD54L2Q9Y4B4 1467 aa36.43■■■■□ 3.42
PICALM-202ENST00000393346 TNIKQ9UKE5 1360 aa36.36■■■■□ 3.41
PICALM-202ENST00000393346 RAPGEF2Q9Y4G8 1499 aa36.36■■■■□ 3.41
PICALM-202ENST00000393346 MRC2Q9UBG0 1479 aa36.32■■■■□ 3.4
PICALM-202ENST00000393346 ABCA10Q8WWZ4 1543 aa36.31■■■■□ 3.4
PICALM-202ENST00000393346 ERCC6Q03468 1493 aa36.29■■■■□ 3.4
PICALM-202ENST00000393346 PRXQ9BXM0 1461 aa36.29■■■■□ 3.4
PICALM-202ENST00000393346 CEP162Q5TB80 1403 aa36.24■■■■□ 3.39
PICALM-202ENST00000393346 IGF1RP08069 1367 aa36.23■■■■□ 3.39
PICALM-202ENST00000393346 ERICH3Q5RHP9 1530 aa36.2■■■■□ 3.39
PICALM-202ENST00000393346 WDR97A6NE52 1622 aa36.19■■■■□ 3.38
PICALM-202ENST00000393346 WDR62O43379 1518 aa36.12■■■■□ 3.37
PICALM-202ENST00000393346 TDRD9Q8NDG6 1382 aaKnown RBP36.1■■■■□ 3.37
PICALM-202ENST00000393346 TARBP1Q13395 1621 aaKnown RBP36.1■■■■□ 3.37
PICALM-202ENST00000393346 CARMIL1Q5VZK9 1371 aa36.07■■■■□ 3.36
PICALM-202ENST00000393346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.03■■■■□ 3.36
PICALM-202ENST00000393346 THOC2Q8NI27 1593 aaKnown RBP36.03■■■■□ 3.36
PICALM-202ENST00000393346 ABCA5Q8WWZ7 1642 aa36.01■■■■□ 3.36
PICALM-202ENST00000393346 RANGAP1P46060 587 aaPredicted RBP36■■■■□ 3.35
PICALM-202ENST00000393346 CCER1Q8TC90 406 aaPredicted RBP36■■■■□ 3.35
PICALM-202ENST00000393346 GAPVD1Q14C86 1478 aa35.99■■■■□ 3.35
PICALM-202ENST00000393346 CLIP1P30622 1438 aa35.94■■■■□ 3.34
PICALM-202ENST00000393346 CUL7Q14999 1698 aa35.9■■■■□ 3.34
PICALM-202ENST00000393346 IFT140Q96RY7 1462 aa35.88■■■■□ 3.33
PICALM-202ENST00000393346 AQRO60306 1485 aaKnown RBP eCLIP35.85■■■■□ 3.331e-7■■■■■ 30.3
PICALM-202ENST00000393346 ZNF608Q9ULD9 1512 aaPredicted RBP35.79■■■■□ 3.32
PICALM-202ENST00000393346 PBRM1Q86U86 1689 aa35.79■■■■□ 3.32
PICALM-202ENST00000393346 TTBK1Q5TCY1 1321 aaPredicted RBP35.74■■■■□ 3.31
PICALM-202ENST00000393346 GRIN2BQ13224 1484 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms