RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
DNMT1-203ENST00000540357 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
DNMT1-203ENST00000540357 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
DNMT1-203ENST00000540357 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
DNMT1-203ENST00000540357 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
DNMT1-203ENST00000540357 HRCP23327 699 aa20.72■□□□□ 0.91
DNMT1-203ENST00000540357 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
DNMT1-203ENST00000540357 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-203ENST00000540357 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
DNMT1-203ENST00000540357 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
DNMT1-203ENST00000540357 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
DNMT1-203ENST00000540357 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
DNMT1-203ENST00000540357 MYT1Q01538 1121 aa20.12■□□□□ 0.81
DNMT1-203ENST00000540357 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.8
DNMT1-203ENST00000540357 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
DNMT1-203ENST00000540357 PPARGC1BQ86YN6 1023 aaKnown RBP20.07■□□□□ 0.8
DNMT1-203ENST00000540357 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
DNMT1-203ENST00000540357 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
DNMT1-203ENST00000540357 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
DNMT1-203ENST00000540357 APLP2Q06481 763 aa19.71■□□□□ 0.75
DNMT1-203ENST00000540357 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
DNMT1-203ENST00000540357 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
DNMT1-203ENST00000540357 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
DNMT1-203ENST00000540357 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
DNMT1-203ENST00000540357 DIEXFQ68CQ4 756 aaKnown RBP19.41■□□□□ 0.7
DNMT1-203ENST00000540357 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.7
DNMT1-203ENST00000540357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
DNMT1-203ENST00000540357 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
DNMT1-203ENST00000540357 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
DNMT1-203ENST00000540357 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
DNMT1-203ENST00000540357 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
DNMT1-203ENST00000540357 NEFLP07196 543 aa19.09■□□□□ 0.65
DNMT1-203ENST00000540357 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-203ENST00000540357 ERICH6Q7L0X2 663 aa19.07■□□□□ 0.64
DNMT1-203ENST00000540357 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
DNMT1-203ENST00000540357 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.63
DNMT1-203ENST00000540357 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
DNMT1-203ENST00000540357 CLSPNQ9HAW4 1339 aa18.82■□□□□ 0.6
DNMT1-203ENST00000540357 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
DNMT1-203ENST00000540357 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
DNMT1-203ENST00000540357 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
DNMT1-203ENST00000540357 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
DNMT1-203ENST00000540357 ITGAEP38570 1179 aa18.63■□□□□ 0.57
DNMT1-203ENST00000540357 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
DNMT1-203ENST00000540357 ABCC9O60706 1549 aa18.55■□□□□ 0.56
DNMT1-203ENST00000540357 MIER1Q8N108 512 aa18.51■□□□□ 0.55
DNMT1-203ENST00000540357 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
DNMT1-203ENST00000540357 BCANQ96GW7 911 aa18.45■□□□□ 0.54
DNMT1-203ENST00000540357 EEA1Q15075 1411 aa18.45■□□□□ 0.54
DNMT1-203ENST00000540357 ANP32CO43423 234 aa18.4■□□□□ 0.54
DNMT1-203ENST00000540357 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
DNMT1-203ENST00000540357 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
DNMT1-203ENST00000540357 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.53
DNMT1-203ENST00000540357 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
DNMT1-203ENST00000540357 CLIP1P30622 1438 aa18.28■□□□□ 0.52
DNMT1-203ENST00000540357 FKBP8Q14318 412 aa18.27■□□□□ 0.52
DNMT1-203ENST00000540357 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-203ENST00000540357 NACADO15069 1562 aa18.21■□□□□ 0.51
DNMT1-203ENST00000540357 ANP32EQ9BTT0 268 aa18.19■□□□□ 0.5
DNMT1-203ENST00000540357 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
DNMT1-203ENST00000540357 CEP164Q9UPV0 1460 aa18.16■□□□□ 0.5
DNMT1-203ENST00000540357 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
DNMT1-203ENST00000540357 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
DNMT1-203ENST00000540357 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
DNMT1-203ENST00000540357 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
DNMT1-203ENST00000540357 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
DNMT1-203ENST00000540357 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
DNMT1-203ENST00000540357 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
DNMT1-203ENST00000540357 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
DNMT1-203ENST00000540357 POLR3GLQ9BT43 218 aa18.04■□□□□ 0.48
DNMT1-203ENST00000540357 SOGA1O94964 1423 aa18.04■□□□□ 0.48
DNMT1-203ENST00000540357 TONSLQ96HA7 1378 aa18■□□□□ 0.47
DNMT1-203ENST00000540357 TRIM52Q96A61 297 aa18■□□□□ 0.47
DNMT1-203ENST00000540357 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
DNMT1-203ENST00000540357 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
DNMT1-203ENST00000540357 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
DNMT1-203ENST00000540357 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
DNMT1-203ENST00000540357 ANP32AP39687 249 aaKnown RBP17.94■□□□□ 0.46
DNMT1-203ENST00000540357 WIZO95785 1651 aa17.91■□□□□ 0.46
DNMT1-203ENST00000540357 CNGB1Q14028 1251 aaPredicted RBP17.9■□□□□ 0.46
DNMT1-203ENST00000540357 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
DNMT1-203ENST00000540357 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
DNMT1-203ENST00000540357 P3H3Q8IVL6 736 aa17.83■□□□□ 0.44
DNMT1-203ENST00000540357 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
DNMT1-203ENST00000540357 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
DNMT1-203ENST00000540357 BCL11AQ9H165 835 aa17.78■□□□□ 0.44
DNMT1-203ENST00000540357 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
DNMT1-203ENST00000540357 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
DNMT1-203ENST00000540357 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
DNMT1-203ENST00000540357 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
DNMT1-203ENST00000540357 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
DNMT1-203ENST00000540357 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
DNMT1-203ENST00000540357 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
DNMT1-203ENST00000540357 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
DNMT1-203ENST00000540357 ZBTB47Q9UFB7 747 aaPredicted RBP17.69■□□□□ 0.42
DNMT1-203ENST00000540357 MRS2Q9HD23 443 aa17.68■□□□□ 0.42
DNMT1-203ENST00000540357 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
DNMT1-203ENST00000540357 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
DNMT1-203ENST00000540357 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
DNMT1-203ENST00000540357 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms