RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
MACF1-225ENST00000497807 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
MACF1-225ENST00000497807 MYT1Q01538 1121 aa20.76■□□□□ 0.91
MACF1-225ENST00000497807 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
MACF1-225ENST00000497807 SLC24A1O60721 1099 aa20.04■□□□□ 0.8
MACF1-225ENST00000497807 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
MACF1-225ENST00000497807 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
MACF1-225ENST00000497807 ABCC9O60706 1549 aa19.45■□□□□ 0.7
MACF1-225ENST00000497807 APLP2Q06481 763 aa19.42■□□□□ 0.7
MACF1-225ENST00000497807 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
MACF1-225ENST00000497807 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
MACF1-225ENST00000497807 DAXXQ9UER7 740 aaPredicted RBP19.02■□□□□ 0.63
MACF1-225ENST00000497807 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
MACF1-225ENST00000497807 NACADO15069 1562 aa18.73■□□□□ 0.59
MACF1-225ENST00000497807 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
MACF1-225ENST00000497807 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
MACF1-225ENST00000497807 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
MACF1-225ENST00000497807 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
MACF1-225ENST00000497807 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
MACF1-225ENST00000497807 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
MACF1-225ENST00000497807 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
MACF1-225ENST00000497807 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
MACF1-225ENST00000497807 FAM9AQ8IZU1 332 aaPredicted RBP18.32■□□□□ 0.52
MACF1-225ENST00000497807 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
MACF1-225ENST00000497807 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
MACF1-225ENST00000497807 EIF5BO60841 1220 aaKnown RBP18.17■□□□□ 0.5
MACF1-225ENST00000497807 HRCP23327 699 aa18.17■□□□□ 0.5
MACF1-225ENST00000497807 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
MACF1-225ENST00000497807 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
MACF1-225ENST00000497807 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
MACF1-225ENST00000497807 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
MACF1-225ENST00000497807 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
MACF1-225ENST00000497807 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
MACF1-225ENST00000497807 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
MACF1-225ENST00000497807 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
MACF1-225ENST00000497807 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
MACF1-225ENST00000497807 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
MACF1-225ENST00000497807 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
MACF1-225ENST00000497807 UBE2Q2Q8WVN8 375 aa17.55■□□□□ 0.4
MACF1-225ENST00000497807 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
MACF1-225ENST00000497807 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
MACF1-225ENST00000497807 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
MACF1-225ENST00000497807 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
MACF1-225ENST00000497807 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
MACF1-225ENST00000497807 ARXQ96QS3 562 aa17.46■□□□□ 0.39
MACF1-225ENST00000497807 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
MACF1-225ENST00000497807 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
MACF1-225ENST00000497807 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
MACF1-225ENST00000497807 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
MACF1-225ENST00000497807 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
MACF1-225ENST00000497807 WIZO95785 1651 aa17.34■□□□□ 0.37
MACF1-225ENST00000497807 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
MACF1-225ENST00000497807 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
MACF1-225ENST00000497807 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
MACF1-225ENST00000497807 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
MACF1-225ENST00000497807 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
MACF1-225ENST00000497807 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
MACF1-225ENST00000497807 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
MACF1-225ENST00000497807 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
MACF1-225ENST00000497807 KCNA4P22459 653 aa17.14■□□□□ 0.33
MACF1-225ENST00000497807 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
MACF1-225ENST00000497807 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
MACF1-225ENST00000497807 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
MACF1-225ENST00000497807 PKNOX2Q96KN3 472 aa17.09■□□□□ 0.33
MACF1-225ENST00000497807 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
MACF1-225ENST00000497807 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.31
MACF1-225ENST00000497807 GTF3C3Q9Y5Q9 886 aa17.01■□□□□ 0.31
MACF1-225ENST00000497807 AMER1Q5JTC6 1135 aaPredicted RBP16.95■□□□□ 0.3
MACF1-225ENST00000497807 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
MACF1-225ENST00000497807 NESP48681 1621 aa16.9■□□□□ 0.3
MACF1-225ENST00000497807 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
MACF1-225ENST00000497807 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
MACF1-225ENST00000497807 NEFLP07196 543 aa16.83■□□□□ 0.29
MACF1-225ENST00000497807 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
MACF1-225ENST00000497807 CFTRP13569 1480 aa16.82■□□□□ 0.28
MACF1-225ENST00000497807 HOMEZQ8IX15 550 aa16.79■□□□□ 0.28
MACF1-225ENST00000497807 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
MACF1-225ENST00000497807 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
MACF1-225ENST00000497807 PDE4CQ08493 712 aa16.74■□□□□ 0.27
MACF1-225ENST00000497807 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
MACF1-225ENST00000497807 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
MACF1-225ENST00000497807 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
MACF1-225ENST00000497807 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
MACF1-225ENST00000497807 TULP1O00294 542 aaPredicted RBP16.66■□□□□ 0.26
MACF1-225ENST00000497807 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
MACF1-225ENST00000497807 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
MACF1-225ENST00000497807 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
MACF1-225ENST00000497807 FGD1P98174 961 aa16.53■□□□□ 0.24
MACF1-225ENST00000497807 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
MACF1-225ENST00000497807 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
MACF1-225ENST00000497807 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
MACF1-225ENST00000497807 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
MACF1-225ENST00000497807 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
MACF1-225ENST00000497807 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
MACF1-225ENST00000497807 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
MACF1-225ENST00000497807 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
MACF1-225ENST00000497807 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
MACF1-225ENST00000497807 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
MACF1-225ENST00000497807 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
MACF1-225ENST00000497807 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms