RNA–Protein interactions for RNA: ENST00000369144.7

EIF3A-201, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3A, Length 6,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-201ENST00000369144 DCAF8L2P0C7V8 631 aa21.75■■□□□ 1.07
EIF3A-201ENST00000369144 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
EIF3A-201ENST00000369144 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
EIF3A-201ENST00000369144 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
EIF3A-201ENST00000369144 ERICH6Q7L0X2 663 aa20.09■□□□□ 0.81
EIF3A-201ENST00000369144 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
EIF3A-201ENST00000369144 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
EIF3A-201ENST00000369144 APLP2Q06481 763 aa19.82■□□□□ 0.76
EIF3A-201ENST00000369144 MYT1Q01538 1121 aa19.65■□□□□ 0.74
EIF3A-201ENST00000369144 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
EIF3A-201ENST00000369144 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
EIF3A-201ENST00000369144 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
EIF3A-201ENST00000369144 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
EIF3A-201ENST00000369144 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
EIF3A-201ENST00000369144 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
EIF3A-201ENST00000369144 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
EIF3A-201ENST00000369144 NEFLP07196 543 aa19.22■□□□□ 0.67
EIF3A-201ENST00000369144 DAXXQ9UER7 740 aaPredicted RBP19.02■□□□□ 0.64
EIF3A-201ENST00000369144 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
EIF3A-201ENST00000369144 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
EIF3A-201ENST00000369144 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
EIF3A-201ENST00000369144 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
EIF3A-201ENST00000369144 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
EIF3A-201ENST00000369144 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
EIF3A-201ENST00000369144 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
EIF3A-201ENST00000369144 SLC4A1APQ9BWU0 796 aaKnown RBP18.66■□□□□ 0.58
EIF3A-201ENST00000369144 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
EIF3A-201ENST00000369144 ITGAEP38570 1179 aa18.61■□□□□ 0.57
EIF3A-201ENST00000369144 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
EIF3A-201ENST00000369144 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
EIF3A-201ENST00000369144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
EIF3A-201ENST00000369144 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
EIF3A-201ENST00000369144 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
EIF3A-201ENST00000369144 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
EIF3A-201ENST00000369144 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
EIF3A-201ENST00000369144 BCANQ96GW7 911 aa18.19■□□□□ 0.5
EIF3A-201ENST00000369144 HRCP23327 699 aa18.14■□□□□ 0.49
EIF3A-201ENST00000369144 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
EIF3A-201ENST00000369144 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
EIF3A-201ENST00000369144 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
EIF3A-201ENST00000369144 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
EIF3A-201ENST00000369144 NEUROD1Q13562 356 aa17.89■□□□□ 0.45
EIF3A-201ENST00000369144 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
EIF3A-201ENST00000369144 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
EIF3A-201ENST00000369144 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
EIF3A-201ENST00000369144 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
EIF3A-201ENST00000369144 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
EIF3A-201ENST00000369144 LOC105371045A0A1W2PR82 267 aa17.84■□□□□ 0.45
EIF3A-201ENST00000369144 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
EIF3A-201ENST00000369144 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
EIF3A-201ENST00000369144 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
EIF3A-201ENST00000369144 ANP32CO43423 234 aa17.62■□□□□ 0.41
EIF3A-201ENST00000369144 ARXQ96QS3 562 aa17.62■□□□□ 0.41
EIF3A-201ENST00000369144 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
EIF3A-201ENST00000369144 NEFMP07197 916 aa17.57■□□□□ 0.4
EIF3A-201ENST00000369144 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
EIF3A-201ENST00000369144 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
EIF3A-201ENST00000369144 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
EIF3A-201ENST00000369144 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
EIF3A-201ENST00000369144 FBLN2P98095 1184 aa17.42■□□□□ 0.38
EIF3A-201ENST00000369144 NBR1Q14596 966 aa17.4■□□□□ 0.38
EIF3A-201ENST00000369144 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
EIF3A-201ENST00000369144 A0A0G2JS52 829 aa17.33■□□□□ 0.37
EIF3A-201ENST00000369144 GLIPR1L2Q4G1C9 344 aa17.33■□□□□ 0.36
EIF3A-201ENST00000369144 CDK11BP21127 795 aaKnown RBP17.3■□□□□ 0.36
EIF3A-201ENST00000369144 TULP1O00294 542 aaPredicted RBP17.3■□□□□ 0.36
EIF3A-201ENST00000369144 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
EIF3A-201ENST00000369144 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.35
EIF3A-201ENST00000369144 FKBP8Q14318 412 aa17.27■□□□□ 0.35
EIF3A-201ENST00000369144 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
EIF3A-201ENST00000369144 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
EIF3A-201ENST00000369144 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
EIF3A-201ENST00000369144 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
EIF3A-201ENST00000369144 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
EIF3A-201ENST00000369144 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
EIF3A-201ENST00000369144 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
EIF3A-201ENST00000369144 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
EIF3A-201ENST00000369144 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
EIF3A-201ENST00000369144 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
EIF3A-201ENST00000369144 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
EIF3A-201ENST00000369144 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
EIF3A-201ENST00000369144 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
EIF3A-201ENST00000369144 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
EIF3A-201ENST00000369144 IRX6P78412 446 aaPredicted RBP17.06■□□□□ 0.32
EIF3A-201ENST00000369144 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
EIF3A-201ENST00000369144 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
EIF3A-201ENST00000369144 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
EIF3A-201ENST00000369144 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
EIF3A-201ENST00000369144 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
EIF3A-201ENST00000369144 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
EIF3A-201ENST00000369144 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
EIF3A-201ENST00000369144 TRIM44Q96DX7 344 aaPredicted RBP16.94■□□□□ 0.3
EIF3A-201ENST00000369144 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
EIF3A-201ENST00000369144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.38e-11■■■■□ 20.7
EIF3A-201ENST00000369144 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
EIF3A-201ENST00000369144 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
EIF3A-201ENST00000369144 DNTTIP2Q5QJE6 756 aaKnown RBP16.91■□□□□ 0.3
EIF3A-201ENST00000369144 PTMAP06454 111 aaKnown RBP16.9■□□□□ 0.3
EIF3A-201ENST00000369144 TMC1Q8TDI8 760 aa16.89■□□□□ 0.29
EIF3A-201ENST00000369144 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms