Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22■■□□□ 1.11
LIN7CQ9NUP9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LIN7CQ9NUP9 AL161658.1-201ENST00000623641 1967 ntBASIC21.99■■□□□ 1.11
LIN7CQ9NUP9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LIN7CQ9NUP9 ST7-AS1-201ENST00000456775 1889 ntBASIC21.98■■□□□ 1.11
LIN7CQ9NUP9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIN7CQ9NUP9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LIN7CQ9NUP9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIN7CQ9NUP9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.98■■□□□ 1.11
LIN7CQ9NUP9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LIN7CQ9NUP9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.96■■□□□ 1.11
LIN7CQ9NUP9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
LIN7CQ9NUP9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LIN7CQ9NUP9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
LIN7CQ9NUP9 AC139426.1-201ENST00000568218 2529 ntBASIC21.95■■□□□ 1.1
LIN7CQ9NUP9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LIN7CQ9NUP9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.94■■□□□ 1.1
LIN7CQ9NUP9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LIN7CQ9NUP9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
LIN7CQ9NUP9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LIN7CQ9NUP9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 SETD8P1-201ENST00000623146 1180 ntBASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LIN7CQ9NUP9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIN7CQ9NUP9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIN7CQ9NUP9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LIN7CQ9NUP9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LIN7CQ9NUP9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIN7CQ9NUP9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIN7CQ9NUP9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.88■■□□□ 1.09
LIN7CQ9NUP9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LIN7CQ9NUP9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LIN7CQ9NUP9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
LIN7CQ9NUP9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
LIN7CQ9NUP9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LIN7CQ9NUP9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LIN7CQ9NUP9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIN7CQ9NUP9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIN7CQ9NUP9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIN7CQ9NUP9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LIN7CQ9NUP9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIN7CQ9NUP9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIN7CQ9NUP9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LIN7CQ9NUP9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.82■■□□□ 1.08
LIN7CQ9NUP9 AL133380.1-201ENST00000506013 324 ntBASIC21.82■■□□□ 1.08
LIN7CQ9NUP9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.82■■□□□ 1.08
LIN7CQ9NUP9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LIN7CQ9NUP9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LIN7CQ9NUP9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIN7CQ9NUP9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LIN7CQ9NUP9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LIN7CQ9NUP9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIN7CQ9NUP9 AL135925.1-201ENST00000605920 1701 ntBASIC21.79■■□□□ 1.08
LIN7CQ9NUP9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIN7CQ9NUP9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIN7CQ9NUP9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LIN7CQ9NUP9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LIN7CQ9NUP9 AC097358.2-201ENST00000607541 1159 ntBASIC21.77■■□□□ 1.08
LIN7CQ9NUP9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LIN7CQ9NUP9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIN7CQ9NUP9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LIN7CQ9NUP9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LIN7CQ9NUP9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIN7CQ9NUP9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
LIN7CQ9NUP9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIN7CQ9NUP9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LIN7CQ9NUP9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LIN7CQ9NUP9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LIN7CQ9NUP9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LIN7CQ9NUP9 AC136428.2-201ENST00000563187 214 ntBASIC21.73■■□□□ 1.07
LIN7CQ9NUP9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.73■■□□□ 1.07
LIN7CQ9NUP9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LIN7CQ9NUP9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.73■■□□□ 1.07
LIN7CQ9NUP9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LIN7CQ9NUP9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIN7CQ9NUP9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.72■■□□□ 1.07
LIN7CQ9NUP9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LIN7CQ9NUP9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LIN7CQ9NUP9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LIN7CQ9NUP9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LIN7CQ9NUP9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.71■■□□□ 1.07
LIN7CQ9NUP9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LIN7CQ9NUP9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.71■■□□□ 1.07
LIN7CQ9NUP9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LIN7CQ9NUP9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIN7CQ9NUP9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.7■■□□□ 1.06
LIN7CQ9NUP9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIN7CQ9NUP9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LIN7CQ9NUP9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LIN7CQ9NUP9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.67■■□□□ 1.06
LIN7CQ9NUP9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LIN7CQ9NUP9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.67■■□□□ 1.06
LIN7CQ9NUP9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.67■■□□□ 1.06
LIN7CQ9NUP9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LIN7CQ9NUP9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms