Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MUC4Q99102 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MUC4Q99102 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MUC4Q99102 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.46■□□□□ 0.71
MUC4Q99102 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MUC4Q99102 RPS2P35-201ENST00000443417 897 ntBASIC19.45■□□□□ 0.7
MUC4Q99102 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
MUC4Q99102 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MUC4Q99102 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MUC4Q99102 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MUC4Q99102 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.44■□□□□ 0.7
MUC4Q99102 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MUC4Q99102 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MUC4Q99102 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MUC4Q99102 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.43■□□□□ 0.7
MUC4Q99102 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
MUC4Q99102 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MUC4Q99102 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MUC4Q99102 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MUC4Q99102 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MUC4Q99102 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MUC4Q99102 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MUC4Q99102 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MUC4Q99102 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MUC4Q99102 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.39■□□□□ 0.69
MUC4Q99102 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MUC4Q99102 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MUC4Q99102 RARRES2P7-201ENST00000567349 469 ntBASIC19.38■□□□□ 0.69
MUC4Q99102 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.38■□□□□ 0.69
MUC4Q99102 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MUC4Q99102 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MUC4Q99102 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MUC4Q99102 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MUC4Q99102 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MUC4Q99102 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
MUC4Q99102 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MUC4Q99102 AL135925.1-201ENST00000605920 1701 ntBASIC19.35■□□□□ 0.69
MUC4Q99102 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MUC4Q99102 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MUC4Q99102 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MUC4Q99102 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MUC4Q99102 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.33■□□□□ 0.69
MUC4Q99102 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MUC4Q99102 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MUC4Q99102 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MUC4Q99102 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MUC4Q99102 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MUC4Q99102 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.31■□□□□ 0.68
MUC4Q99102 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.31■□□□□ 0.68
MUC4Q99102 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MUC4Q99102 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MUC4Q99102 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MUC4Q99102 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MUC4Q99102 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.28■□□□□ 0.68
MUC4Q99102 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MUC4Q99102 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MUC4Q99102 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MUC4Q99102 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.26■□□□□ 0.67
MUC4Q99102 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MUC4Q99102 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MUC4Q99102 AL133380.1-201ENST00000506013 324 ntBASIC19.25■□□□□ 0.67
MUC4Q99102 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.24■□□□□ 0.67
MUC4Q99102 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MUC4Q99102 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MUC4Q99102 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MUC4Q99102 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MUC4Q99102 SETD8P1-201ENST00000623146 1180 ntBASIC19.23■□□□□ 0.67
MUC4Q99102 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.23■□□□□ 0.67
MUC4Q99102 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MUC4Q99102 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MUC4Q99102 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MUC4Q99102 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MUC4Q99102 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MUC4Q99102 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MUC4Q99102 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MUC4Q99102 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MUC4Q99102 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MUC4Q99102 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MUC4Q99102 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
MUC4Q99102 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MUC4Q99102 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.19■□□□□ 0.66
MUC4Q99102 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MUC4Q99102 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MUC4Q99102 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.18■□□□□ 0.66
MUC4Q99102 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MUC4Q99102 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.17■□□□□ 0.66
MUC4Q99102 WASH5P-204ENST00000632292 975 ntBASIC19.17■□□□□ 0.66
MUC4Q99102 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MUC4Q99102 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MUC4Q99102 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MUC4Q99102 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MUC4Q99102 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MUC4Q99102 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MUC4Q99102 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MUC4Q99102 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MUC4Q99102 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MUC4Q99102 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MUC4Q99102 AC136428.2-201ENST00000563187 214 ntBASIC19.15■□□□□ 0.66
MUC4Q99102 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MUC4Q99102 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms