Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 SUZ12P1-203ENST00000578195 985 ntBASIC21.84■■□□□ 1.09
R3HDM4Q96D70 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.83■■□□□ 1.09
R3HDM4Q96D70 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
R3HDM4Q96D70 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
R3HDM4Q96D70 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
R3HDM4Q96D70 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
R3HDM4Q96D70 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
R3HDM4Q96D70 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3HDM4Q96D70 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HDM4Q96D70 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 RPS2P35-201ENST00000443417 897 ntBASIC21.75■■□□□ 1.07
R3HDM4Q96D70 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3HDM4Q96D70 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
R3HDM4Q96D70 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3HDM4Q96D70 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3HDM4Q96D70 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3HDM4Q96D70 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HDM4Q96D70 ST7-AS1-201ENST00000456775 1889 ntBASIC21.72■■□□□ 1.07
R3HDM4Q96D70 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HDM4Q96D70 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HDM4Q96D70 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HDM4Q96D70 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
R3HDM4Q96D70 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.68■■□□□ 1.06
R3HDM4Q96D70 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HDM4Q96D70 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HDM4Q96D70 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HDM4Q96D70 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
R3HDM4Q96D70 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 CAHM-201ENST00000604200 896 ntBASIC21.62■■□□□ 1.05
R3HDM4Q96D70 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HDM4Q96D70 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.6■■□□□ 1.05
R3HDM4Q96D70 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HDM4Q96D70 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HDM4Q96D70 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HDM4Q96D70 AL135925.1-201ENST00000605920 1701 ntBASIC21.58■■□□□ 1.05
R3HDM4Q96D70 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HDM4Q96D70 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3HDM4Q96D70 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HDM4Q96D70 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HDM4Q96D70 AL133380.1-201ENST00000506013 324 ntBASIC21.57■■□□□ 1.04
R3HDM4Q96D70 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HDM4Q96D70 AL391121.1-201ENST00000607967 1349 ntBASIC21.56■■□□□ 1.04
R3HDM4Q96D70 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HDM4Q96D70 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
R3HDM4Q96D70 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HDM4Q96D70 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
R3HDM4Q96D70 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3HDM4Q96D70 AP006261.1-201ENST00000584783 668 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms