Protein–RNA interactions for Protein: P09234

SNRPC, U1 small nuclear ribonucleoprotein C, humanhuman

Known RBP Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP09234 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPCP09234 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPCP09234 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SNRPCP09234 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPCP09234 DYNLL1-208ENST00000550178 581 ntBASIC20.76■□□□□ 0.91
SNRPCP09234 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPCP09234 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPCP09234 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPCP09234 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPCP09234 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPCP09234 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
SNRPCP09234 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRPCP09234 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRPCP09234 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRPCP09234 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRPCP09234 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNRPCP09234 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRPCP09234 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRPCP09234 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRPCP09234 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNRPCP09234 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNRPCP09234 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.69■□□□□ 0.9
SNRPCP09234 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRPCP09234 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRPCP09234 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRPCP09234 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRPCP09234 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SNRPCP09234 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPCP09234 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SNRPCP09234 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPCP09234 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPCP09234 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPCP09234 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.64■□□□□ 0.9
SNRPCP09234 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPCP09234 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPCP09234 ST7-AS1-201ENST00000456775 1889 ntBASIC20.62■□□□□ 0.89
SNRPCP09234 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPCP09234 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.62■□□□□ 0.89
SNRPCP09234 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SNRPCP09234 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPCP09234 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPCP09234 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNRPCP09234 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPCP09234 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPCP09234 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SNRPCP09234 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPCP09234 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPCP09234 AL031258.1-201ENST00000623562 325 ntBASIC20.6■□□□□ 0.89
SNRPCP09234 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPCP09234 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.58■□□□□ 0.89
SNRPCP09234 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPCP09234 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPCP09234 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.57■□□□□ 0.88
SNRPCP09234 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPCP09234 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SNRPCP09234 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPCP09234 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPCP09234 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SNRPCP09234 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPCP09234 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPCP09234 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPCP09234 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPCP09234 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPCP09234 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.53■□□□□ 0.88
SNRPCP09234 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.53■□□□□ 0.88
SNRPCP09234 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPCP09234 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPCP09234 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNRPCP09234 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPCP09234 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNRPCP09234 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRPCP09234 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNRPCP09234 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPCP09234 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
SNRPCP09234 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNRPCP09234 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPCP09234 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPCP09234 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPCP09234 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRPCP09234 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPCP09234 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPCP09234 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
SNRPCP09234 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPCP09234 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPCP09234 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SNRPCP09234 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SNRPCP09234 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPCP09234 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPCP09234 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPCP09234 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPCP09234 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SNRPCP09234 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPCP09234 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPCP09234 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRPCP09234 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPCP09234 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms