RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 NISCHQ9Y2I1 1504 aa46.47■■■■■ 5.03
ESRRA-203ENST00000406310 SHROOM4Q9ULL8 1493 aa40.03■■■■■ 4
ESRRA-203ENST00000406310 HRCP23327 699 aa39.99■■■■□ 3.99
ESRRA-203ENST00000406310 SUPT5HO00267 1087 aaKnown RBP39.8■■■■□ 3.96
ESRRA-203ENST00000406310 ZCCHC6Q5VYS8 1495 aaKnown RBP39.55■■■■□ 3.92
ESRRA-203ENST00000406310 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
ESRRA-203ENST00000406310 CHIC1Q5VXU3 224 aa39.32■■■■□ 3.88
ESRRA-203ENST00000406310 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
ESRRA-203ENST00000406310 PCGF6Q9BYE7 350 aa39.08■■■■□ 3.85
ESRRA-203ENST00000406310 DCAF1Q9Y4B6 1507 aa38.98■■■■□ 3.83
ESRRA-203ENST00000406310 PPARGC1BQ86YN6 1023 aaKnown RBP38.65■■■■□ 3.78
ESRRA-203ENST00000406310 PELP1Q8IZL8 1130 aaKnown RBP38.39■■■■□ 3.74
ESRRA-203ENST00000406310 TRIM26Q12899 539 aaPredicted RBP38.32■■■■□ 3.72
ESRRA-203ENST00000406310 ZEB1P37275 1124 aaPredicted RBP38.15■■■■□ 3.7
ESRRA-203ENST00000406310 LOC105371045A0A1W2PR82 267 aa38.03■■■■□ 3.68
ESRRA-203ENST00000406310 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
ESRRA-203ENST00000406310 ABCC9O60706 1549 aa37.56■■■■□ 3.6
ESRRA-203ENST00000406310 SCAF1Q9H7N4 1312 aaKnown RBP37.36■■■■□ 3.57
ESRRA-203ENST00000406310 TRIM41Q8WV44 630 aa37.14■■■■□ 3.54
ESRRA-203ENST00000406310 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
ESRRA-203ENST00000406310 RB1CC1Q8TDY2 1594 aa37.02■■■■□ 3.52
ESRRA-203ENST00000406310 MYT1Q01538 1121 aa36.96■■■■□ 3.51
ESRRA-203ENST00000406310 ACIN1Q9UKV3 1341 aaKnown RBP36.81■■■■□ 3.48
ESRRA-203ENST00000406310 SCRIBQ14160 1630 aa36.67■■■■□ 3.46
ESRRA-203ENST00000406310 FAM9AQ8IZU1 332 aaPredicted RBP36.67■■■■□ 3.46
ESRRA-203ENST00000406310 CENPBP07199 599 aaPredicted RBP36.59■■■■□ 3.45
ESRRA-203ENST00000406310 NEUROD1Q13562 356 aa36.5■■■■□ 3.43
ESRRA-203ENST00000406310 CCER1Q8TC90 406 aaPredicted RBP36.46■■■■□ 3.43
ESRRA-203ENST00000406310 DIEXFQ68CQ4 756 aaKnown RBP36.36■■■■□ 3.41
ESRRA-203ENST00000406310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
ESRRA-203ENST00000406310 GTF3C3Q9Y5Q9 886 aa36.3■■■■□ 3.4
ESRRA-203ENST00000406310 NACADO15069 1562 aa36.26■■■■□ 3.39
ESRRA-203ENST00000406310 WRNQ14191 1432 aaPredicted RBP eCLIP36.17■■■■□ 3.388e-13■■■■□ 21.5
ESRRA-203ENST00000406310 EHMT2Q96KQ7 1210 aa36.16■■■■□ 3.38
ESRRA-203ENST00000406310 MROH2BQ7Z745 1585 aa36.08■■■■□ 3.37
ESRRA-203ENST00000406310 EIF4G1Q04637 1599 aaKnown RBP36.04■■■■□ 3.36
ESRRA-203ENST00000406310 CECR2Q9BXF3 1484 aa36.01■■■■□ 3.35
ESRRA-203ENST00000406310 BAZ1AQ9NRL2 1556 aaPredicted RBP36■■■■□ 3.35
ESRRA-203ENST00000406310 WIZO95785 1651 aa35.97■■■■□ 3.35
ESRRA-203ENST00000406310 ZNF316A6NFI3 1004 aaPredicted RBP35.87■■■■□ 3.33
ESRRA-203ENST00000406310 CEP162Q5TB80 1403 aa35.78■■■■□ 3.32
ESRRA-203ENST00000406310 TNIKQ9UKE5 1360 aa35.72■■■■□ 3.31
ESRRA-203ENST00000406310 EEA1Q15075 1411 aa35.67■■■■□ 3.3
ESRRA-203ENST00000406310 TOP2AP11388 1531 aaKnown RBP35.54■■■■□ 3.28
ESRRA-203ENST00000406310 CCDC88BA6NC98 1476 aa35.52■■■■□ 3.28
ESRRA-203ENST00000406310 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
ESRRA-203ENST00000406310 YTHDC1Q96MU7 727 aaKnown RBP35.37■■■■□ 3.25
ESRRA-203ENST00000406310 CLSPNQ9HAW4 1339 aa35.37■■■■□ 3.25
ESRRA-203ENST00000406310 GOLGA3Q08378 1498 aa35.36■■■■□ 3.25
ESRRA-203ENST00000406310 TTBK1Q5TCY1 1321 aaPredicted RBP35.35■■■■□ 3.25
ESRRA-203ENST00000406310 SMARCA2P51531 1590 aa35.32■■■■□ 3.25
ESRRA-203ENST00000406310 MIER1Q8N108 512 aa35.32■■■■□ 3.24
ESRRA-203ENST00000406310 SOGA1O94964 1423 aa35.32■■■■□ 3.24
ESRRA-203ENST00000406310 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.24
ESRRA-203ENST00000406310 CSRNP3Q8WYN3 585 aa35.32■■■■□ 3.24
ESRRA-203ENST00000406310 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
ESRRA-203ENST00000406310 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
ESRRA-203ENST00000406310 UBTFP17480 764 aaKnown RBP35.21■■■■□ 3.23
ESRRA-203ENST00000406310 KIF21BO75037 1637 aa35.08■■■■□ 3.21
ESRRA-203ENST00000406310 CEP164Q9UPV0 1460 aa35.05■■■■□ 3.2
ESRRA-203ENST00000406310 RUSC2Q8N2Y8 1516 aa35.04■■■■□ 3.2
ESRRA-203ENST00000406310 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
ESRRA-203ENST00000406310 HNRNPUL2Q1KMD3 747 aaKnown RBP34.96■■■■□ 3.19
ESRRA-203ENST00000406310 VPS8Q8N3P4 1428 aa34.95■■■■□ 3.19
ESRRA-203ENST00000406310 CLIP1P30622 1438 aa34.91■■■■□ 3.18
ESRRA-203ENST00000406310 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
ESRRA-203ENST00000406310 APLP2Q06481 763 aa34.82■■■■□ 3.16
ESRRA-203ENST00000406310 SUPT16HQ9Y5B9 1047 aaKnown RBP34.76■■■■□ 3.16
ESRRA-203ENST00000406310 SYNJ1O43426 1573 aa34.62■■■■□ 3.13
ESRRA-203ENST00000406310 DHX57Q6P158 1386 aaKnown RBP34.6■■■■□ 3.13
ESRRA-203ENST00000406310 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.12
ESRRA-203ENST00000406310 ANP32EQ9BTT0 268 aa34.5■■■■□ 3.11
ESRRA-203ENST00000406310 TSHZ2Q9NRE2 1034 aa34.47■■■■□ 3.11
ESRRA-203ENST00000406310 RAPGEF2Q9Y4G8 1499 aa34.47■■■■□ 3.11
ESRRA-203ENST00000406310 CUX2O14529 1486 aa34.37■■■■□ 3.09
ESRRA-203ENST00000406310 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
ESRRA-203ENST00000406310 RRBP1Q9P2E9 1410 aaKnown RBP34.32■■■■□ 3.08
ESRRA-203ENST00000406310 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
ESRRA-203ENST00000406310 ARAP1Q96P48 1450 aa34.2■■■■□ 3.07
ESRRA-203ENST00000406310 BIVM-ERCC5R4GMW8 1640 aa34.13■■■■□ 3.05
ESRRA-203ENST00000406310 PRXQ9BXM0 1461 aa34.12■■■■□ 3.05
ESRRA-203ENST00000406310 CCNB3Q8WWL7 1395 aa34.05■■■■□ 3.04
ESRRA-203ENST00000406310 KANK4Q5T7N3 995 aaPredicted RBP33.99■■■■□ 3.03
ESRRA-203ENST00000406310 ATAD2BQ9ULI0 1458 aa33.99■■■■□ 3.03
ESRRA-203ENST00000406310 RANGAP1P46060 587 aaPredicted RBP33.98■■■■□ 3.03
ESRRA-203ENST00000406310 BCL11AQ9H165 835 aa33.95■■■■□ 3.03
ESRRA-203ENST00000406310 MAPKBP1O60336 1514 aa33.89■■■■□ 3.02
ESRRA-203ENST00000406310 NEFLP07196 543 aa33.88■■■■□ 3.01
ESRRA-203ENST00000406310 FKBP8Q14318 412 aa33.87■■■■□ 3.01
ESRRA-203ENST00000406310 RAB3GAP2Q9H2M9 1393 aa33.82■■■■□ 3
ESRRA-203ENST00000406310 MAP3K1Q13233 1512 aa33.82■■■■□ 3
ESRRA-203ENST00000406310 KCNH8Q96L42 1107 aa33.79■■■■□ 3
ESRRA-203ENST00000406310 TIMELESSQ9UNS1 1208 aa33.79■■■■□ 3
ESRRA-203ENST00000406310 CCER2I3L3R5 266 aa33.76■■■■□ 3
ESRRA-203ENST00000406310 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
ESRRA-203ENST00000406310 BCANQ96GW7 911 aa33.75■■■□□ 2.99
ESRRA-203ENST00000406310 ARHGAP35Q9NRY4 1499 aa33.73■■■□□ 2.99
ESRRA-203ENST00000406310 RBM19Q9Y4C8 960 aaKnown RBP33.73■■■□□ 2.99
ESRRA-203ENST00000406310 SETD5Q9C0A6 1442 aa33.72■■■□□ 2.99
ESRRA-203ENST00000406310 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms