RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 NISCHQ9Y2I1 1504 aa46.79■■■■■ 5.08
CCND3-202ENST00000372988 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
CCND3-202ENST00000372988 SUPT5HO00267 1087 aaKnown RBP40.21■■■■■ 4.03
CCND3-202ENST00000372988 HRCP23327 699 aa40.18■■■■■ 4.02
CCND3-202ENST00000372988 MYO15BQ96JP2 1530 aa39.85■■■■□ 3.97
CCND3-202ENST00000372988 ZCCHC6Q5VYS8 1495 aaKnown RBP39.8■■■■□ 3.96
CCND3-202ENST00000372988 CHIC1Q5VXU3 224 aa39.67■■■■□ 3.94
CCND3-202ENST00000372988 PCGF6Q9BYE7 350 aa39.39■■■■□ 3.9
CCND3-202ENST00000372988 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
CCND3-202ENST00000372988 PPARGC1BQ86YN6 1023 aaKnown RBP39.14■■■■□ 3.86
CCND3-202ENST00000372988 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
CCND3-202ENST00000372988 LOC105371045A0A1W2PR82 267 aa38.51■■■■□ 3.76
CCND3-202ENST00000372988 TRIM26Q12899 539 aaPredicted RBP38.45■■■■□ 3.75
CCND3-202ENST00000372988 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
CCND3-202ENST00000372988 PELP1Q8IZL8 1130 aaKnown RBP38.11■■■■□ 3.69
CCND3-202ENST00000372988 ZEB1P37275 1124 aaPredicted RBP38.06■■■■□ 3.68
CCND3-202ENST00000372988 ABCC9O60706 1549 aa37.75■■■■□ 3.63
CCND3-202ENST00000372988 SCAF1Q9H7N4 1312 aaKnown RBP37.66■■■■□ 3.62
CCND3-202ENST00000372988 RSF1Q96T23 1441 aaPredicted RBP37.42■■■■□ 3.58
CCND3-202ENST00000372988 TRIM41Q8WV44 630 aa37.38■■■■□ 3.57
CCND3-202ENST00000372988 RB1CC1Q8TDY2 1594 aa37.18■■■■□ 3.54
CCND3-202ENST00000372988 FAM9AQ8IZU1 332 aaPredicted RBP37.1■■■■□ 3.53
CCND3-202ENST00000372988 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
CCND3-202ENST00000372988 ACIN1Q9UKV3 1341 aaKnown RBP36.95■■■■□ 3.5
CCND3-202ENST00000372988 NEUROD1Q13562 356 aa36.79■■■■□ 3.48
CCND3-202ENST00000372988 EHMT2Q96KQ7 1210 aa36.72■■■■□ 3.47
CCND3-202ENST00000372988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.67■■■■□ 3.46
CCND3-202ENST00000372988 CCER1Q8TC90 406 aaPredicted RBP36.62■■■■□ 3.45
CCND3-202ENST00000372988 MYT1Q01538 1121 aa36.52■■■■□ 3.44
CCND3-202ENST00000372988 CENPBP07199 599 aaPredicted RBP36.51■■■■□ 3.44
CCND3-202ENST00000372988 DIEXFQ68CQ4 756 aaKnown RBP36.51■■■■□ 3.44
CCND3-202ENST00000372988 GTF3C3Q9Y5Q9 886 aa36.5■■■■□ 3.43
CCND3-202ENST00000372988 CECR2Q9BXF3 1484 aa36.45■■■■□ 3.42
CCND3-202ENST00000372988 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
CCND3-202ENST00000372988 EIF4G1Q04637 1599 aaKnown RBP36.33■■■■□ 3.41
CCND3-202ENST00000372988 WRNQ14191 1432 aaPredicted RBP eCLIP36.31■■■■□ 3.49e-6■■■■■ 50.1
CCND3-202ENST00000372988 WIZO95785 1651 aa36.29■■■■□ 3.4
CCND3-202ENST00000372988 BAZ1AQ9NRL2 1556 aaPredicted RBP36.17■■■■□ 3.38
CCND3-202ENST00000372988 NACADO15069 1562 aa36.08■■■■□ 3.37
CCND3-202ENST00000372988 ZNF316A6NFI3 1004 aaPredicted RBP36.01■■■■□ 3.35
CCND3-202ENST00000372988 CEP162Q5TB80 1403 aa36■■■■□ 3.35
CCND3-202ENST00000372988 TNIKQ9UKE5 1360 aa35.9■■■■□ 3.34
CCND3-202ENST00000372988 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
CCND3-202ENST00000372988 ABCC8Q09428 1581 aa35.83■■■■□ 3.33
CCND3-202ENST00000372988 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
CCND3-202ENST00000372988 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
CCND3-202ENST00000372988 SOGA1O94964 1423 aa35.7■■■■□ 3.31
CCND3-202ENST00000372988 EEA1Q15075 1411 aa35.68■■■■□ 3.3
CCND3-202ENST00000372988 YTHDC1Q96MU7 727 aaKnown RBP35.64■■■■□ 3.3
CCND3-202ENST00000372988 MIER1Q8N108 512 aa35.62■■■■□ 3.29
CCND3-202ENST00000372988 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
CCND3-202ENST00000372988 CSRNP3Q8WYN3 585 aa35.55■■■■□ 3.28
CCND3-202ENST00000372988 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
CCND3-202ENST00000372988 GOLGA3Q08378 1498 aa35.49■■■■□ 3.27
CCND3-202ENST00000372988 UBTFP17480 764 aaKnown RBP35.44■■■■□ 3.26
CCND3-202ENST00000372988 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
CCND3-202ENST00000372988 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
CCND3-202ENST00000372988 KIF21BO75037 1637 aa35.18■■■■□ 3.22
CCND3-202ENST00000372988 CEP164Q9UPV0 1460 aa35.17■■■■□ 3.22
CCND3-202ENST00000372988 CLSPNQ9HAW4 1339 aa35.14■■■■□ 3.22
CCND3-202ENST00000372988 VPS8Q8N3P4 1428 aa35.11■■■■□ 3.21
CCND3-202ENST00000372988 CLIP1P30622 1438 aa35.1■■■■□ 3.21
CCND3-202ENST00000372988 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
CCND3-202ENST00000372988 SUPT16HQ9Y5B9 1047 aaKnown RBP34.96■■■■□ 3.19
CCND3-202ENST00000372988 SYNJ1O43426 1573 aa34.92■■■■□ 3.18
CCND3-202ENST00000372988 APLP2Q06481 763 aa34.85■■■■□ 3.17
CCND3-202ENST00000372988 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
CCND3-202ENST00000372988 DHX57Q6P158 1386 aaKnown RBP34.84■■■■□ 3.17
CCND3-202ENST00000372988 RAPGEF2Q9Y4G8 1499 aa34.79■■■■□ 3.16
CCND3-202ENST00000372988 PEG3Q9GZU2 1588 aa34.72■■■■□ 3.15
CCND3-202ENST00000372988 TSHZ2Q9NRE2 1034 aa34.69■■■■□ 3.14
CCND3-202ENST00000372988 ANP32EQ9BTT0 268 aa34.54■■■■□ 3.12
CCND3-202ENST00000372988 CUX2O14529 1486 aa34.5■■■■□ 3.11
CCND3-202ENST00000372988 ARAP1Q96P48 1450 aa34.48■■■■□ 3.11
CCND3-202ENST00000372988 RRBP1Q9P2E9 1410 aaKnown RBP34.48■■■■□ 3.11
CCND3-202ENST00000372988 ERICH3Q5RHP9 1530 aa34.43■■■■□ 3.1
CCND3-202ENST00000372988 RANGAP1P46060 587 aaPredicted RBP34.42■■■■□ 3.1
CCND3-202ENST00000372988 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
CCND3-202ENST00000372988 KANK4Q5T7N3 995 aaPredicted RBP34.39■■■■□ 3.1
CCND3-202ENST00000372988 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
CCND3-202ENST00000372988 PRXQ9BXM0 1461 aa34.36■■■■□ 3.09
CCND3-202ENST00000372988 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
CCND3-202ENST00000372988 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
CCND3-202ENST00000372988 KCNH8Q96L42 1107 aa34.25■■■■□ 3.07
CCND3-202ENST00000372988 CCNB3Q8WWL7 1395 aa34.22■■■■□ 3.07
CCND3-202ENST00000372988 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
CCND3-202ENST00000372988 MAPKBP1O60336 1514 aa34.16■■■■□ 3.06
CCND3-202ENST00000372988 RAB3GAP2Q9H2M9 1393 aa34.06■■■■□ 3.04
CCND3-202ENST00000372988 FKBP8Q14318 412 aa34.04■■■■□ 3.04
CCND3-202ENST00000372988 BCANQ96GW7 911 aa34.04■■■■□ 3.04
CCND3-202ENST00000372988 BCL11AQ9H165 835 aa34.04■■■■□ 3.04
CCND3-202ENST00000372988 ARHGAP35Q9NRY4 1499 aa34■■■■□ 3.03
CCND3-202ENST00000372988 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
CCND3-202ENST00000372988 ITGAEP38570 1179 aa33.91■■■■□ 3.02
CCND3-202ENST00000372988 KIF27Q86VH2 1401 aa33.9■■■■□ 3.02
CCND3-202ENST00000372988 PPP1R15AO75807 674 aaPredicted RBP33.89■■■■□ 3.02
CCND3-202ENST00000372988 DDX10Q13206 875 aaKnown RBP33.89■■■■□ 3.02
CCND3-202ENST00000372988 RBM19Q9Y4C8 960 aaKnown RBP33.88■■■■□ 3.01
CCND3-202ENST00000372988 SETD5Q9C0A6 1442 aa33.88■■■■□ 3.01
CCND3-202ENST00000372988 MAP3K1Q13233 1512 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms