RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 NISCHQ9Y2I1 1504 aa46.79■■■■■ 5.08
CCND3-202ENST00000372988 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
CCND3-202ENST00000372988 SUPT5HO00267 1087 aaKnown RBP40.21■■■■■ 4.03
CCND3-202ENST00000372988 HRCP23327 699 aa40.18■■■■■ 4.02
CCND3-202ENST00000372988 MYO15BQ96JP2 1530 aa39.85■■■■□ 3.97
CCND3-202ENST00000372988 ZCCHC6Q5VYS8 1495 aaKnown RBP39.8■■■■□ 3.96
CCND3-202ENST00000372988 CHIC1Q5VXU3 224 aa39.67■■■■□ 3.94
CCND3-202ENST00000372988 PCGF6Q9BYE7 350 aa39.39■■■■□ 3.9
CCND3-202ENST00000372988 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
CCND3-202ENST00000372988 PPARGC1BQ86YN6 1023 aaKnown RBP39.14■■■■□ 3.86
CCND3-202ENST00000372988 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
CCND3-202ENST00000372988 LOC105371045A0A1W2PR82 267 aa38.51■■■■□ 3.76
CCND3-202ENST00000372988 TRIM26Q12899 539 aaPredicted RBP38.45■■■■□ 3.75
CCND3-202ENST00000372988 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
CCND3-202ENST00000372988 PELP1Q8IZL8 1130 aaKnown RBP38.11■■■■□ 3.69
CCND3-202ENST00000372988 ZEB1P37275 1124 aaPredicted RBP38.06■■■■□ 3.68
CCND3-202ENST00000372988 ABCC9O60706 1549 aa37.75■■■■□ 3.63
CCND3-202ENST00000372988 SCAF1Q9H7N4 1312 aaKnown RBP37.66■■■■□ 3.62
CCND3-202ENST00000372988 RSF1Q96T23 1441 aaPredicted RBP37.42■■■■□ 3.58
CCND3-202ENST00000372988 TRIM41Q8WV44 630 aa37.38■■■■□ 3.57
CCND3-202ENST00000372988 RB1CC1Q8TDY2 1594 aa37.18■■■■□ 3.54
CCND3-202ENST00000372988 FAM9AQ8IZU1 332 aaPredicted RBP37.1■■■■□ 3.53
CCND3-202ENST00000372988 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
CCND3-202ENST00000372988 ACIN1Q9UKV3 1341 aaKnown RBP36.95■■■■□ 3.5
CCND3-202ENST00000372988 NEUROD1Q13562 356 aa36.79■■■■□ 3.48
CCND3-202ENST00000372988 EHMT2Q96KQ7 1210 aa36.72■■■■□ 3.47
CCND3-202ENST00000372988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.67■■■■□ 3.46
CCND3-202ENST00000372988 CCER1Q8TC90 406 aaPredicted RBP36.62■■■■□ 3.45
CCND3-202ENST00000372988 MYT1Q01538 1121 aa36.52■■■■□ 3.44
CCND3-202ENST00000372988 CENPBP07199 599 aaPredicted RBP36.51■■■■□ 3.44
CCND3-202ENST00000372988 DIEXFQ68CQ4 756 aaKnown RBP36.51■■■■□ 3.44
CCND3-202ENST00000372988 GTF3C3Q9Y5Q9 886 aa36.5■■■■□ 3.43
CCND3-202ENST00000372988 CECR2Q9BXF3 1484 aa36.45■■■■□ 3.42
CCND3-202ENST00000372988 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
CCND3-202ENST00000372988 EIF4G1Q04637 1599 aaKnown RBP36.33■■■■□ 3.41
CCND3-202ENST00000372988 WRNQ14191 1432 aaPredicted RBP eCLIP36.31■■■■□ 3.49e-6■■■■■ 50.1
CCND3-202ENST00000372988 WIZO95785 1651 aa36.29■■■■□ 3.4
CCND3-202ENST00000372988 BAZ1AQ9NRL2 1556 aaPredicted RBP36.17■■■■□ 3.38
CCND3-202ENST00000372988 NACADO15069 1562 aa36.08■■■■□ 3.37
CCND3-202ENST00000372988 ZNF316A6NFI3 1004 aaPredicted RBP36.01■■■■□ 3.35
CCND3-202ENST00000372988 CEP162Q5TB80 1403 aa36■■■■□ 3.35
CCND3-202ENST00000372988 TNIKQ9UKE5 1360 aa35.9■■■■□ 3.34
CCND3-202ENST00000372988 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
CCND3-202ENST00000372988 ABCC8Q09428 1581 aa35.83■■■■□ 3.33
CCND3-202ENST00000372988 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
CCND3-202ENST00000372988 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
CCND3-202ENST00000372988 SOGA1O94964 1423 aa35.7■■■■□ 3.31
CCND3-202ENST00000372988 EEA1Q15075 1411 aa35.68■■■■□ 3.3
CCND3-202ENST00000372988 YTHDC1Q96MU7 727 aaKnown RBP35.64■■■■□ 3.3
CCND3-202ENST00000372988 MIER1Q8N108 512 aa35.62■■■■□ 3.29
CCND3-202ENST00000372988 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
CCND3-202ENST00000372988 CSRNP3Q8WYN3 585 aa35.55■■■■□ 3.28
CCND3-202ENST00000372988 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
CCND3-202ENST00000372988 GOLGA3Q08378 1498 aa35.49■■■■□ 3.27
CCND3-202ENST00000372988 UBTFP17480 764 aaKnown RBP35.44■■■■□ 3.26
CCND3-202ENST00000372988 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
CCND3-202ENST00000372988 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
CCND3-202ENST00000372988 KIF21BO75037 1637 aa35.18■■■■□ 3.22
CCND3-202ENST00000372988 CEP164Q9UPV0 1460 aa35.17■■■■□ 3.22
CCND3-202ENST00000372988 CLSPNQ9HAW4 1339 aa35.14■■■■□ 3.22
CCND3-202ENST00000372988 VPS8Q8N3P4 1428 aa35.11■■■■□ 3.21
CCND3-202ENST00000372988 CLIP1P30622 1438 aa35.1■■■■□ 3.21
CCND3-202ENST00000372988 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
CCND3-202ENST00000372988 SUPT16HQ9Y5B9 1047 aaKnown RBP34.96■■■■□ 3.19
CCND3-202ENST00000372988 SYNJ1O43426 1573 aa34.92■■■■□ 3.18
CCND3-202ENST00000372988 APLP2Q06481 763 aa34.85■■■■□ 3.17
CCND3-202ENST00000372988 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
CCND3-202ENST00000372988 DHX57Q6P158 1386 aaKnown RBP34.84■■■■□ 3.17
CCND3-202ENST00000372988 RAPGEF2Q9Y4G8 1499 aa34.79■■■■□ 3.16
CCND3-202ENST00000372988 PEG3Q9GZU2 1588 aa34.72■■■■□ 3.15
CCND3-202ENST00000372988 TSHZ2Q9NRE2 1034 aa34.69■■■■□ 3.14
CCND3-202ENST00000372988 ANP32EQ9BTT0 268 aa34.54■■■■□ 3.12
CCND3-202ENST00000372988 CUX2O14529 1486 aa34.5■■■■□ 3.11
CCND3-202ENST00000372988 ARAP1Q96P48 1450 aa34.48■■■■□ 3.11
CCND3-202ENST00000372988 RRBP1Q9P2E9 1410 aaKnown RBP34.48■■■■□ 3.11
CCND3-202ENST00000372988 ERICH3Q5RHP9 1530 aa34.43■■■■□ 3.1
CCND3-202ENST00000372988 RANGAP1P46060 587 aaPredicted RBP34.42■■■■□ 3.1
CCND3-202ENST00000372988 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
CCND3-202ENST00000372988 KANK4Q5T7N3 995 aaPredicted RBP34.39■■■■□ 3.1
CCND3-202ENST00000372988 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
CCND3-202ENST00000372988 PRXQ9BXM0 1461 aa34.36■■■■□ 3.09
CCND3-202ENST00000372988 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
CCND3-202ENST00000372988 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
CCND3-202ENST00000372988 KCNH8Q96L42 1107 aa34.25■■■■□ 3.07
CCND3-202ENST00000372988 CCNB3Q8WWL7 1395 aa34.22■■■■□ 3.07
CCND3-202ENST00000372988 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
CCND3-202ENST00000372988 MAPKBP1O60336 1514 aa34.16■■■■□ 3.06
CCND3-202ENST00000372988 RAB3GAP2Q9H2M9 1393 aa34.06■■■■□ 3.04
CCND3-202ENST00000372988 FKBP8Q14318 412 aa34.04■■■■□ 3.04
CCND3-202ENST00000372988 BCANQ96GW7 911 aa34.04■■■■□ 3.04
CCND3-202ENST00000372988 BCL11AQ9H165 835 aa34.04■■■■□ 3.04
CCND3-202ENST00000372988 ARHGAP35Q9NRY4 1499 aa34■■■■□ 3.03
CCND3-202ENST00000372988 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
CCND3-202ENST00000372988 ITGAEP38570 1179 aa33.91■■■■□ 3.02
CCND3-202ENST00000372988 KIF27Q86VH2 1401 aa33.9■■■■□ 3.02
CCND3-202ENST00000372988 PPP1R15AO75807 674 aaPredicted RBP33.89■■■■□ 3.02
CCND3-202ENST00000372988 DDX10Q13206 875 aaKnown RBP33.89■■■■□ 3.02
CCND3-202ENST00000372988 RBM19Q9Y4C8 960 aaKnown RBP33.88■■■■□ 3.01
CCND3-202ENST00000372988 SETD5Q9C0A6 1442 aa33.88■■■■□ 3.01
CCND3-202ENST00000372988 MAP3K1Q13233 1512 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms