Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00959A0A1B0GUT2 AC139426.1-201ENST00000568218 2529 ntBASIC18.17■□□□□ 0.5
LINC00959A0A1B0GUT2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LINC00959A0A1B0GUT2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00959A0A1B0GUT2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00959A0A1B0GUT2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.15■□□□□ 0.5
LINC00959A0A1B0GUT2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00959A0A1B0GUT2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LINC00959A0A1B0GUT2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00959A0A1B0GUT2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00959A0A1B0GUT2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LINC00959A0A1B0GUT2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00959A0A1B0GUT2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00959A0A1B0GUT2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LINC00959A0A1B0GUT2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00959A0A1B0GUT2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC00959A0A1B0GUT2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00959A0A1B0GUT2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00959A0A1B0GUT2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00959A0A1B0GUT2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00959A0A1B0GUT2 AL135925.1-201ENST00000605920 1701 ntBASIC18.11■□□□□ 0.49
LINC00959A0A1B0GUT2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00959A0A1B0GUT2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00959A0A1B0GUT2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00959A0A1B0GUT2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00959A0A1B0GUT2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00959A0A1B0GUT2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00959A0A1B0GUT2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LINC00959A0A1B0GUT2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00959A0A1B0GUT2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00959A0A1B0GUT2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00959A0A1B0GUT2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC00959A0A1B0GUT2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC00959A0A1B0GUT2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LINC00959A0A1B0GUT2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LINC00959A0A1B0GUT2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00959A0A1B0GUT2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00959A0A1B0GUT2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00959A0A1B0GUT2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00959A0A1B0GUT2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00959A0A1B0GUT2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00959A0A1B0GUT2 WASH5P-204ENST00000632292 975 ntBASIC18.04■□□□□ 0.48
LINC00959A0A1B0GUT2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00959A0A1B0GUT2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00959A0A1B0GUT2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC00959A0A1B0GUT2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00959A0A1B0GUT2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LINC00959A0A1B0GUT2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00959A0A1B0GUT2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00959A0A1B0GUT2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC00959A0A1B0GUT2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18■□□□□ 0.47
LINC00959A0A1B0GUT2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00959A0A1B0GUT2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LINC00959A0A1B0GUT2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00959A0A1B0GUT2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00959A0A1B0GUT2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.99■□□□□ 0.47
LINC00959A0A1B0GUT2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC00959A0A1B0GUT2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00959A0A1B0GUT2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00959A0A1B0GUT2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC00959A0A1B0GUT2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00959A0A1B0GUT2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC00959A0A1B0GUT2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00959A0A1B0GUT2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC00959A0A1B0GUT2 AL133380.1-201ENST00000506013 324 ntBASIC17.97■□□□□ 0.47
LINC00959A0A1B0GUT2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC00959A0A1B0GUT2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00959A0A1B0GUT2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00959A0A1B0GUT2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC00959A0A1B0GUT2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00959A0A1B0GUT2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00959A0A1B0GUT2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00959A0A1B0GUT2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00959A0A1B0GUT2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00959A0A1B0GUT2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00959A0A1B0GUT2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00959A0A1B0GUT2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00959A0A1B0GUT2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00959A0A1B0GUT2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00959A0A1B0GUT2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00959A0A1B0GUT2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00959A0A1B0GUT2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00959A0A1B0GUT2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00959A0A1B0GUT2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LINC00959A0A1B0GUT2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00959A0A1B0GUT2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LINC00959A0A1B0GUT2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LINC00959A0A1B0GUT2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00959A0A1B0GUT2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00959A0A1B0GUT2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LINC00959A0A1B0GUT2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00959A0A1B0GUT2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00959A0A1B0GUT2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00959A0A1B0GUT2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00959A0A1B0GUT2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00959A0A1B0GUT2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LINC00959A0A1B0GUT2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00959A0A1B0GUT2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00959A0A1B0GUT2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00959A0A1B0GUT2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms