Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LINC00959A0A1B0GUT2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
LINC00959A0A1B0GUT2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.51■■□□□ 1.19
LINC00959A0A1B0GUT2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LINC00959A0A1B0GUT2 AL356512.1-201ENST00000607453 1739 ntBASIC22.39■■□□□ 1.17
LINC00959A0A1B0GUT2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.39■■□□□ 1.17
LINC00959A0A1B0GUT2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
LINC00959A0A1B0GUT2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
LINC00959A0A1B0GUT2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.14■■□□□ 1.14
LINC00959A0A1B0GUT2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00959A0A1B0GUT2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00959A0A1B0GUT2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00959A0A1B0GUT2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00959A0A1B0GUT2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00959A0A1B0GUT2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.55■■□□□ 1.04
LINC00959A0A1B0GUT2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
LINC00959A0A1B0GUT2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00959A0A1B0GUT2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00959A0A1B0GUT2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LINC00959A0A1B0GUT2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LINC00959A0A1B0GUT2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.27■■□□□ 1
LINC00959A0A1B0GUT2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LINC00959A0A1B0GUT2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21.23■□□□□ 0.99
LINC00959A0A1B0GUT2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00959A0A1B0GUT2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00959A0A1B0GUT2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00959A0A1B0GUT2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00959A0A1B0GUT2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LINC00959A0A1B0GUT2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00959A0A1B0GUT2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LINC00959A0A1B0GUT2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00959A0A1B0GUT2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
LINC00959A0A1B0GUT2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LINC00959A0A1B0GUT2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00959A0A1B0GUT2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00959A0A1B0GUT2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.73■□□□□ 0.91
LINC00959A0A1B0GUT2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LINC00959A0A1B0GUT2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00959A0A1B0GUT2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00959A0A1B0GUT2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
LINC00959A0A1B0GUT2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00959A0A1B0GUT2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.55■□□□□ 0.88
LINC00959A0A1B0GUT2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00959A0A1B0GUT2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00959A0A1B0GUT2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LINC00959A0A1B0GUT2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC00959A0A1B0GUT2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00959A0A1B0GUT2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.35■□□□□ 0.85
LINC00959A0A1B0GUT2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LINC00959A0A1B0GUT2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00959A0A1B0GUT2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00959A0A1B0GUT2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00959A0A1B0GUT2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.29■□□□□ 0.84
LINC00959A0A1B0GUT2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00959A0A1B0GUT2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00959A0A1B0GUT2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00959A0A1B0GUT2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00959A0A1B0GUT2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00959A0A1B0GUT2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LINC00959A0A1B0GUT2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00959A0A1B0GUT2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00959A0A1B0GUT2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LINC00959A0A1B0GUT2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LINC00959A0A1B0GUT2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC00959A0A1B0GUT2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00959A0A1B0GUT2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LINC00959A0A1B0GUT2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.96■□□□□ 0.79
LINC00959A0A1B0GUT2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC00959A0A1B0GUT2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINC00959A0A1B0GUT2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00959A0A1B0GUT2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC00959A0A1B0GUT2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LINC00959A0A1B0GUT2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00959A0A1B0GUT2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00959A0A1B0GUT2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00959A0A1B0GUT2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00959A0A1B0GUT2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00959A0A1B0GUT2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00959A0A1B0GUT2 AC145285.7-201ENST00000614819 1539 ntBASIC19.77■□□□□ 0.76
LINC00959A0A1B0GUT2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00959A0A1B0GUT2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LINC00959A0A1B0GUT2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00959A0A1B0GUT2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00959A0A1B0GUT2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00959A0A1B0GUT2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC00959A0A1B0GUT2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
LINC00959A0A1B0GUT2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.7■□□□□ 0.74
LINC00959A0A1B0GUT2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LINC00959A0A1B0GUT2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00959A0A1B0GUT2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00959A0A1B0GUT2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00959A0A1B0GUT2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00959A0A1B0GUT2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LINC00959A0A1B0GUT2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC00959A0A1B0GUT2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINC00959A0A1B0GUT2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LINC00959A0A1B0GUT2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00959A0A1B0GUT2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LINC00959A0A1B0GUT2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00959A0A1B0GUT2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms