RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 NISCHQ9Y2I1 1504 aa56.6■■■■■ 6.65
SHARPIN-202ENST00000398712 CCDC180Q9P1Z9 1646 aa49.03■■■■■ 5.44
SHARPIN-202ENST00000398712 ZCCHC6Q5VYS8 1495 aaKnown RBP47.69■■■■■ 5.23
SHARPIN-202ENST00000398712 DCAF1Q9Y4B6 1507 aa46.78■■■■■ 5.08
SHARPIN-202ENST00000398712 SHROOM4Q9ULL8 1493 aa46.72■■■■■ 5.07
SHARPIN-202ENST00000398712 DCAF8L2P0C7V8 631 aa46.55■■■■■ 5.04
SHARPIN-202ENST00000398712 MYO15BQ96JP2 1530 aa45.95■■■■■ 4.95
SHARPIN-202ENST00000398712 ABCC9O60706 1549 aa45.78■■■■■ 4.92
SHARPIN-202ENST00000398712 NACADO15069 1562 aa45.48■■■■■ 4.87
SHARPIN-202ENST00000398712 SUPT5HO00267 1087 aaKnown RBP45.33■■■■■ 4.85
SHARPIN-202ENST00000398712 SCRIBQ14160 1630 aa45.22■■■■■ 4.83
SHARPIN-202ENST00000398712 RB1CC1Q8TDY2 1594 aa44.94■■■■■ 4.78
SHARPIN-202ENST00000398712 RSF1Q96T23 1441 aaPredicted RBP44.19■■■■■ 4.66
SHARPIN-202ENST00000398712 UNC13AQ9UPW8 1703 aa44.09■■■■■ 4.65
SHARPIN-202ENST00000398712 CECR2Q9BXF3 1484 aa43.91■■■■■ 4.62
SHARPIN-202ENST00000398712 MROH2BQ7Z745 1585 aa43.76■■■■■ 4.6
SHARPIN-202ENST00000398712 CHIC1Q5VXU3 224 aa43.75■■■■■ 4.59
SHARPIN-202ENST00000398712 BAZ1AQ9NRL2 1556 aaPredicted RBP43.66■■■■■ 4.58
SHARPIN-202ENST00000398712 BICRAQ9NZM4 1560 aa43.54■■■■■ 4.56
SHARPIN-202ENST00000398712 WIZO95785 1651 aa43.47■■■■■ 4.55
SHARPIN-202ENST00000398712 SMARCA4P51532 1647 aa43.37■■■■■ 4.53
SHARPIN-202ENST00000398712 PABPN1Q86U42 306 aaKnown RBP eCLIP43.25■■■■■ 4.51
SHARPIN-202ENST00000398712 TOP2AP11388 1531 aaKnown RBP43.02■■■■■ 4.48
SHARPIN-202ENST00000398712 PEG3Q9GZU2 1588 aa42.79■■■■■ 4.44
SHARPIN-202ENST00000398712 SMARCA2P51531 1590 aa42.64■■■■■ 4.42
SHARPIN-202ENST00000398712 CCDC88BA6NC98 1476 aa42.59■■■■■ 4.41
SHARPIN-202ENST00000398712 EIF4G1Q04637 1599 aaKnown RBP42.58■■■■■ 4.41
SHARPIN-202ENST00000398712 TRIM41Q8WV44 630 aa42.57■■■■■ 4.4
SHARPIN-202ENST00000398712 ATAD2BQ9ULI0 1458 aa42.45■■■■■ 4.39
SHARPIN-202ENST00000398712 BAZ1BQ9UIG0 1483 aaKnown RBP42.29■■■■■ 4.36
SHARPIN-202ENST00000398712 LOC105371045A0A1W2PR82 267 aa42.11■■■■■ 4.33
SHARPIN-202ENST00000398712 HMGXB3Q12766 1538 aa41.98■■■■■ 4.31
SHARPIN-202ENST00000398712 ABCC8Q09428 1581 aa41.95■■■■■ 4.31
SHARPIN-202ENST00000398712 NCAPD3P42695 1498 aa41.95■■■■■ 4.31
SHARPIN-202ENST00000398712 FAM9AQ8IZU1 332 aaPredicted RBP41.81■■■■■ 4.28
SHARPIN-202ENST00000398712 DNAJC5BQ9UF47 199 aa41.66■■■■■ 4.26
SHARPIN-202ENST00000398712 WRNQ14191 1432 aaPredicted RBP eCLIP41.59■■■■■ 4.25
SHARPIN-202ENST00000398712 CC2D2AQ9P2K1 1620 aa41.49■■■■■ 4.23
SHARPIN-202ENST00000398712 EEA1Q15075 1411 aa41.4■■■■■ 4.22
SHARPIN-202ENST00000398712 SYNJ1O43426 1573 aa41.39■■■■■ 4.22
SHARPIN-202ENST00000398712 SOGA1O94964 1423 aa41.3■■■■■ 4.2
SHARPIN-202ENST00000398712 CFTRP13569 1480 aa41.23■■■■■ 4.19
SHARPIN-202ENST00000398712 EHMT2Q96KQ7 1210 aa41.21■■■■■ 4.19
SHARPIN-202ENST00000398712 TOP2BQ02880 1626 aa41.17■■■■■ 4.18
SHARPIN-202ENST00000398712 PRDM2Q13029 1718 aa41.15■■■■■ 4.18
SHARPIN-202ENST00000398712 BIVM-ERCC5R4GMW8 1640 aa41.13■■■■■ 4.17
SHARPIN-202ENST00000398712 RUSC2Q8N2Y8 1516 aa41.09■■■■■ 4.17
SHARPIN-202ENST00000398712 CSRNP3Q8WYN3 585 aa41.08■■■■■ 4.17
SHARPIN-202ENST00000398712 PCGF6Q9BYE7 350 aa40.99■■■■■ 4.15
SHARPIN-202ENST00000398712 CADPSQ9ULU8 1353 aa40.94■■■■■ 4.14
SHARPIN-202ENST00000398712 CUX1P39880 1505 aa40.87■■■■■ 4.13
SHARPIN-202ENST00000398712 TNIKQ9UKE5 1360 aa40.86■■■■■ 4.13
SHARPIN-202ENST00000398712 GOLGA3Q08378 1498 aa40.86■■■■■ 4.13
SHARPIN-202ENST00000398712 KIF21BO75037 1637 aa40.83■■■■■ 4.13
SHARPIN-202ENST00000398712 TRIM26Q12899 539 aaPredicted RBP40.81■■■■■ 4.12
SHARPIN-202ENST00000398712 CEP164Q9UPV0 1460 aa40.79■■■■■ 4.12
SHARPIN-202ENST00000398712 CEP162Q5TB80 1403 aa40.71■■■■■ 4.11
SHARPIN-202ENST00000398712 UBTFP17480 764 aaKnown RBP40.66■■■■■ 4.1
SHARPIN-202ENST00000398712 FANCD2Q9BXW9 1451 aa40.51■■■■■ 4.08
SHARPIN-202ENST00000398712 KIF27Q86VH2 1401 aa40.48■■■■■ 4.07
SHARPIN-202ENST00000398712 LAMC3Q9Y6N6 1575 aa40.44■■■■■ 4.06
SHARPIN-202ENST00000398712 RAPGEF2Q9Y4G8 1499 aa40.43■■■■■ 4.06
SHARPIN-202ENST00000398712 HRCP23327 699 aa40.41■■■■■ 4.06
SHARPIN-202ENST00000398712 ERICH3Q5RHP9 1530 aa40.41■■■■■ 4.06
SHARPIN-202ENST00000398712 PRXQ9BXM0 1461 aa40.37■■■■■ 4.05
SHARPIN-202ENST00000398712 NESP48681 1621 aa40.35■■■■■ 4.05
SHARPIN-202ENST00000398712 FGD5Q6ZNL6 1462 aa40.32■■■■■ 4.05
SHARPIN-202ENST00000398712 DNMBPQ6XZF7 1577 aa40.3■■■■■ 4.04
SHARPIN-202ENST00000398712 CLIP1P30622 1438 aa40.23■■■■■ 4.03
SHARPIN-202ENST00000398712 CUX2O14529 1486 aa40.21■■■■■ 4.03
SHARPIN-202ENST00000398712 TOPBP1Q92547 1522 aa40.16■■■■■ 4.02
SHARPIN-202ENST00000398712 PDS5BQ9NTI5 1447 aa40.1■■■■■ 4.01
SHARPIN-202ENST00000398712 PPARGC1BQ86YN6 1023 aaKnown RBP40.09■■■■■ 4.01
SHARPIN-202ENST00000398712 POLA1P09884 1462 aaPredicted RBP40.01■■■■■ 4
SHARPIN-202ENST00000398712 IGF1RP08069 1367 aa40.01■■■■■ 4
SHARPIN-202ENST00000398712 VPS8Q8N3P4 1428 aa39.98■■■■□ 3.99
SHARPIN-202ENST00000398712 ABCA10Q8WWZ4 1543 aa39.98■■■■□ 3.99
SHARPIN-202ENST00000398712 URB2Q14146 1524 aaKnown RBP39.96■■■■□ 3.99
SHARPIN-202ENST00000398712 KIF21AQ7Z4S6 1674 aa39.91■■■■□ 3.98
SHARPIN-202ENST00000398712 RAD54L2Q9Y4B4 1467 aa39.89■■■■□ 3.98
SHARPIN-202ENST00000398712 CARMIL1Q5VZK9 1371 aa39.85■■■■□ 3.97
SHARPIN-202ENST00000398712 WDR97A6NE52 1622 aa39.8■■■■□ 3.96
SHARPIN-202ENST00000398712 RANGAP1P46060 587 aaPredicted RBP39.77■■■■□ 3.96
SHARPIN-202ENST00000398712 ARAP1Q96P48 1450 aa39.73■■■■□ 3.95
SHARPIN-202ENST00000398712 CUL7Q14999 1698 aa39.7■■■■□ 3.95
SHARPIN-202ENST00000398712 APLP2Q06481 763 aa39.65■■■■□ 3.94
SHARPIN-202ENST00000398712 TTBK1Q5TCY1 1321 aaPredicted RBP39.65■■■■□ 3.94
SHARPIN-202ENST00000398712 ABCA5Q8WWZ7 1642 aa39.6■■■■□ 3.93
SHARPIN-202ENST00000398712 ZEB1P37275 1124 aaPredicted RBP39.59■■■■□ 3.93
SHARPIN-202ENST00000398712 ARHGAP35Q9NRY4 1499 aa39.58■■■■□ 3.93
SHARPIN-202ENST00000398712 MRC2Q9UBG0 1479 aa39.55■■■■□ 3.92
SHARPIN-202ENST00000398712 TARBP1Q13395 1621 aaKnown RBP39.5■■■■□ 3.91
SHARPIN-202ENST00000398712 GAPVD1Q14C86 1478 aa39.48■■■■□ 3.91
SHARPIN-202ENST00000398712 TDRD9Q8NDG6 1382 aaKnown RBP39.44■■■■□ 3.9
SHARPIN-202ENST00000398712 CTTNBP2Q8WZ74 1663 aa39.38■■■■□ 3.9
SHARPIN-202ENST00000398712 ERCC6Q03468 1493 aa39.34■■■■□ 3.89
SHARPIN-202ENST00000398712 WDR62O43379 1518 aa39.3■■■■□ 3.88
SHARPIN-202ENST00000398712 EFCAB5A4FU69 1503 aa39.26■■■■□ 3.88
SHARPIN-202ENST00000398712 PBRM1Q86U86 1689 aa39.24■■■■□ 3.87
SHARPIN-202ENST00000398712 IFT140Q96RY7 1462 aa39.18■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms