Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIC4Q9Y696 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLIC4Q9Y696 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CLIC4Q9Y696 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.15■■■□□ 2.58
CLIC4Q9Y696 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CLIC4Q9Y696 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLIC4Q9Y696 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLIC4Q9Y696 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIC4Q9Y696 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.12■■■□□ 2.57
CLIC4Q9Y696 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.12■■■□□ 2.57
CLIC4Q9Y696 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.09■■■□□ 2.57
CLIC4Q9Y696 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLIC4Q9Y696 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.06■■■□□ 2.56
CLIC4Q9Y696 ABCB10P1-201ENST00000614297 2181 ntBASIC31.06■■■□□ 2.56
CLIC4Q9Y696 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLIC4Q9Y696 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
CLIC4Q9Y696 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CLIC4Q9Y696 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31■■■□□ 2.55
CLIC4Q9Y696 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31■■■□□ 2.55
CLIC4Q9Y696 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLIC4Q9Y696 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CLIC4Q9Y696 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CLIC4Q9Y696 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLIC4Q9Y696 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.93■■■□□ 2.54
CLIC4Q9Y696 AL161658.1-201ENST00000623641 1967 ntBASIC30.92■■■□□ 2.54
CLIC4Q9Y696 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLIC4Q9Y696 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLIC4Q9Y696 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CLIC4Q9Y696 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CLIC4Q9Y696 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.91■■■□□ 2.54
CLIC4Q9Y696 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLIC4Q9Y696 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLIC4Q9Y696 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLIC4Q9Y696 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLIC4Q9Y696 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.87■■■□□ 2.53
CLIC4Q9Y696 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLIC4Q9Y696 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CLIC4Q9Y696 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLIC4Q9Y696 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
CLIC4Q9Y696 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLIC4Q9Y696 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.81■■■□□ 2.52
CLIC4Q9Y696 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
CLIC4Q9Y696 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLIC4Q9Y696 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLIC4Q9Y696 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CLIC4Q9Y696 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CLIC4Q9Y696 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CLIC4Q9Y696 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CLIC4Q9Y696 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
CLIC4Q9Y696 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CLIC4Q9Y696 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.78■■■□□ 2.52
CLIC4Q9Y696 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.77■■■□□ 2.52
CLIC4Q9Y696 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.77■■■□□ 2.52
CLIC4Q9Y696 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CLIC4Q9Y696 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
CLIC4Q9Y696 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLIC4Q9Y696 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLIC4Q9Y696 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.74■■■□□ 2.51
CLIC4Q9Y696 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLIC4Q9Y696 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLIC4Q9Y696 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLIC4Q9Y696 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CLIC4Q9Y696 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.72■■■□□ 2.51
CLIC4Q9Y696 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.72■■■□□ 2.51
CLIC4Q9Y696 AL133380.1-201ENST00000506013 324 ntBASIC30.71■■■□□ 2.51
CLIC4Q9Y696 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CLIC4Q9Y696 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.7■■■□□ 2.51
CLIC4Q9Y696 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLIC4Q9Y696 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIC4Q9Y696 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.69■■■□□ 2.5
CLIC4Q9Y696 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CLIC4Q9Y696 ABCB10P3-201ENST00000561950 2166 ntBASIC30.67■■■□□ 2.5
CLIC4Q9Y696 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CLIC4Q9Y696 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CLIC4Q9Y696 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CLIC4Q9Y696 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CLIC4Q9Y696 ST7-AS1-201ENST00000456775 1889 ntBASIC30.65■■■□□ 2.5
CLIC4Q9Y696 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.65■■■□□ 2.5
CLIC4Q9Y696 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CLIC4Q9Y696 WASH5P-204ENST00000632292 975 ntBASIC30.65■■■□□ 2.5
CLIC4Q9Y696 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CLIC4Q9Y696 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLIC4Q9Y696 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLIC4Q9Y696 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CLIC4Q9Y696 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CLIC4Q9Y696 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CLIC4Q9Y696 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.62■■■□□ 2.49
CLIC4Q9Y696 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CLIC4Q9Y696 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CLIC4Q9Y696 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CLIC4Q9Y696 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CLIC4Q9Y696 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CLIC4Q9Y696 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CLIC4Q9Y696 AC139426.1-201ENST00000568218 2529 ntBASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms