Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF18Q9Y5U5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFRSF18Q9Y5U5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF18Q9Y5U5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TNFRSF18Q9Y5U5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TNFRSF18Q9Y5U5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF18Q9Y5U5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF18Q9Y5U5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF18Q9Y5U5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TNFRSF18Q9Y5U5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFRSF18Q9Y5U5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF18Q9Y5U5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF18Q9Y5U5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF18Q9Y5U5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF18Q9Y5U5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.44■□□□□ 0.7
TNFRSF18Q9Y5U5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFRSF18Q9Y5U5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF18Q9Y5U5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF18Q9Y5U5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF18Q9Y5U5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF18Q9Y5U5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF18Q9Y5U5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNFRSF18Q9Y5U5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF18Q9Y5U5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF18Q9Y5U5 AL031258.1-201ENST00000623562 325 ntBASIC19.4■□□□□ 0.7
TNFRSF18Q9Y5U5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF18Q9Y5U5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF18Q9Y5U5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF18Q9Y5U5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF18Q9Y5U5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF18Q9Y5U5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF18Q9Y5U5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF18Q9Y5U5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF18Q9Y5U5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF18Q9Y5U5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF18Q9Y5U5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF18Q9Y5U5 ABCB10P1-201ENST00000614297 2181 ntBASIC19.34■□□□□ 0.69
TNFRSF18Q9Y5U5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF18Q9Y5U5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF18Q9Y5U5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.33■□□□□ 0.69
TNFRSF18Q9Y5U5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.33■□□□□ 0.69
TNFRSF18Q9Y5U5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
TNFRSF18Q9Y5U5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFRSF18Q9Y5U5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.33■□□□□ 0.68
TNFRSF18Q9Y5U5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF18Q9Y5U5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF18Q9Y5U5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF18Q9Y5U5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF18Q9Y5U5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF18Q9Y5U5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF18Q9Y5U5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF18Q9Y5U5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF18Q9Y5U5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF18Q9Y5U5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFRSF18Q9Y5U5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF18Q9Y5U5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.27■□□□□ 0.67
TNFRSF18Q9Y5U5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF18Q9Y5U5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF18Q9Y5U5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF18Q9Y5U5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF18Q9Y5U5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF18Q9Y5U5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFRSF18Q9Y5U5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF18Q9Y5U5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF18Q9Y5U5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF18Q9Y5U5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF18Q9Y5U5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TNFRSF18Q9Y5U5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF18Q9Y5U5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF18Q9Y5U5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF18Q9Y5U5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFRSF18Q9Y5U5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TNFRSF18Q9Y5U5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF18Q9Y5U5 ABCB10P3-201ENST00000561950 2166 ntBASIC19.19■□□□□ 0.66
TNFRSF18Q9Y5U5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF18Q9Y5U5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF18Q9Y5U5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFRSF18Q9Y5U5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TNFRSF18Q9Y5U5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF18Q9Y5U5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF18Q9Y5U5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF18Q9Y5U5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF18Q9Y5U5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF18Q9Y5U5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF18Q9Y5U5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF18Q9Y5U5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF18Q9Y5U5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF18Q9Y5U5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF18Q9Y5U5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF18Q9Y5U5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF18Q9Y5U5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF18Q9Y5U5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF18Q9Y5U5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms