RNA–Protein interactions for RNA: ENST00000261590.12

DSG2-201, Transcript of desmoglein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG2, Length 5,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG2-201ENST00000261590 DCAF8L2P0C7V8 631 aa37.46■■■■□ 3.59
DSG2-201ENST00000261590 PELP1Q8IZL8 1130 aaKnown RBP36.31■■■■□ 3.4
DSG2-201ENST00000261590 SUPT5HO00267 1087 aaKnown RBP35.76■■■■□ 3.31
DSG2-201ENST00000261590 EHMT2Q96KQ7 1210 aa35.27■■■■□ 3.24
DSG2-201ENST00000261590 ERICH6Q7L0X2 663 aa34.98■■■■□ 3.19
DSG2-201ENST00000261590 APLP2Q06481 763 aa34.8■■■■□ 3.16
DSG2-201ENST00000261590 CCER1Q8TC90 406 aaPredicted RBP34.65■■■■□ 3.14
DSG2-201ENST00000261590 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
DSG2-201ENST00000261590 CENPBP07199 599 aaPredicted RBP34.42■■■■□ 3.1
DSG2-201ENST00000261590 TTBK1Q5TCY1 1321 aaPredicted RBP34.21■■■■□ 3.07
DSG2-201ENST00000261590 PCGF6Q9BYE7 350 aa34.12■■■■□ 3.05
DSG2-201ENST00000261590 MYT1Q01538 1121 aa34.06■■■■□ 3.04
DSG2-201ENST00000261590 FAM9AQ8IZU1 332 aaPredicted RBP34.03■■■■□ 3.04
DSG2-201ENST00000261590 NEFLP07196 543 aa33.83■■■■□ 3.01
DSG2-201ENST00000261590 ZEB1P37275 1124 aaPredicted RBP33.78■■■■□ 3
DSG2-201ENST00000261590 YTHDC1Q96MU7 727 aaKnown RBP33.57■■■□□ 2.96
DSG2-201ENST00000261590 RANGAP1P46060 587 aaPredicted RBP33.54■■■□□ 2.96
DSG2-201ENST00000261590 ATP1B4Q9UN42 357 aaPredicted RBP33.36■■■□□ 2.93
DSG2-201ENST00000261590 DAXXQ9UER7 740 aaPredicted RBP33.21■■■□□ 2.91
DSG2-201ENST00000261590 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
DSG2-201ENST00000261590 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
DSG2-201ENST00000261590 UBTFP17480 764 aaKnown RBP32.88■■■□□ 2.85
DSG2-201ENST00000261590 POLR3GLQ9BT43 218 aa32.55■■■□□ 2.8
DSG2-201ENST00000261590 PPARGC1BQ86YN6 1023 aaKnown RBP32.5■■■□□ 2.79
DSG2-201ENST00000261590 RTL5Q5HYW3 569 aaPredicted RBP32.47■■■□□ 2.79
DSG2-201ENST00000261590 ZNF316A6NFI3 1004 aaPredicted RBP32.37■■■□□ 2.77
DSG2-201ENST00000261590 HRCP23327 699 aa32.28■■■□□ 2.76
DSG2-201ENST00000261590 CNGB1Q14028 1251 aaPredicted RBP32.27■■■□□ 2.76
DSG2-201ENST00000261590 TRIM26Q12899 539 aaPredicted RBP32.26■■■□□ 2.75
DSG2-201ENST00000261590 MYT1LQ9UL68 1186 aa32.2■■■□□ 2.75
DSG2-201ENST00000261590 CLSPNQ9HAW4 1339 aa32.2■■■□□ 2.74
DSG2-201ENST00000261590 ITGAEP38570 1179 aa32.19■■■□□ 2.74
DSG2-201ENST00000261590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.96■■■□□ 2.71
DSG2-201ENST00000261590 HNRNPUL2Q1KMD3 747 aaKnown RBP31.96■■■□□ 2.71
DSG2-201ENST00000261590 SLC4A1APQ9BWU0 796 aaKnown RBP31.95■■■□□ 2.7
DSG2-201ENST00000261590 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
DSG2-201ENST00000261590 DIEXFQ68CQ4 756 aaKnown RBP31.64■■■□□ 2.66
DSG2-201ENST00000261590 BCANQ96GW7 911 aa31.56■■■□□ 2.64
DSG2-201ENST00000261590 ZBTB47Q9UFB7 747 aaPredicted RBP31.44■■■□□ 2.62
DSG2-201ENST00000261590 CDK11AQ9UQ88 783 aaPredicted RBP31.44■■■□□ 2.62
DSG2-201ENST00000261590 LOC105371045A0A1W2PR82 267 aa31.37■■■□□ 2.61
DSG2-201ENST00000261590 GTF3C3Q9Y5Q9 886 aa31.31■■■□□ 2.6
DSG2-201ENST00000261590 BCL11AQ9H165 835 aa31.18■■■□□ 2.58
DSG2-201ENST00000261590 TRIM52Q96A61 297 aa31.15■■■□□ 2.58
DSG2-201ENST00000261590 FAM50AQ14320 339 aaKnown RBP31.13■■■□□ 2.57
DSG2-201ENST00000261590 ANP32CO43423 234 aa31.13■■■□□ 2.57
DSG2-201ENST00000261590 NEUROD1Q13562 356 aa31.11■■■□□ 2.57
DSG2-201ENST00000261590 CANXP27824 592 aaKnown RBP31.11■■■□□ 2.57
DSG2-201ENST00000261590 EIF5BO60841 1220 aaKnown RBP31.1■■■□□ 2.57
DSG2-201ENST00000261590 ANP32AP39687 249 aaKnown RBP31.02■■■□□ 2.56
DSG2-201ENST00000261590 SLC24A1O60721 1099 aa31■■■□□ 2.55
DSG2-201ENST00000261590 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
DSG2-201ENST00000261590 ANP32BQ92688 251 aaKnown RBP30.89■■■□□ 2.54
DSG2-201ENST00000261590 NPM2Q86SE8 214 aaKnown RBP30.88■■■□□ 2.53
DSG2-201ENST00000261590 NEFMP07197 916 aa30.78■■■□□ 2.52
DSG2-201ENST00000261590 GLIPR1L2Q4G1C9 344 aa30.78■■■□□ 2.52
DSG2-201ENST00000261590 HSP90AA1P07900 732 aaKnown RBP30.64■■■□□ 2.5
DSG2-201ENST00000261590 ACIN1Q9UKV3 1341 aaKnown RBP30.59■■■□□ 2.49
DSG2-201ENST00000261590 UPF2Q9HAU5 1272 aaKnown RBP30.45■■■□□ 2.46
DSG2-201ENST00000261590 FKBP8Q14318 412 aa30.38■■■□□ 2.45
DSG2-201ENST00000261590 ARXQ96QS3 562 aa30.28■■■□□ 2.44
DSG2-201ENST00000261590 NBR1Q14596 966 aa30.28■■■□□ 2.44
DSG2-201ENST00000261590 HNRNPUQ00839 825 aaKnown RBP eCLIP30.11■■■□□ 2.41
DSG2-201ENST00000261590 CCDC136Q96JN2 1154 aa30.03■■■□□ 2.4
DSG2-201ENST00000261590 CDK11BP21127 795 aaKnown RBP30.02■■■□□ 2.4
DSG2-201ENST00000261590 FAM9BQ8IZU0 186 aa30.02■■■□□ 2.4
DSG2-201ENST00000261590 FBLN2P98095 1184 aa30.01■■■□□ 2.39
DSG2-201ENST00000261590 GOLGA6L2Q8N9W4 650 aaPredicted RBP30■■■□□ 2.39
DSG2-201ENST00000261590 SALL2Q9Y467 1007 aaPredicted RBP29.99■■■□□ 2.39
DSG2-201ENST00000261590 ARID3CA6NKF2 412 aa29.94■■■□□ 2.38
DSG2-201ENST00000261590 ZNF777Q9ULD5 760 aaPredicted RBP29.91■■■□□ 2.38
DSG2-201ENST00000261590 P3H3Q8IVL6 736 aa29.85■■■□□ 2.37
DSG2-201ENST00000261590 TONSLQ96HA7 1378 aa29.83■■■□□ 2.37
DSG2-201ENST00000261590 DDX10Q13206 875 aaKnown RBP29.81■■■□□ 2.36
DSG2-201ENST00000261590 TRIM44Q96DX7 344 aaPredicted RBP29.81■■■□□ 2.36
DSG2-201ENST00000261590 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
DSG2-201ENST00000261590 TNNT2P45379 298 aaPredicted RBP29.77■■■□□ 2.36
DSG2-201ENST00000261590 TMC1Q8TDI8 760 aa29.76■■■□□ 2.35
DSG2-201ENST00000261590 ESF1Q9H501 851 aaKnown RBP29.75■■■□□ 2.35
DSG2-201ENST00000261590 STAG3Q9UJ98 1225 aa29.74■■■□□ 2.35
DSG2-201ENST00000261590 NCLP19338 710 aaKnown RBP29.7■■■□□ 2.35
DSG2-201ENST00000261590 WDR43Q15061 677 aaKnown RBP eCLIP29.7■■■□□ 2.357e-6■■■■■ 27.3
DSG2-201ENST00000261590 MYH16Q9H6N6 1097 aa29.69■■■□□ 2.34
DSG2-201ENST00000261590 BECN1Q14457 450 aa29.63■■■□□ 2.33
DSG2-201ENST00000261590 IRX6P78412 446 aaPredicted RBP29.62■■■□□ 2.33
DSG2-201ENST00000261590 DDRGK1Q96HY6 314 aa29.62■■■□□ 2.33
DSG2-201ENST00000261590 ANP32EQ9BTT0 268 aa29.61■■■□□ 2.33
DSG2-201ENST00000261590 GOLGA6L22H0YM25 854 aa29.59■■■□□ 2.33
DSG2-201ENST00000261590 MRS2Q9HD23 443 aa29.58■■■□□ 2.33
DSG2-201ENST00000261590 PTMAP06454 111 aaKnown RBP29.56■■■□□ 2.32
DSG2-201ENST00000261590 PLPPR3Q6T4P5 718 aa29.52■■■□□ 2.32
DSG2-201ENST00000261590 DNTTIP2Q5QJE6 756 aaKnown RBP29.5■■■□□ 2.31
DSG2-201ENST00000261590 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
DSG2-201ENST00000261590 ZRSR1Q15695 479 aaKnown RBP29.46■■■□□ 2.31
DSG2-201ENST00000261590 CSRNP3Q8WYN3 585 aa29.43■■■□□ 2.3
DSG2-201ENST00000261590 NAP1L5Q96NT1 182 aaPredicted RBP29.39■■■□□ 2.29
DSG2-201ENST00000261590 ERICH6BQ5W0A0 696 aa29.38■■■□□ 2.29
DSG2-201ENST00000261590 A0A0G2JS52 829 aa29.36■■■□□ 2.29
DSG2-201ENST00000261590 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
DSG2-201ENST00000261590 TPRNQ4KMQ1 711 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms