Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FAM90A16PA6NEW6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
FAM90A16PA6NEW6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
FAM90A16PA6NEW6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
FAM90A16PA6NEW6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
FAM90A16PA6NEW6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FAM90A16PA6NEW6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FAM90A16PA6NEW6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
FAM90A16PA6NEW6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
FAM90A16PA6NEW6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FAM90A16PA6NEW6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FAM90A16PA6NEW6 ABCB10P1-201ENST00000614297 2181 ntBASIC22.84■■□□□ 1.25
FAM90A16PA6NEW6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
FAM90A16PA6NEW6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.83■■□□□ 1.25
FAM90A16PA6NEW6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FAM90A16PA6NEW6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
FAM90A16PA6NEW6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
FAM90A16PA6NEW6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
FAM90A16PA6NEW6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.81■■□□□ 1.24
FAM90A16PA6NEW6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FAM90A16PA6NEW6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FAM90A16PA6NEW6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
FAM90A16PA6NEW6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
FAM90A16PA6NEW6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.78■■□□□ 1.24
FAM90A16PA6NEW6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
FAM90A16PA6NEW6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
FAM90A16PA6NEW6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
FAM90A16PA6NEW6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.77■■□□□ 1.24
FAM90A16PA6NEW6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.77■■□□□ 1.24
FAM90A16PA6NEW6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
FAM90A16PA6NEW6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
FAM90A16PA6NEW6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
FAM90A16PA6NEW6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
FAM90A16PA6NEW6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
FAM90A16PA6NEW6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
FAM90A16PA6NEW6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
FAM90A16PA6NEW6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
FAM90A16PA6NEW6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
FAM90A16PA6NEW6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A16PA6NEW6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A16PA6NEW6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A16PA6NEW6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A16PA6NEW6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
FAM90A16PA6NEW6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.72■■□□□ 1.23
FAM90A16PA6NEW6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.72■■□□□ 1.23
FAM90A16PA6NEW6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
FAM90A16PA6NEW6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.71■■□□□ 1.23
FAM90A16PA6NEW6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
FAM90A16PA6NEW6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM90A16PA6NEW6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FAM90A16PA6NEW6 AL161658.1-201ENST00000623641 1967 ntBASIC22.69■■□□□ 1.22
FAM90A16PA6NEW6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM90A16PA6NEW6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FAM90A16PA6NEW6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FAM90A16PA6NEW6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A16PA6NEW6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A16PA6NEW6 ABCB10P3-201ENST00000561950 2166 ntBASIC22.67■■□□□ 1.22
FAM90A16PA6NEW6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A16PA6NEW6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM90A16PA6NEW6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A16PA6NEW6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A16PA6NEW6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A16PA6NEW6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FAM90A16PA6NEW6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
FAM90A16PA6NEW6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FAM90A16PA6NEW6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.63■■□□□ 1.21
FAM90A16PA6NEW6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FAM90A16PA6NEW6 ST7-AS1-201ENST00000456775 1889 ntBASIC22.63■■□□□ 1.21
FAM90A16PA6NEW6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FAM90A16PA6NEW6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FAM90A16PA6NEW6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
FAM90A16PA6NEW6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.62■■□□□ 1.21
FAM90A16PA6NEW6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
FAM90A16PA6NEW6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FAM90A16PA6NEW6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FAM90A16PA6NEW6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FAM90A16PA6NEW6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.6■■□□□ 1.21
FAM90A16PA6NEW6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FAM90A16PA6NEW6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FAM90A16PA6NEW6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FAM90A16PA6NEW6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
FAM90A16PA6NEW6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.57■■□□□ 1.2
FAM90A16PA6NEW6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.57■■□□□ 1.2
FAM90A16PA6NEW6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A16PA6NEW6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A16PA6NEW6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A16PA6NEW6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A16PA6NEW6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A16PA6NEW6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FAM90A16PA6NEW6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM90A16PA6NEW6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
FAM90A16PA6NEW6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM90A16PA6NEW6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM90A16PA6NEW6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM90A16PA6NEW6 AL135925.1-201ENST00000605920 1701 ntBASIC22.51■■□□□ 1.19
FAM90A16PA6NEW6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.51■■□□□ 1.19
FAM90A16PA6NEW6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
FAM90A16PA6NEW6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM90A16PA6NEW6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM90A16PA6NEW6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms